Personal tools

FFCP PHASE1:Mm9::chr5:81450235..81450266,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr5:81450235..81450266,+
|DHSsupport=NA
|short_description=p6@Lphn3
|DPIdataset=NA
|description=CAGE_peak_6_at_Lphn3_5end
|association_with_transcript=0bp_to_ENSMUST00000120128_5end
|EntrezGene=319387
|EntrezGene=319387
|HGNC=
|HGNC=
|MCL_coexpression_id=2430
|TSSclassifier=NA
|UniProt=D3Z6J2
|UniProt=D3Z6J2
|association_with_transcript=0bp_to_ENSMUST00000120128_5end
|cluster_id=chr5:81450235..81450266,+
|description=CAGE_peak_6_at_Lphn3_5end
|id=chr5:81450235..81450266,+
|ontology_enrichment_celltype=CL:0000540!6.86e-12!33;CL:0000047!6.86e-12!33;CL:0000031!6.86e-12!33;CL:0000404!6.86e-12!33;CL:0000117!5.67e-11!23;CL:0000337!5.67e-11!23;CL:0000221!7.10e-10!44;CL:0000133!7.10e-10!44;CL:0002319!1.67e-09!43;CL:0000393!8.09e-09!39;CL:0000211!8.09e-09!39;CL:0000055!7.32e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.63e-15,23;CL:0000337,1.63e-15,23;CL:0000540,1.70e-13,33;CL:0000047,1.70e-13,33;CL:0000031,1.70e-13,33;CL:0000404,1.70e-13,33;CL:0000221,1.32e-12,44;CL:0000133,1.32e-12,44;CL:0002319,5.10e-12,43;CL:0000393,2.77e-10,39;CL:0000211,2.77e-10,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!8.46e-22!102;UBERON:0000924!8.46e-22!102;UBERON:0006601!8.46e-22!102;UBERON:0000073!9.91e-21!75;UBERON:0001016!9.91e-21!75;UBERON:0001017!2.06e-19!73;UBERON:0005743!2.06e-19!73;UBERON:0000033!5.61e-18!63;UBERON:0002346!7.28e-18!71;UBERON:0003075!7.28e-18!71;UBERON:0007284!7.28e-18!71;UBERON:0003056!4.59e-16!49;UBERON:0001049!5.93e-16!52;UBERON:0005068!5.93e-16!52;UBERON:0006241!5.93e-16!52;UBERON:0007135!5.93e-16!52;UBERON:0000955!6.36e-15!50;UBERON:0006238!6.36e-15!50;UBERON:0002616!2.27e-14!49;UBERON:0002020!2.62e-14!34;UBERON:0003080!3.82e-13!40;UBERON:0002780!1.13e-12!39;UBERON:0001890!1.13e-12!39;UBERON:0006240!1.13e-12!39;UBERON:0002791!1.76e-11!29;UBERON:0003528!1.76e-11!29;UBERON:0001893!1.76e-11!29;UBERON:0000153!4.67e-09!94;UBERON:0007811!8.20e-08!86;UBERON:0000468!1.65e-07!333;UBERON:0000956!2.74e-07!21;UBERON:0001869!2.74e-07!21;UBERON:0000203!2.74e-07!21;UBERON:0002619!3.42e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.43e-25,75;UBERON:0004121,4.59e-24,95;UBERON:0000924,4.59e-24,95;UBERON:0006601,4.59e-24,95;UBERON:0000073,3.35e-23,54;UBERON:0001017,4.39e-23,73;UBERON:0002346,1.62e-21,64;UBERON:0003075,1.62e-21,64;UBERON:0007284,1.62e-21,64;UBERON:0001049,1.71e-20,52;UBERON:0005068,1.71e-20,52;UBERON:0006241,1.71e-20,52;UBERON:0007135,1.71e-20,52;UBERON:0010371,1.57e-19,73;UBERON:0003056,5.78e-19,49;UBERON:0002020,7.07e-19,34;UBERON:0000955,1.46e-17,47;UBERON:0006238,1.46e-17,47;UBERON:0002616,1.04e-16,46;UBERON:0003080,2.06e-16,40;UBERON:0002780,1.15e-15,39;UBERON:0001890,1.15e-15,39;UBERON:0006240,1.15e-15,39;UBERON:0003528,2.55e-14,29;UBERON:0002791,2.55e-14,29;UBERON:0001893,2.55e-14,29;UBERON:0010314,2.94e-14,92;UBERON:0000025,4.45e-09,114;UBERON:0002619,6.07e-09,17;UBERON:0004111,6.40e-09,122;UBERON:0002420,9.40e-09,8;UBERON:0007245,9.40e-09,8;UBERON:0010009,9.40e-09,8;UBERON:0010011,9.40e-09,8;UBERON:0000454,9.40e-09,8;UBERON:0000956,8.99e-08,21;UBERON:0001869,8.99e-08,21;UBERON:0000203,8.99e-08,21;UBERON:0011216,1.98e-07,194
|phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0.548457734422955,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0.125896817975577,0.202753862439029,0,0,0,0,1.36100929351998,0.419959264876088,0,0,0,0,0,0.286533439938757,0,1.61853168687678,2.64495489636016,2.53532561402472,0,0,0,0,0,0,0.384218305321555,0.518448061542388,0.405017814995072,0.420649922702764,2.85650984403804,1.76694832761291,1.22490799214954,3.1629005436018,1.83843757322004,1.10115880999389,2.29837208553338,1.22885226604995,1.58263545276233,6.49562269577109,2.6045668527838,1.11673199600552,4.50210088025344,3.81995619442025,3.24091444021034,2.42031857358475,1.86399445825301,2.80186915332781,3.02286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,1.40843419776681,0,0,0,0.216491041011214,0.760079596425296,0.505524445014783,0.22836775943812,0.776813650941515,0,0.520455980298408,0,0.922461989024234,0.301445281105245,0.823120949949934,0.125666591329675,0,0,0,0.485300549842228,0,0,0,1.75668478206928,2.93225389538837,0,0,0,0,1.79748767285787,1.37250180845588,2.76439574648302,2.08589184230732,3.83573185995496,1.24672826735736,2.10913641988085,0.509196819251581,0,0.252722758433675,0.420883711772948,1.56144531555244,0.689706313300419,0.720248519221397,2.10986744970001,2.17716797284249,1.7935920839879,1.03071897015702,2.06962696591213,0.215567992932842,1.13463648100692,0.879755620819744,0.43839146485515,2.78047249225598,0.348252166522167,1.02891068203972,2.9855140022774,0,0,0,0.207125772535502,1.40715635988658,0.540186184383045,0,0.196764231747404,1.23413690309903,0.232533944750408,0.268273401399619,0.116765342367169,0.493679549740441,0.32833492815819,0,0.146199987425332,0.658650345873152,0.134206418760372,1.89260953707715,1.44066457330998,0,0.528901133327089,0.853153002140936,1.39342003116263,0.515469845288373,0.201683524623343,0,0,0,0,1.50801125280162,0.795825888164603,0.19496408711912,0,0.216138049874694,0.597423819763102,0,0.799739588268102,0,1.01825663922657,0.581857461502877,0.631222379012867,0.316182685621286,0.442830443938806,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,1.66277871149944,0.37898282354097,0.162964976442026,0.339490171550376,0.469380496577004,0.837531287209079,0.952174563544055,1.17080188714679,1.89162172927429,4.4292937929755,1.2756381492599,3.11340297959902,1.72684981865896,2.60368305446721,0,0,0.491764273019036,0.275936746304732,0.963303539926752,1.05490517932983,0,0,0.94652465824877,0.780877488593277,0.430846795465598,0.716906393857656,0.668396022247182,1.13230612315533,0,1.46127928955656,1.18586333383957,2.24924921495265,0.283880170416537,1.24645922567079,0.977321756121456,0.659880491890142,0,0.242780636154981,0,0,0,0,0.516856586336442,0.727067458955011,0,0,0,0,0,1.98067203434441,1.16422815404479,0.214337035031592,0.709360934569094,1.07021290561242,2.13913726782757,0.304464949114599,0,0,0,0.65954501176592,0.645857706783622,0.422190474497091,0.477489376012546,0.328281799490123,0.582961673259701,0.556275906031529,0.170870880797853,0.206386867963223,0,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0,1.90934123603023,0.316335993581135,0.203319467126849,1.18805874903981,2.09088296014469,1.09181281873089,0,0.165306911450672,0,0.129614973291793,0,0,0.747582730219894,0.66183396182839,1.55560950675238,1.93739735216597,2.02747350588934,2.34714477291508,0.911430693907651,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0.718976700153791,0.129920822977795,0.179026695667481,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,4.51801474093653,1.38097570952153,0.572895513439397,3.95262319390481,3.42541259885321,1.5107877947794,0.675022500231806,3.15224842256954,0.906284817968409,4.14208249401456,0.93408612825759,0.798049746802062,0.512200817262403,0.243106717068294,0.209613162627982,0.183843508450014,0.666740183404846,0.206035057238894,0.64183841918363,0.252697211763798,0.50695859978048,0.188626341386076,0.561849044819294,0.768301828858431,0.574354689556133,0.952587382566147,1.15884325944855,2.31491064556446,0.824171801606613,0.147198920134397,1.02860775715625,1.06485483695602,0.715308569841963,0.436039249896986,1.12931256498397,0.846146078916765,0.365855945745545,0,0.407412341537585,1.12228454331548,0.593175090620871,0.985044823755635,0.818462086339379,0.77468420592983,0.385813221962283,0.499621155875892,0.935726433781634,0.429742108096597,0.57386499620653,0,0
|phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0.548457734422955,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0.125896817975577,0.202753862439029,0,0,0,0,1.36100929351998,0.419959264876088,0,0,0,0,0,0.286533439938757,0,1.61853168687678,2.64495489636016,2.53532561402472,0,0,0,0,0,0,0.384218305321555,0.518448061542388,0.405017814995072,0.420649922702764,2.85650984403804,1.76694832761291,1.22490799214954,3.1629005436018,1.83843757322004,1.10115880999389,2.29837208553338,1.22885226604995,1.58263545276233,6.49562269577109,2.6045668527838,1.11673199600552,4.50210088025344,3.81995619442025,3.24091444021034,2.42031857358475,1.86399445825301,2.80186915332781,3.02286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,1.40843419776681,0,0,0,0.216491041011214,0.760079596425296,0.505524445014783,0.22836775943812,0.776813650941515,0,0.520455980298408,0,0.922461989024234,0.301445281105245,0.823120949949934,0.125666591329675,0,0,0,0.485300549842228,0,0,0,1.75668478206928,2.93225389538837,0,0,0,0,1.79748767285787,1.37250180845588,2.76439574648302,2.08589184230732,3.83573185995496,1.24672826735736,2.10913641988085,0.509196819251581,0,0.252722758433675,0.420883711772948,1.56144531555244,0.689706313300419,0.720248519221397,2.10986744970001,2.17716797284249,1.7935920839879,1.03071897015702,2.06962696591213,0.215567992932842,1.13463648100692,0.879755620819744,0.43839146485515,2.78047249225598,0.348252166522167,1.02891068203972,2.9855140022774,0,0,0,0.207125772535502,1.40715635988658,0.540186184383045,0,0.196764231747404,1.23413690309903,0.232533944750408,0.268273401399619,0.116765342367169,0.493679549740441,0.32833492815819,0,0.146199987425332,0.658650345873152,0.134206418760372,1.89260953707715,1.44066457330998,0,0.528901133327089,0.853153002140936,1.39342003116263,0.515469845288373,0.201683524623343,0,0,0,0,1.50801125280162,0.795825888164603,0.19496408711912,0,0.216138049874694,0.597423819763102,0,0.799739588268102,0,1.01825663922657,0.581857461502877,0.631222379012867,0.316182685621286,0.442830443938806,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,1.66277871149944,0.37898282354097,0.162964976442026,0.339490171550376,0.469380496577004,0.837531287209079,0.952174563544055,1.17080188714679,1.89162172927429,4.4292937929755,1.2756381492599,3.11340297959902,1.72684981865896,2.60368305446721,0,0,0.491764273019036,0.275936746304732,0.963303539926752,1.05490517932983,0,0,0.94652465824877,0.780877488593277,0.430846795465598,0.716906393857656,0.668396022247182,1.13230612315533,0,1.46127928955656,1.18586333383957,2.24924921495265,0.283880170416537,1.24645922567079,0.977321756121456,0.659880491890142,0,0.242780636154981,0,0,0,0,0.516856586336442,0.727067458955011,0,0,0,0,0,1.98067203434441,1.16422815404479,0.214337035031592,0.709360934569094,1.07021290561242,2.13913726782757,0.304464949114599,0,0,0,0.65954501176592,0.645857706783622,0.422190474497091,0.477489376012546,0.328281799490123,0.582961673259701,0.556275906031529,0.170870880797853,0.206386867963223,0,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0,1.90934123603023,0.316335993581135,0.203319467126849,1.18805874903981,2.09088296014469,1.09181281873089,0,0.165306911450672,0,0.129614973291793,0,0,0.747582730219894,0.66183396182839,1.55560950675238,1.93739735216597,2.02747350588934,2.34714477291508,0.911430693907651,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0.718976700153791,0.129920822977795,0.179026695667481,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,4.51801474093653,1.38097570952153,0.572895513439397,3.95262319390481,3.42541259885321,1.5107877947794,0.675022500231806,3.15224842256954,0.906284817968409,4.14208249401456,0.93408612825759,0.798049746802062,0.512200817262403,0.243106717068294,0.209613162627982,0.183843508450014,0.666740183404846,0.206035057238894,0.64183841918363,0.252697211763798,0.50695859978048,0.188626341386076,0.561849044819294,0.768301828858431,0.574354689556133,0.952587382566147,1.15884325944855,2.31491064556446,0.824171801606613,0.147198920134397,1.02860775715625,1.06485483695602,0.715308569841963,0.436039249896986,1.12931256498397,0.846146078916765,0.365855945745545,0,0.407412341537585,1.12228454331548,0.593175090620871,0.985044823755635,0.818462086339379,0.77468420592983,0.385813221962283,0.499621155875892,0.935726433781634,0.429742108096597,0.57386499620653,0,0
|short_description=p6@Lphn3
}}
}}

Latest revision as of 06:07, 26 September 2015

Short description:p6@Lphn3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Lphn3_5end
Coexpression cluster:MCL_coexpression_mm9:2430
Association with transcript: 0bp_to_ENSMUST00000120128_5end
EntrezGene:Lphn3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Lphn3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.16
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.50
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D92.80
Mouse Schwann, donor2.CNhs12573.11746-123F93.02
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I22.93
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C62.18
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I62.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E51.89
lung, neonate N07.CNhs11111.715-19A34.43
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A43.11
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H22.60
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F52.14
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B72.35
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.95
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.63e-1523
neuroblast (sensu Vertebrata)1.63e-1523
neuron1.70e-1333
neuronal stem cell1.70e-1333
neuroblast1.70e-1333
electrically signaling cell1.70e-1333
ectodermal cell1.32e-1244
neurectodermal cell1.32e-1244
neural cell5.10e-1243
electrically responsive cell2.77e-1039
electrically active cell2.77e-1039

Uber anatomy
Ontology termp-valuen
nervous system4.43e-2575
ectoderm-derived structure4.59e-2495
ectoderm4.59e-2495
presumptive ectoderm4.59e-2495
regional part of nervous system3.35e-2354
central nervous system4.39e-2373
neurectoderm1.62e-2164
neural plate1.62e-2164
presumptive neural plate1.62e-2164
neural tube1.71e-2052
neural rod1.71e-2052
future spinal cord1.71e-2052
neural keel1.71e-2052
ecto-epithelium1.57e-1973
pre-chordal neural plate5.78e-1949
gray matter7.07e-1934
brain1.46e-1747
future brain1.46e-1747
regional part of brain1.04e-1646
anterior neural tube2.06e-1640
regional part of forebrain1.15e-1539
forebrain1.15e-1539
future forebrain1.15e-1539
brain grey matter2.55e-1429
regional part of telencephalon2.55e-1429
telencephalon2.55e-1429
structure with developmental contribution from neural crest2.94e-1492
tube4.45e-09114
regional part of cerebral cortex6.07e-0917
anatomical conduit6.40e-09122
basal ganglion9.40e-098
nuclear complex of neuraxis9.40e-098
aggregate regional part of brain9.40e-098
collection of basal ganglia9.40e-098
cerebral subcortex9.40e-098
cerebral cortex8.99e-0821
cerebral hemisphere8.99e-0821
pallium8.99e-0821
organ system subdivision1.98e-07194
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:81450235..81450266,%2B&oldid=4237367"