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FFCP PHASE1:Mm9::chr11:56825334..56825345,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14799
|EntrezGene=14799
|HGNC=
|HGNC=
|MCL_coexpression_id=362
|TSSclassifier=NA
|UniProt=P23818
|UniProt=P23818
|association_with_transcript=22bp_to_ENSMUST00000036315_5end
|association_with_transcript=22bp_to_ENSMUST00000036315_5end
|cluster_id=chr11:56825334..56825345,+
|description=CAGE_peak_3_at_Gria1_5end
|description=CAGE_peak_3_at_Gria1_5end
|id=chr11:56825334..56825345,+
|id=chr11:56825334..56825345,+
|ontology_enrichment_celltype=CL:0000117!2.44e-13!23;CL:0000337!2.44e-13!23;CL:0000540!1.19e-07!33;CL:0000047!1.19e-07!33;CL:0000031!1.19e-07!33;CL:0000404!1.19e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.93e-25,23;CL:0000337,2.93e-25,23;CL:0000540,6.25e-16,33;CL:0000047,6.25e-16,33;CL:0000031,6.25e-16,33;CL:0000404,6.25e-16,33;CL:0002319,1.41e-13,43;CL:0000221,3.88e-13,44;CL:0000133,3.88e-13,44;CL:0000393,1.17e-12,39;CL:0000211,1.17e-12,39;CL:0002609,3.17e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!6.33e-25!52;UBERON:0005068!6.33e-25!52;UBERON:0006241!6.33e-25!52;UBERON:0007135!6.33e-25!52;UBERON:0000955!3.26e-24!50;UBERON:0006238!3.26e-24!50;UBERON:0002616!2.60e-23!49;UBERON:0000033!2.84e-23!63;UBERON:0001017!7.33e-23!73;UBERON:0005743!7.33e-23!73;UBERON:0002020!1.54e-22!34;UBERON:0000073!1.44e-21!75;UBERON:0001016!1.44e-21!75;UBERON:0002346!1.49e-21!71;UBERON:0003075!1.49e-21!71;UBERON:0007284!1.49e-21!71;UBERON:0003056!3.51e-21!49;UBERON:0003080!6.44e-20!40;UBERON:0002791!2.19e-19!29;UBERON:0003528!2.19e-19!29;UBERON:0001893!2.19e-19!29;UBERON:0002780!4.53e-19!39;UBERON:0001890!4.53e-19!39;UBERON:0006240!4.53e-19!39;UBERON:0004121!8.18e-16!102;UBERON:0000924!8.18e-16!102;UBERON:0006601!8.18e-16!102;UBERON:0000956!1.25e-15!21;UBERON:0001869!1.25e-15!21;UBERON:0000203!1.25e-15!21;UBERON:0002619!2.73e-13!17;UBERON:0000025!1.92e-12!114;UBERON:0004111!3.88e-12!122;UBERON:0007811!4.40e-12!86;UBERON:0000153!8.97e-10!94;UBERON:0002021!3.49e-09!10;UBERON:0000411!3.49e-09!10;UBERON:0001950!3.49e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.55e-51,54;UBERON:0001049,1.09e-47,52;UBERON:0005068,1.09e-47,52;UBERON:0006241,1.09e-47,52;UBERON:0007135,1.09e-47,52;UBERON:0001017,2.31e-45,73;UBERON:0002020,4.92e-45,34;UBERON:0001016,7.57e-44,75;UBERON:0000955,3.17e-41,47;UBERON:0006238,3.17e-41,47;UBERON:0002616,2.24e-39,46;UBERON:0002346,9.51e-39,64;UBERON:0003075,9.51e-39,64;UBERON:0007284,9.51e-39,64;UBERON:0003528,3.10e-38,29;UBERON:0002791,3.10e-38,29;UBERON:0001893,3.10e-38,29;UBERON:0003080,1.72e-35,40;UBERON:0004121,8.49e-34,95;UBERON:0000924,8.49e-34,95;UBERON:0006601,8.49e-34,95;UBERON:0002780,9.78e-34,39;UBERON:0001890,9.78e-34,39;UBERON:0006240,9.78e-34,39;UBERON:0010371,1.21e-32,73;UBERON:0003056,2.75e-29,49;UBERON:0000956,3.24e-29,21;UBERON:0001869,3.24e-29,21;UBERON:0000203,3.24e-29,21;UBERON:0002619,3.71e-24,17;UBERON:0010314,1.09e-23,92;UBERON:0000025,3.51e-18,114;UBERON:0002021,6.52e-18,10;UBERON:0000411,6.52e-18,10;UBERON:0001950,6.52e-18,10;UBERON:0004111,2.79e-16,122;UBERON:0003076,9.51e-12,12;UBERON:0003057,9.51e-12,12;UBERON:0011216,2.27e-11,194;UBERON:0002420,6.92e-10,8;UBERON:0007245,6.92e-10,8;UBERON:0010009,6.92e-10,8;UBERON:0010011,6.92e-10,8;UBERON:0000454,6.92e-10,8;UBERON:0000483,6.66e-09,174;UBERON:0002240,7.46e-09,6;UBERON:0005174,7.46e-09,6;UBERON:0001137,7.46e-09,6;UBERON:0000119,1.11e-08,176;UBERON:0001954,5.37e-08,7;UBERON:0003022,5.37e-08,7;UBERON:0002421,5.37e-08,7;UBERON:0000349,5.37e-08,7;UBERON:0002600,5.37e-08,7;UBERON:0002950,8.26e-08,4;UBERON:0001891,8.26e-08,4;UBERON:0009616,8.26e-08,4;UBERON:0010286,8.26e-08,4;UBERON:0001948,1.25e-07,5;UBERON:0002315,1.25e-07,5
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,1.74986909166855,0.139986421625363,1.43752564364972,0,0,0,0,0,0.515672092277442,0.809265843438391,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0,1.45165457231869,1.35005938331691,1.26194976810829,1.99955689082663,1.10434270475807,2.08234358665422,1.34183659425531,1.83843757322004,5.50579404996943,6.63974158042976,5.06901559745603,1.58263545276233,1.73826522844578,0,2.51264699101243,6.19038871034848,6.57032465440283,3.24091444021034,1.70846016958924,2.60959224155421,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,5.27005434620785,5.44561437714983,0,0,0,0,8.98743836428936,9.15001205637253,3.76963056338593,7.64827008846016,7.92717917724025,5.81806524766768,8.76102820565891,0.101839363850316,0,0,0.841767423545896,0.130120442962704,0.229902104433473,0,0.150704817835715,0.476255494059295,0.384341160854549,0.749613796477831,1.55222022443409,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.473489471170421,0.196764231747404,0.462801338662135,0.465067889500816,0.268273401399619,0.233530684734339,0.329119699826961,0,0.0810688095458557,0,0,0.134206418760372,23.5524742391823,4.01327988279209,0,0,0.213288250535234,0,0.515469845288373,0,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0,0,0,0,0.238043640886014,0,0.157635144106191,0.44292937929755,0.956728611944923,3.11340297959902,0.863424909329478,1.15719246865209,0,0,0,0,2.88991061978026,4.10240903072711,0.491804836130026,0,0,0,0.215423397732799,0,0,0,0,0,0,18.315315036043,0.425820255624806,0.178065603667255,0.162886959353576,0.494910368917606,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,1.36175842301515,0.36012218806262,0,0,0.177340233642274,0,0.493647061806363,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0.750729901804728,1.46521299413812,0.428736758158132,0,5.64751842617067,9.66682996665071,7.44764167471216,5.32744865265431,6.16574267793578,7.55393897389701,6.75022500231806,9.00642406448441,7.25027854374727,5.69536342927002,0,0,0.341467211508268,0.243106717068294,0.209613162627982,0.183843508450014,0.666740183404846,0.206035057238894,0,0,0.760437899670719,0.377252682772152,0.561849044819294,0.448176066834085,0.574354689556133,0.952587382566147,0.579421629724277,0,0,0.441596760403192,0.342869252385415,0.532427418478012,0.476872379894642,0.726732083161643,0.564656282491984,0.338458431566706,0.548783918618318,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0.492522411877817,0,0.464810523557898,0.192906610981141,1.74867404556562,0,0.429742108096597,0,0,0
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,1.74986909166855,0.139986421625363,1.43752564364972,0,0,0,0,0,0.515672092277442,0.809265843438391,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0,1.45165457231869,1.35005938331691,1.26194976810829,1.99955689082663,1.10434270475807,2.08234358665422,1.34183659425531,1.83843757322004,5.50579404996943,6.63974158042976,5.06901559745603,1.58263545276233,1.73826522844578,0,2.51264699101243,6.19038871034848,6.57032465440283,3.24091444021034,1.70846016958924,2.60959224155421,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,5.27005434620785,5.44561437714983,0,0,0,0,8.98743836428936,9.15001205637253,3.76963056338593,7.64827008846016,7.92717917724025,5.81806524766768,8.76102820565891,0.101839363850316,0,0,0.841767423545896,0.130120442962704,0.229902104433473,0,0.150704817835715,0.476255494059295,0.384341160854549,0.749613796477831,1.55222022443409,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.473489471170421,0.196764231747404,0.462801338662135,0.465067889500816,0.268273401399619,0.233530684734339,0.329119699826961,0,0.0810688095458557,0,0,0.134206418760372,23.5524742391823,4.01327988279209,0,0,0.213288250535234,0,0.515469845288373,0,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0,0,0,0,0.238043640886014,0,0.157635144106191,0.44292937929755,0.956728611944923,3.11340297959902,0.863424909329478,1.15719246865209,0,0,0,0,2.88991061978026,4.10240903072711,0.491804836130026,0,0,0,0.215423397732799,0,0,0,0,0,0,18.315315036043,0.425820255624806,0.178065603667255,0.162886959353576,0.494910368917606,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,1.36175842301515,0.36012218806262,0,0,0.177340233642274,0,0.493647061806363,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0.750729901804728,1.46521299413812,0.428736758158132,0,5.64751842617067,9.66682996665071,7.44764167471216,5.32744865265431,6.16574267793578,7.55393897389701,6.75022500231806,9.00642406448441,7.25027854374727,5.69536342927002,0,0,0.341467211508268,0.243106717068294,0.209613162627982,0.183843508450014,0.666740183404846,0.206035057238894,0,0,0.760437899670719,0.377252682772152,0.561849044819294,0.448176066834085,0.574354689556133,0.952587382566147,0.579421629724277,0,0,0.441596760403192,0.342869252385415,0.532427418478012,0.476872379894642,0.726732083161643,0.564656282491984,0.338458431566706,0.548783918618318,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0.492522411877817,0,0.464810523557898,0.192906610981141,1.74867404556562,0,0.429742108096597,0,0,0
|short_description=p3@Gria1
|short_description=p3@Gria1
}}
}}

Latest revision as of 18:01, 1 October 2015

Short description:p3@Gria1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Gria1_5end
Coexpression cluster:MCL_coexpression_mm9:362
Association with transcript: 22bp_to_ENSMUST00000036315_5end
EntrezGene:Gria1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Gria1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.08
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.57
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.27
cerebellum, neonate N30.CNhs11135.1395-42I25.45
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A48.99
corpus striatum, adult.CNhs10487.19-21D89.15
corpus striatum, neonate N00.CNhs11226.630-43F13.77
cortex, adult.CNhs10473.12-14D57.65
cortex, neonate N30.CNhs11107.1392-42F27.93
diencephalon, adult.CNhs10482.20-12F25.82
diencephalon, neonate N30.CNhs11201.1388-42B28.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E823.55
hippocampus, neonate N00.CNhs11228.627-43G14.01
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A43.11
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.89
medulla oblongata, neonate N30.CNhs11200.1396-42A34.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I918.32
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A37.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.33
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.55e-5154
neural tube1.09e-4752
neural rod1.09e-4752
future spinal cord1.09e-4752
neural keel1.09e-4752
central nervous system2.31e-4573
gray matter4.92e-4534
nervous system7.57e-4475
brain3.17e-4147
future brain3.17e-4147
regional part of brain2.24e-3946
neurectoderm9.51e-3964
neural plate9.51e-3964
presumptive neural plate9.51e-3964
brain grey matter3.10e-3829
regional part of telencephalon3.10e-3829
telencephalon3.10e-3829
anterior neural tube1.72e-3540
ectoderm-derived structure8.49e-3495
ectoderm8.49e-3495
presumptive ectoderm8.49e-3495
regional part of forebrain9.78e-3439
forebrain9.78e-3439
future forebrain9.78e-3439
ecto-epithelium1.21e-3273
pre-chordal neural plate2.75e-2949
cerebral cortex3.24e-2921
cerebral hemisphere3.24e-2921
pallium3.24e-2921
regional part of cerebral cortex3.71e-2417
structure with developmental contribution from neural crest1.09e-2392
tube3.51e-18114
occipital lobe6.52e-1810
visual cortex6.52e-1810
neocortex6.52e-1810
anatomical conduit2.79e-16122
posterior neural tube9.51e-1212
chordal neural plate9.51e-1212
organ system subdivision2.27e-11194
basal ganglion6.92e-108
nuclear complex of neuraxis6.92e-108
aggregate regional part of brain6.92e-108
collection of basal ganglia6.92e-108
cerebral subcortex6.92e-108
epithelium6.66e-09174
spinal cord7.46e-096
dorsal region element7.46e-096
dorsum7.46e-096
cell layer1.11e-08176
Ammon's horn5.37e-087
lobe parts of cerebral cortex5.37e-087
hippocampal formation5.37e-087
limbic system5.37e-087
limbic lobe5.37e-087
regional part of midbrain8.26e-084
midbrain8.26e-084
presumptive midbrain8.26e-084
midbrain neural tube8.26e-084
regional part of spinal cord1.25e-075
gray matter of spinal cord1.25e-075
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