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FFCP PHASE1:Mm9::chr12:17183380..17183393,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=382571
|EntrezGene=382571
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=E9PYC0,Q7TSH7
|UniProt=E9PYC0,Q7TSH7
|association_with_transcript=300bp_to_ENSMUST00000170580,NM_201531,uc007ncn.2_5end
|association_with_transcript=300bp_to_ENSMUST00000170580,NM_201531,uc007ncn.2_5end
|cluster_id=chr12:17183380..17183393,-
|description=CAGE_peak_2_at_Kcnf1_5end
|description=CAGE_peak_2_at_Kcnf1_5end
|id=chr12:17183380..17183393,-
|id=chr12:17183380..17183393,-
|ontology_enrichment_celltype=CL:0000117!9.29e-14!23;CL:0000337!9.29e-14!23;CL:0000540!3.21e-08!33;CL:0000047!3.21e-08!33;CL:0000031!3.21e-08!33;CL:0000404!3.21e-08!33;CL:0000221!2.61e-07!44;CL:0000133!2.61e-07!44;CL:0002319!5.31e-07!43
|ontology_enrichment_celltype=CL:0000117!9.29e-14!23;CL:0000337!9.29e-14!23;CL:0000540!3.21e-08!33;CL:0000047!3.21e-08!33;CL:0000031!3.21e-08!33;CL:0000404!3.21e-08!33;CL:0000221!2.61e-07!44;CL:0000133!2.61e-07!44;CL:0002319!5.31e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,2.45e-11,23;CL:0000337,2.45e-11,23;CL:0002610,1.80e-07,3;CL:0000540,3.54e-07,33;CL:0000047,3.54e-07,33;CL:0000031,3.54e-07,33;CL:0000404,3.54e-07,33;CL:0002613,4.77e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!4.93e-22!34;UBERON:0001049!5.13e-20!52;UBERON:0005068!5.13e-20!52;UBERON:0006241!5.13e-20!52;UBERON:0007135!5.13e-20!52;UBERON:0000955!1.36e-19!50;UBERON:0006238!1.36e-19!50;UBERON:0002791!5.11e-19!29;UBERON:0003528!5.11e-19!29;UBERON:0001893!5.11e-19!29;UBERON:0002616!9.24e-19!49;UBERON:0001017!9.41e-19!73;UBERON:0005743!9.41e-19!73;UBERON:0000073!1.33e-18!75;UBERON:0001016!1.33e-18!75;UBERON:0000033!2.26e-18!63;UBERON:0003080!4.11e-18!40;UBERON:0002780!1.81e-17!39;UBERON:0001890!1.81e-17!39;UBERON:0006240!1.81e-17!39;UBERON:0003056!3.26e-17!49;UBERON:0002346!1.26e-15!71;UBERON:0003075!1.26e-15!71;UBERON:0007284!1.26e-15!71;UBERON:0004121!1.13e-14!102;UBERON:0000924!1.13e-14!102;UBERON:0006601!1.13e-14!102;UBERON:0000956!1.15e-13!21;UBERON:0001869!1.15e-13!21;UBERON:0000203!1.15e-13!21;UBERON:0002619!2.67e-12!17;UBERON:0007811!1.26e-11!86;UBERON:0000153!5.71e-10!94;UBERON:0002021!1.49e-09!10;UBERON:0000411!1.49e-09!10;UBERON:0001950!1.49e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.14e-30,34;UBERON:0003528,8.06e-30,29;UBERON:0002791,8.06e-30,29;UBERON:0001893,8.06e-30,29;UBERON:0000073,4.51e-29,54;UBERON:0003080,2.16e-27,40;UBERON:0002780,8.66e-26,39;UBERON:0001890,8.66e-26,39;UBERON:0006240,8.66e-26,39;UBERON:0002021,3.43e-25,10;UBERON:0000411,3.43e-25,10;UBERON:0001950,3.43e-25,10;UBERON:0000955,5.94e-25,47;UBERON:0006238,5.94e-25,47;UBERON:0001049,1.28e-23,52;UBERON:0005068,1.28e-23,52;UBERON:0006241,1.28e-23,52;UBERON:0007135,1.28e-23,52;UBERON:0001017,1.72e-23,73;UBERON:0002616,4.37e-23,46;UBERON:0001016,1.11e-22,75;UBERON:0003056,2.49e-21,49;UBERON:0002619,7.82e-20,17;UBERON:0000956,2.56e-18,21;UBERON:0001869,2.56e-18,21;UBERON:0000203,2.56e-18,21;UBERON:0002346,4.52e-18,64;UBERON:0003075,4.52e-18,64;UBERON:0007284,4.52e-18,64;UBERON:0004121,8.42e-18,95;UBERON:0000924,8.42e-18,95;UBERON:0006601,8.42e-18,95;UBERON:0010371,4.12e-15,73;UBERON:0002420,6.14e-13,8;UBERON:0007245,6.14e-13,8;UBERON:0010009,6.14e-13,8;UBERON:0010011,6.14e-13,8;UBERON:0000454,6.14e-13,8;UBERON:0000369,3.07e-11,5;UBERON:0002435,3.07e-11,5;UBERON:0000204,3.07e-11,5;UBERON:0010082,3.07e-11,5;UBERON:0010314,8.91e-11,92;UBERON:0000025,1.37e-07,114;UBERON:0004111,1.64e-07,122;UBERON:0004684,1.80e-07,3;UBERON:0002275,1.80e-07,3
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,4.00282302668886,0,0.234064526321993,0,0.638177271962691,0.171200729931206,0.524522414513984,0,0,0,0,0,0,0.680346321208558,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0.577703239502549,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0.219686182734472,0.58328969722285,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,2.11596391708813,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.540023753326763,0.841299845405528,0.856952953211411,1.76694832761291,0.857435594504678,0.670918297127655,2.75765635983006,5.50579404996943,2.42605942361857,2.15049146558741,1.31886287730194,2.01272815925301,2.6045668527838,0.837548997004143,1.68828783009504,2.44477196442896,1.47314292736834,0.996601765593721,0.745597783301202,0.454357159999104,0,0,0,0,0,0,0,0.280888840263504,1.02258193546835,0.779358013808606,2.12003744706204,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0,0,0,0,0.117588707135705,0.125666591329675,1.48316980640624,0,0,0.970601099684455,0,0,5.59175283654366,0.292780797011547,0,0,0,0,0,1.49790639404823,6.8625090422794,3.14135880282161,7.99591872884472,8.43861009190091,2.90903262383384,5.51620294430376,0,0,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.272145996605311,0.2562274405697,0.187403449119458,0.258703370739016,0,0.378212160335639,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,3.15434922846191,0.308713837137853,0,0.528901133327089,0,0,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0.329397909448022,0,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0.442655759869801,0.295220295959204,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0.289298117163023,0,0,0,0,0.321101179975584,0.586058432961016,0,0,0,0,0,0,0,0,0.404810701674894,0,0,18.315315036043,0.283880170416537,0.35613120733451,0.162886959353576,0.494910368917606,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.720244376125241,0.129358683782755,0.428674070063185,0,0,0.329098041204242,0,0,0,0,0,0.161464426695906,0,0,0,0.874442509889552,0.370850604021019,0.170870880797853,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0.108005340821801,0,0,0.269728692769641,0.743881101528023,1.04702376793612,0.90730481304255,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0.0897138566094757,0,2.51146472241848,0.563047426353546,0.36630324853453,0.214368379079066,0,11.2950368523413,15.651058041244,9.73922372846974,17.7008777813998,9.59115527678899,12.0863023582352,8.77529250301348,13.5096360967266,12.2348450425735,15.0150490408028,0.103787347584177,0,0.170733605754134,0,0,0,0.44449345560323,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.448176066834085,0.229741875822453,0,0.463537303779422,0,0.412085900803307,0,0.342869252385415,0.177475806159338,0,0.290692833264657,0.376437521661322,0.25384382367503,0.182927972872773,0.263069711437843,0.271608227691724,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.464810523557898,0.385813221962283,0.249810577937946,0.233931608445408,1.28922632428979,0.57386499620653,0,0.231867835620421
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,4.00282302668886,0,0.234064526321993,0,0.638177271962691,0.171200729931206,0.524522414513984,0,0,0,0,0,0,0.680346321208558,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0.577703239502549,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0.219686182734472,0.58328969722285,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,2.11596391708813,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.540023753326763,0.841299845405528,0.856952953211411,1.76694832761291,0.857435594504678,0.670918297127655,2.75765635983006,5.50579404996943,2.42605942361857,2.15049146558741,1.31886287730194,2.01272815925301,2.6045668527838,0.837548997004143,1.68828783009504,2.44477196442896,1.47314292736834,0.996601765593721,0.745597783301202,0.454357159999104,0,0,0,0,0,0,0,0.280888840263504,1.02258193546835,0.779358013808606,2.12003744706204,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0,0,0,0,0.117588707135705,0.125666591329675,1.48316980640624,0,0,0.970601099684455,0,0,5.59175283654366,0.292780797011547,0,0,0,0,0,1.49790639404823,6.8625090422794,3.14135880282161,7.99591872884472,8.43861009190091,2.90903262383384,5.51620294430376,0,0,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.272145996605311,0.2562274405697,0.187403449119458,0.258703370739016,0,0.378212160335639,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,3.15434922846191,0.308713837137853,0,0.528901133327089,0,0,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0.329397909448022,0,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0.442655759869801,0.295220295959204,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0.289298117163023,0,0,0,0,0.321101179975584,0.586058432961016,0,0,0,0,0,0,0,0,0.404810701674894,0,0,18.315315036043,0.283880170416537,0.35613120733451,0.162886959353576,0.494910368917606,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.720244376125241,0.129358683782755,0.428674070063185,0,0,0.329098041204242,0,0,0,0,0,0.161464426695906,0,0,0,0.874442509889552,0.370850604021019,0.170870880797853,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0.108005340821801,0,0,0.269728692769641,0.743881101528023,1.04702376793612,0.90730481304255,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0.0897138566094757,0,2.51146472241848,0.563047426353546,0.36630324853453,0.214368379079066,0,11.2950368523413,15.651058041244,9.73922372846974,17.7008777813998,9.59115527678899,12.0863023582352,8.77529250301348,13.5096360967266,12.2348450425735,15.0150490408028,0.103787347584177,0,0.170733605754134,0,0,0,0.44449345560323,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.448176066834085,0.229741875822453,0,0.463537303779422,0,0.412085900803307,0,0.342869252385415,0.177475806159338,0,0.290692833264657,0.376437521661322,0.25384382367503,0.182927972872773,0.263069711437843,0.271608227691724,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.464810523557898,0.385813221962283,0.249810577937946,0.233931608445408,1.28922632428979,0.57386499620653,0,0.231867835620421
|short_description=p2@Kcnf1
|short_description=p2@Kcnf1
}}
}}

Latest revision as of 11:40, 26 September 2015

Short description:p2@Kcnf1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Kcnf1_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 300bp_to_ENSMUST00000170580, NM_201531, uc007ncn.2_5end
EntrezGene:Kcnf1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Kcnf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.64
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F13.14
cortex, adult.CNhs10473.12-14D58.00
cortex, neonate N30.CNhs11107.1392-42F28.44
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B25.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I918.32
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.51
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A215.65
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D717.70
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.51
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.23
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A915.02
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.45e-1123
neuroblast (sensu Vertebrata)2.45e-1123
raphe nuclei neuron1.80e-073
neuron3.54e-0733
neuronal stem cell3.54e-0733
neuroblast3.54e-0733
electrically signaling cell3.54e-0733
striatum neuron4.77e-073

Uber anatomy
Ontology termp-valuen
gray matter6.14e-3034
brain grey matter8.06e-3029
regional part of telencephalon8.06e-3029
telencephalon8.06e-3029
regional part of nervous system4.51e-2954
anterior neural tube2.16e-2740
regional part of forebrain8.66e-2639
forebrain8.66e-2639
future forebrain8.66e-2639
occipital lobe3.43e-2510
visual cortex3.43e-2510
neocortex3.43e-2510
brain5.94e-2547
future brain5.94e-2547
neural tube1.28e-2352
neural rod1.28e-2352
future spinal cord1.28e-2352
neural keel1.28e-2352
central nervous system1.72e-2373
regional part of brain4.37e-2346
nervous system1.11e-2275
pre-chordal neural plate2.49e-2149
regional part of cerebral cortex7.82e-2017
cerebral cortex2.56e-1821
cerebral hemisphere2.56e-1821
pallium2.56e-1821
neurectoderm4.52e-1864
neural plate4.52e-1864
presumptive neural plate4.52e-1864
ectoderm-derived structure8.42e-1895
ectoderm8.42e-1895
presumptive ectoderm8.42e-1895
ecto-epithelium4.12e-1573
basal ganglion6.14e-138
nuclear complex of neuraxis6.14e-138
aggregate regional part of brain6.14e-138
collection of basal ganglia6.14e-138
cerebral subcortex6.14e-138
corpus striatum3.07e-115
striatum3.07e-115
ventral part of telencephalon3.07e-115
future corpus striatum3.07e-115
structure with developmental contribution from neural crest8.91e-1192
tube1.37e-07114
anatomical conduit1.64e-07122
raphe nuclei1.80e-073
reticular formation1.80e-073
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