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FFCP PHASE1:Mm9::chr12:112615916..112615930,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=217866
|EntrezGene=217866
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q7TT50,B2RQQ7
|UniProt=Q7TT50,B2RQQ7
|association_with_transcript=0bp_to_ENSMUST00000041965,NM_183016,uc007pct.2_5end
|association_with_transcript=0bp_to_ENSMUST00000041965,NM_183016,uc007pct.2_5end
|cluster_id=chr12:112615916..112615930,-
|description=CAGE_peak_4_at_Cdc42bpb_5end
|description=CAGE_peak_4_at_Cdc42bpb_5end
|id=chr12:112615916..112615930,-
|id=chr12:112615916..112615930,-
|ontology_enrichment_celltype=CL:0000117!1.06e-07!23;CL:0000337!1.06e-07!23
|ontology_enrichment_celltype=CL:0000117!1.06e-07!23;CL:0000337!1.06e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.37e-10,23;CL:0000337,2.37e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003056!2.92e-19!49;UBERON:0003080!3.53e-19!40;UBERON:0002346!6.29e-19!71;UBERON:0003075!6.29e-19!71;UBERON:0007284!6.29e-19!71;UBERON:0001049!7.09e-19!52;UBERON:0005068!7.09e-19!52;UBERON:0006241!7.09e-19!52;UBERON:0007135!7.09e-19!52;UBERON:0002780!1.28e-18!39;UBERON:0001890!1.28e-18!39;UBERON:0006240!1.28e-18!39;UBERON:0000955!1.52e-16!50;UBERON:0006238!1.52e-16!50;UBERON:0002616!2.39e-16!49;UBERON:0002020!6.49e-16!34;UBERON:0000033!1.77e-15!63;UBERON:0002791!3.59e-14!29;UBERON:0003528!3.59e-14!29;UBERON:0001893!3.59e-14!29;UBERON:0004121!5.67e-14!102;UBERON:0000924!5.67e-14!102;UBERON:0006601!5.67e-14!102;UBERON:0001017!3.93e-13!73;UBERON:0005743!3.93e-13!73;UBERON:0000073!1.20e-12!75;UBERON:0001016!1.20e-12!75;UBERON:0000956!6.64e-10!21;UBERON:0001869!6.64e-10!21;UBERON:0000203!6.64e-10!21;UBERON:0000025!1.81e-08!114;UBERON:0002619!7.78e-08!17;UBERON:0000468!1.51e-07!333;UBERON:0004111!4.51e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0003080,3.67e-26,40;UBERON:0002780,2.95e-25,39;UBERON:0001890,2.95e-25,39;UBERON:0006240,2.95e-25,39;UBERON:0000073,6.02e-23,54;UBERON:0003056,6.47e-23,49;UBERON:0001049,6.99e-23,52;UBERON:0005068,6.99e-23,52;UBERON:0006241,6.99e-23,52;UBERON:0007135,6.99e-23,52;UBERON:0002616,4.28e-21,46;UBERON:0002020,4.62e-21,34;UBERON:0000955,2.21e-20,47;UBERON:0006238,2.21e-20,47;UBERON:0002346,3.22e-19,64;UBERON:0003075,3.22e-19,64;UBERON:0007284,3.22e-19,64;UBERON:0003528,9.22e-19,29;UBERON:0002791,9.22e-19,29;UBERON:0001893,9.22e-19,29;UBERON:0010371,7.41e-18,73;UBERON:0001017,1.61e-15,73;UBERON:0001016,9.76e-15,75;UBERON:0004121,6.19e-13,95;UBERON:0000924,6.19e-13,95;UBERON:0006601,6.19e-13,95;UBERON:0010314,6.37e-13,92;UBERON:0000956,6.93e-13,21;UBERON:0001869,6.93e-13,21;UBERON:0000203,6.93e-13,21;UBERON:0002619,1.37e-09,17;UBERON:0000025,4.78e-09,114;UBERON:0004111,1.45e-07,122;UBERON:0001894,2.48e-07,10;UBERON:0006222,2.48e-07,10;UBERON:0002420,3.91e-07,8;UBERON:0007245,3.91e-07,8;UBERON:0010009,3.91e-07,8;UBERON:0010011,3.91e-07,8;UBERON:0000454,3.91e-07,8;UBERON:0002021,8.55e-07,10;UBERON:0000411,8.55e-07,10;UBERON:0001950,8.55e-07,10
|phase1_expression=0.480446541314382,0.348975407639361,0,0,0,0,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0.159992422793407,0,0,0,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.183546752161682,0,0,0.219686182734472,0.58328969722285,0.279972843250725,1.43752564364972,0,0,0,0,0.573066879877513,0.515672092277442,2.63011399117477,0,0.633831403506179,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0,1.55534418462716,1.4850653216486,3.36519938162211,1.99955689082663,1.10434270475807,2.08234358665422,2.1086003624012,1.83843757322004,0,0.766124028511126,1.68967186581868,2.50583946687368,2.92760459527711,2.6045668527838,0.837548997004143,3.93933827022176,1.83357897332172,0.589257170947335,2.42031857358475,2.23679334990361,0.454357159999104,0.151143120213571,0.289864488701678,0,0,0,0,0.448026887097336,0.140444420131752,0,0,0.35333957451034,0.422530259330042,0,0,0,0,0,0,0.22836775943812,0,0.890652834388949,1.73485326766136,1.21786191324856,0.691846491768175,0.150722640552623,0.823120949949934,0.879666139307728,0,0.433798070759735,0,0.485300549842228,0.220841518460394,0.484875253135222,0,0.878342391034642,0.41889341362691,0.255457055208591,0,0,0,1.9472783122627,2.28750301409313,2.63874139437015,5.04090528557602,4.34716277461562,1.87009240103604,2.92034273521964,1.73126918545538,0,0,0,0.780722657776222,1.60931473103431,0.900310649026746,0.90422890701429,1.56483948048054,0.896796041993948,1.03071897015702,0.517406741478031,1.07783996466421,0.567318240503458,0.879755620819744,1.09597866213787,1.39023624612799,1.0447564995665,1.4404749548556,1.59227413454795,0,0,0,0.621377317606506,1.17263029990548,0.720248245844059,1.65721314909647,0.787056926989615,1.3884040159864,0.232533944750408,0.804820204198858,0.233530684734339,0.493679549740441,0.656669856316381,0.648550476366846,0.584799949701329,0.878200461164203,0.402619256281115,4.6263788684108,4.21908910755066,0,0.264450566663544,1.70630600428187,0.928946687441754,1.03093969057675,1.00841762311671,0.444756087689741,0,0,0.658795818896044,0.754005626400808,0.994782360205754,0.58489226135736,0.898819408654221,0.864552199498777,0.398282546508734,1.32767530667157,0.571242563048644,0,0.610953983535943,0.775809948670503,0.701358198903186,0.758838445491087,0.147610147979602,0.470996183524124,0.246794327843601,0,0.166845105716094,0.786235980452812,0.224862112384854,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,1.32643988239339,0.325929952884052,0.678980343100753,1.17345124144251,0.670025029767263,0.952174563544055,1.56106918286239,1.10344600874334,2.43611158613652,1.59454768657487,0.81931657357869,0.863424909329478,0.578596234326046,0,0,0.983528546038072,0,0.963303539926752,0.703270119553219,0.327869890753351,0,0,0.390438744296638,0.646270193198397,0,0,0.566153061577665,0.404810701674894,0.292255857911312,0,0.963963949265421,0.425820255624806,1.6025904330053,2.44330439030364,0.659880491890142,0,0.485561272309963,0.302323556964751,0.377210159511796,0.590603785761546,0,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,0,0,0.680879211507576,1.98067203434441,1.94038025674132,2.14337035031592,1.77340233642274,3.0322698992352,1.15184314421485,1.2178597964584,0.23467170806371,1.0591603543191,0.441056796109924,1.31909002353184,1.45317984026315,1.02531972377865,0.835606408021955,0.656563598980245,0,0.927126510052548,0,1.03193433981611,0.555583582109135,0.188368457004691,0,0,0,0.139951452323658,0.276399947608848,0,1.42351197111511,1.21991680276109,0.756037385752609,1.04544148007234,0.436725127492355,0.404593039154462,0.743881101528023,0.26175594198403,0.129614973291793,0,0.56369293868419,1.64468200648377,1.98550188548517,0.583353565032143,0.904118764344118,0.337912250981556,1.17357238645754,0.651021924219751,2.09718688851422,1.44950472495604,0.864090018773596,0,0,0.410843828659309,0.129920822977795,0.358053391334963,0,0.360586348559907,0,0.403865799792591,0.15241361331,0,0.0974578807397524,0,0,0.226730383615211,1.33191572024439,0.986852422704233,1.00730769818447,0.386379188064381,0.375364950902364,0.73260649706906,0,0,5.0827665835536,0.920650473014354,3.43737308063638,3.43706364687375,1.37016503954128,0.755393897389701,2.02506750069542,1.80128481289688,3.62513927187364,2.5888015587591,1.3492355185943,1.99512436700516,1.53660245178721,1.21553358534147,1.46729213839588,0.551530525350042,0.44449345560323,1.85431551515005,1.92551525755089,0.252697211763798,0.760437899670719,1.13175804831646,0.749132059759059,0.448176066834085,0.804096565378586,0.952587382566147,0.695305955669133,1.15745532278223,2.47251540481984,0.147198920134397,0.685738504770831,0.354951612318675,0.715308569841963,1.88950341622027,0.658765662907314,0.846146078916765,1.28049581010941,0,0.679020569229309,0,0.593175090620871,0.985044823755635,1.63692417267876,0.77468420592983,0.964533054905707,1.24905288968973,0.233931608445408,0.644613162144895,0.57386499620653,0.220591419119515,0.231867835620421
|phase1_expression=0.480446541314382,0.348975407639361,0,0,0,0,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0.159992422793407,0,0,0,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.183546752161682,0,0,0.219686182734472,0.58328969722285,0.279972843250725,1.43752564364972,0,0,0,0,0.573066879877513,0.515672092277442,2.63011399117477,0,0.633831403506179,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0,1.55534418462716,1.4850653216486,3.36519938162211,1.99955689082663,1.10434270475807,2.08234358665422,2.1086003624012,1.83843757322004,0,0.766124028511126,1.68967186581868,2.50583946687368,2.92760459527711,2.6045668527838,0.837548997004143,3.93933827022176,1.83357897332172,0.589257170947335,2.42031857358475,2.23679334990361,0.454357159999104,0.151143120213571,0.289864488701678,0,0,0,0,0.448026887097336,0.140444420131752,0,0,0.35333957451034,0.422530259330042,0,0,0,0,0,0,0.22836775943812,0,0.890652834388949,1.73485326766136,1.21786191324856,0.691846491768175,0.150722640552623,0.823120949949934,0.879666139307728,0,0.433798070759735,0,0.485300549842228,0.220841518460394,0.484875253135222,0,0.878342391034642,0.41889341362691,0.255457055208591,0,0,0,1.9472783122627,2.28750301409313,2.63874139437015,5.04090528557602,4.34716277461562,1.87009240103604,2.92034273521964,1.73126918545538,0,0,0,0.780722657776222,1.60931473103431,0.900310649026746,0.90422890701429,1.56483948048054,0.896796041993948,1.03071897015702,0.517406741478031,1.07783996466421,0.567318240503458,0.879755620819744,1.09597866213787,1.39023624612799,1.0447564995665,1.4404749548556,1.59227413454795,0,0,0,0.621377317606506,1.17263029990548,0.720248245844059,1.65721314909647,0.787056926989615,1.3884040159864,0.232533944750408,0.804820204198858,0.233530684734339,0.493679549740441,0.656669856316381,0.648550476366846,0.584799949701329,0.878200461164203,0.402619256281115,4.6263788684108,4.21908910755066,0,0.264450566663544,1.70630600428187,0.928946687441754,1.03093969057675,1.00841762311671,0.444756087689741,0,0,0.658795818896044,0.754005626400808,0.994782360205754,0.58489226135736,0.898819408654221,0.864552199498777,0.398282546508734,1.32767530667157,0.571242563048644,0,0.610953983535943,0.775809948670503,0.701358198903186,0.758838445491087,0.147610147979602,0.470996183524124,0.246794327843601,0,0.166845105716094,0.786235980452812,0.224862112384854,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,1.32643988239339,0.325929952884052,0.678980343100753,1.17345124144251,0.670025029767263,0.952174563544055,1.56106918286239,1.10344600874334,2.43611158613652,1.59454768657487,0.81931657357869,0.863424909329478,0.578596234326046,0,0,0.983528546038072,0,0.963303539926752,0.703270119553219,0.327869890753351,0,0,0.390438744296638,0.646270193198397,0,0,0.566153061577665,0.404810701674894,0.292255857911312,0,0.963963949265421,0.425820255624806,1.6025904330053,2.44330439030364,0.659880491890142,0,0.485561272309963,0.302323556964751,0.377210159511796,0.590603785761546,0,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,0,0,0.680879211507576,1.98067203434441,1.94038025674132,2.14337035031592,1.77340233642274,3.0322698992352,1.15184314421485,1.2178597964584,0.23467170806371,1.0591603543191,0.441056796109924,1.31909002353184,1.45317984026315,1.02531972377865,0.835606408021955,0.656563598980245,0,0.927126510052548,0,1.03193433981611,0.555583582109135,0.188368457004691,0,0,0,0.139951452323658,0.276399947608848,0,1.42351197111511,1.21991680276109,0.756037385752609,1.04544148007234,0.436725127492355,0.404593039154462,0.743881101528023,0.26175594198403,0.129614973291793,0,0.56369293868419,1.64468200648377,1.98550188548517,0.583353565032143,0.904118764344118,0.337912250981556,1.17357238645754,0.651021924219751,2.09718688851422,1.44950472495604,0.864090018773596,0,0,0.410843828659309,0.129920822977795,0.358053391334963,0,0.360586348559907,0,0.403865799792591,0.15241361331,0,0.0974578807397524,0,0,0.226730383615211,1.33191572024439,0.986852422704233,1.00730769818447,0.386379188064381,0.375364950902364,0.73260649706906,0,0,5.0827665835536,0.920650473014354,3.43737308063638,3.43706364687375,1.37016503954128,0.755393897389701,2.02506750069542,1.80128481289688,3.62513927187364,2.5888015587591,1.3492355185943,1.99512436700516,1.53660245178721,1.21553358534147,1.46729213839588,0.551530525350042,0.44449345560323,1.85431551515005,1.92551525755089,0.252697211763798,0.760437899670719,1.13175804831646,0.749132059759059,0.448176066834085,0.804096565378586,0.952587382566147,0.695305955669133,1.15745532278223,2.47251540481984,0.147198920134397,0.685738504770831,0.354951612318675,0.715308569841963,1.88950341622027,0.658765662907314,0.846146078916765,1.28049581010941,0,0.679020569229309,0,0.593175090620871,0.985044823755635,1.63692417267876,0.77468420592983,0.964533054905707,1.24905288968973,0.233931608445408,0.644613162144895,0.57386499620653,0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|short_description=p4@Cdc42bpb
|short_description=p4@Cdc42bpb
}}
}}

Latest revision as of 08:25, 26 September 2015

Short description:p4@Cdc42bpb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Cdc42bpb_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000041965, NM_183016, uc007pct.2_5end
EntrezGene:Cdc42bpb
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Cdc42bpb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.08
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.11
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.95
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D55.04
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B22.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E84.63
hippocampus, neonate N00.CNhs11228.627-43G14.22
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D50.76
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F63.03
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H31.03
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D92.10
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.99
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.37e-1023
neuroblast (sensu Vertebrata)2.37e-1023

Uber anatomy
Ontology termp-valuen
anterior neural tube3.67e-2640
regional part of forebrain2.95e-2539
forebrain2.95e-2539
future forebrain2.95e-2539
regional part of nervous system6.02e-2354
pre-chordal neural plate6.47e-2349
neural tube6.99e-2352
neural rod6.99e-2352
future spinal cord6.99e-2352
neural keel6.99e-2352
regional part of brain4.28e-2146
gray matter4.62e-2134
brain2.21e-2047
future brain2.21e-2047
neurectoderm3.22e-1964
neural plate3.22e-1964
presumptive neural plate3.22e-1964
brain grey matter9.22e-1929
regional part of telencephalon9.22e-1929
telencephalon9.22e-1929
ecto-epithelium7.41e-1873
central nervous system1.61e-1573
nervous system9.76e-1575
ectoderm-derived structure6.19e-1395
ectoderm6.19e-1395
presumptive ectoderm6.19e-1395
structure with developmental contribution from neural crest6.37e-1392
cerebral cortex6.93e-1321
cerebral hemisphere6.93e-1321
pallium6.93e-1321
regional part of cerebral cortex1.37e-0917
tube4.78e-09114
anatomical conduit1.45e-07122
diencephalon2.48e-0710
future diencephalon2.48e-0710
basal ganglion3.91e-078
nuclear complex of neuraxis3.91e-078
aggregate regional part of brain3.91e-078
collection of basal ganglia3.91e-078
cerebral subcortex3.91e-078
occipital lobe8.55e-0710
visual cortex8.55e-0710
neocortex8.55e-0710
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