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FFCP PHASE1:Mm9::chr17:24625682..24625716,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=268932
|EntrezGene=268932
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q6P9K8
|UniProt=Q6P9K8
|association_with_transcript=-11bp_to_ENSMUST00000024958,ENSMUST00000088474,ENSMUST00000115347,NM_027937,uc008awm.1,uc008awo.1,uc008awp.2,uc012amk.1_5end
|association_with_transcript=-11bp_to_ENSMUST00000024958,ENSMUST00000088474,ENSMUST00000115347,NM_027937,uc008awm.1,uc008awo.1,uc008awp.2,uc012amk.1_5end
|cluster_id=chr17:24625682..24625716,+
|description=CAGE_peak_4_at_Caskin1_5end
|description=CAGE_peak_4_at_Caskin1_5end
|id=chr17:24625682..24625716,+
|id=chr17:24625682..24625716,+
|ontology_enrichment_celltype=CL:0000117!1.13e-13!23;CL:0000337!1.13e-13!23;CL:0000221!1.56e-11!44;CL:0000133!1.56e-11!44;CL:0000540!2.95e-11!33;CL:0000047!2.95e-11!33;CL:0000031!2.95e-11!33;CL:0000404!2.95e-11!33;CL:0002319!4.64e-11!43;CL:0000393!5.68e-08!39;CL:0000211!5.68e-08!39;CL:0000055!8.06e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,3.57e-23,23;CL:0000337,3.57e-23,23;CL:0000540,3.23e-17,33;CL:0000047,3.23e-17,33;CL:0000031,3.23e-17,33;CL:0000404,3.23e-17,33;CL:0000221,1.01e-13,44;CL:0000133,1.01e-13,44;CL:0000393,1.60e-13,39;CL:0000211,1.60e-13,39;CL:0002319,6.21e-13,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!8.33e-31!102;UBERON:0000924!8.33e-31!102;UBERON:0006601!8.33e-31!102;UBERON:0001017!2.69e-30!73;UBERON:0005743!2.69e-30!73;UBERON:0000073!8.64e-30!75;UBERON:0001016!8.64e-30!75;UBERON:0002346!1.17e-29!71;UBERON:0003075!1.17e-29!71;UBERON:0007284!1.17e-29!71;UBERON:0000033!3.38e-28!63;UBERON:0001049!5.94e-28!52;UBERON:0005068!5.94e-28!52;UBERON:0006241!5.94e-28!52;UBERON:0007135!5.94e-28!52;UBERON:0000955!8.25e-27!50;UBERON:0006238!8.25e-27!50;UBERON:0002616!5.76e-26!49;UBERON:0002020!2.95e-22!34;UBERON:0003080!3.93e-22!40;UBERON:0003056!4.71e-22!49;UBERON:0002780!2.23e-21!39;UBERON:0001890!2.23e-21!39;UBERON:0006240!2.23e-21!39;UBERON:0002791!4.16e-19!29;UBERON:0003528!4.16e-19!29;UBERON:0001893!4.16e-19!29;UBERON:0000153!3.03e-14!94;UBERON:0000956!4.17e-14!21;UBERON:0001869!4.17e-14!21;UBERON:0000203!4.17e-14!21;UBERON:0007811!9.09e-14!86;UBERON:0002619!6.22e-12!17;UBERON:0002021!7.13e-09!10;UBERON:0000411!7.13e-09!10;UBERON:0001950!7.13e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.36e-44,54;UBERON:0001017,2.43e-43,73;UBERON:0001016,8.55e-42,75;UBERON:0001049,3.09e-41,52;UBERON:0005068,3.09e-41,52;UBERON:0006241,3.09e-41,52;UBERON:0007135,3.09e-41,52;UBERON:0002020,7.86e-36,34;UBERON:0000955,2.98e-35,47;UBERON:0006238,2.98e-35,47;UBERON:0004121,3.10e-34,95;UBERON:0000924,3.10e-34,95;UBERON:0006601,3.10e-34,95;UBERON:0002616,9.42e-34,46;UBERON:0002346,9.07e-33,64;UBERON:0003075,9.07e-33,64;UBERON:0007284,9.07e-33,64;UBERON:0003080,6.78e-31,40;UBERON:0010371,3.04e-30,73;UBERON:0003528,9.22e-30,29;UBERON:0002791,9.22e-30,29;UBERON:0001893,9.22e-30,29;UBERON:0002780,1.60e-29,39;UBERON:0001890,1.60e-29,39;UBERON:0006240,1.60e-29,39;UBERON:0003056,5.84e-25,49;UBERON:0010314,1.41e-23,92;UBERON:0000956,3.48e-20,21;UBERON:0001869,3.48e-20,21;UBERON:0000203,3.48e-20,21;UBERON:0002619,5.42e-16,17;UBERON:0002021,8.48e-16,10;UBERON:0000411,8.48e-16,10;UBERON:0001950,8.48e-16,10;UBERON:0004111,3.94e-12,122;UBERON:0000025,4.11e-12,114;UBERON:0002420,1.30e-10,8;UBERON:0007245,1.30e-10,8;UBERON:0010009,1.30e-10,8;UBERON:0010011,1.30e-10,8;UBERON:0000454,1.30e-10,8;UBERON:0003076,3.39e-10,12;UBERON:0003057,3.39e-10,12;UBERON:0002240,3.05e-08,6;UBERON:0005174,3.05e-08,6;UBERON:0001137,3.05e-08,6;UBERON:0011216,4.80e-08,194;UBERON:0001948,4.57e-07,5;UBERON:0002315,4.57e-07,5;UBERON:0000369,5.17e-07,5;UBERON:0002435,5.17e-07,5;UBERON:0000204,5.17e-07,5;UBERON:0010082,5.17e-07,5
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.65407546914134,0.878744730937887,0.777719596297134,0.279972843250725,0,0,0,0,0,0,0,1.82084814773638,1.5869729378161,1.26766280701236,0,0,0,0,0,0.599200221036809,3.07374644257244,1.76272340924412,1.21505344498522,1.89292465216244,5.71301968807607,4.19650227808066,2.08234358665422,1.72521847832825,0.919218786610021,3.30347642998166,5.49055553766307,4.6081959976873,2.37395317914349,2.19570344645783,1.04182674111352,5.58365998002762,4.50210088025344,5.04234217663473,3.83017161115768,4.9830088279686,1.4911955666024,0.151452386666368,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,1.69012103732017,0,0,0,0,0,0,0.11418387971906,0,1.33597925158342,0.173485326766136,0.913396434936424,0.922461989024234,0.753613202763113,0.705532242814229,1.0053327306374,1.23597483867187,0.289198713839823,0,0.485300549842228,0,0,0,5.27005434620785,3.35114730901528,0,0,0,0,7.78911324905078,8.23501085073528,8.79580464790051,8.34356736922927,6.13717097592793,6.85700547046548,8.92326946872667,0.509196819251581,0.248813941220186,0.252722758433675,0,0.130120442962704,0.459804208866946,0.360124259610698,0.452114453507145,0.544291993210623,0.640568601424249,0.843315521037559,1.29351685369508,0.215567992932842,0.378212160335639,0.527853372491847,0.657587197282725,0.556094498451196,0.348252166522167,0.205782136407943,0.995171334092466,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0,10.9350773253346,4.32199371992995,0,0.264450566663544,0,0.232236671860439,0,0,0.444756087689741,0,0,0,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0.350679099451593,0.379419222745544,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0.478364305972461,0,0,0,0,0,0,0,3.05046120976805,4.33683240391152,0,0,0,0.390438744296638,0.430846795465598,0,0.891194696329576,0,0,0.292255857911312,1.18586333383957,9.63963949265421,0.709700426041343,0.35613120733451,0.81443479676788,0,0,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,1.02131881726136,0.18006109403131,0.129358683782755,0.214337035031592,0.886701168211368,1.60531935841864,0.658196082408484,1.2178597964584,1.40803024838226,1.27099242518292,0,0,0,0.180938774784468,0,0.164140899745061,0,4.63563255026274,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.609958401380546,0.216010681643603,0.209088296014469,0,0.134864346384821,0.661227645802687,0,0,0.621339313086926,0,0.747582730219894,0.496375471371293,0.583353565032143,0.904118764344118,0.675824501963113,1.05621514781179,1.0416350787516,1.99232754408851,1.20792060413003,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0.448569283047378,0.335769232728157,0,0,0,0.214368379079066,0,8.471277639256,11.0478056761722,9.73922372846974,10.1393377582776,7.53590771747707,6.7985450765073,11.4753825039407,9.00642406448441,8.15656336171568,8.28416498802912,0,0.399024873401031,0.341467211508268,0.729320151204882,0.419226325255965,0.367687016900028,0.666740183404846,0.618105171716683,0.64183841918363,0.252697211763798,1.01391719956096,0.565879024158229,0.749132059759059,0.384150914429216,0.861532034334199,0,0.811190281613988,0,0.824171801606613,0.441596760403192,0.342869252385415,0.354951612318675,0.476872379894642,0.581385666529314,0.564656282491984,0.846146078916765,0.73171189149109,0.789209134313529,1.08643291076689,0,0.474540072496697,0.689531376628944,1.22769312950907,0.77468420592983,0.964533054905707,1.49886346762768,0.233931608445408,0.214871054048298,0.382576664137687,0.441182838239031,0
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.65407546914134,0.878744730937887,0.777719596297134,0.279972843250725,0,0,0,0,0,0,0,1.82084814773638,1.5869729378161,1.26766280701236,0,0,0,0,0,0.599200221036809,3.07374644257244,1.76272340924412,1.21505344498522,1.89292465216244,5.71301968807607,4.19650227808066,2.08234358665422,1.72521847832825,0.919218786610021,3.30347642998166,5.49055553766307,4.6081959976873,2.37395317914349,2.19570344645783,1.04182674111352,5.58365998002762,4.50210088025344,5.04234217663473,3.83017161115768,4.9830088279686,1.4911955666024,0.151452386666368,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,1.69012103732017,0,0,0,0,0,0,0.11418387971906,0,1.33597925158342,0.173485326766136,0.913396434936424,0.922461989024234,0.753613202763113,0.705532242814229,1.0053327306374,1.23597483867187,0.289198713839823,0,0.485300549842228,0,0,0,5.27005434620785,3.35114730901528,0,0,0,0,7.78911324905078,8.23501085073528,8.79580464790051,8.34356736922927,6.13717097592793,6.85700547046548,8.92326946872667,0.509196819251581,0.248813941220186,0.252722758433675,0,0.130120442962704,0.459804208866946,0.360124259610698,0.452114453507145,0.544291993210623,0.640568601424249,0.843315521037559,1.29351685369508,0.215567992932842,0.378212160335639,0.527853372491847,0.657587197282725,0.556094498451196,0.348252166522167,0.205782136407943,0.995171334092466,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0,10.9350773253346,4.32199371992995,0,0.264450566663544,0,0.232236671860439,0,0,0.444756087689741,0,0,0,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0.350679099451593,0.379419222745544,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0.478364305972461,0,0,0,0,0,0,0,3.05046120976805,4.33683240391152,0,0,0,0.390438744296638,0.430846795465598,0,0.891194696329576,0,0,0.292255857911312,1.18586333383957,9.63963949265421,0.709700426041343,0.35613120733451,0.81443479676788,0,0,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,1.02131881726136,0.18006109403131,0.129358683782755,0.214337035031592,0.886701168211368,1.60531935841864,0.658196082408484,1.2178597964584,1.40803024838226,1.27099242518292,0,0,0,0.180938774784468,0,0.164140899745061,0,4.63563255026274,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.609958401380546,0.216010681643603,0.209088296014469,0,0.134864346384821,0.661227645802687,0,0,0.621339313086926,0,0.747582730219894,0.496375471371293,0.583353565032143,0.904118764344118,0.675824501963113,1.05621514781179,1.0416350787516,1.99232754408851,1.20792060413003,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0.448569283047378,0.335769232728157,0,0,0,0.214368379079066,0,8.471277639256,11.0478056761722,9.73922372846974,10.1393377582776,7.53590771747707,6.7985450765073,11.4753825039407,9.00642406448441,8.15656336171568,8.28416498802912,0,0.399024873401031,0.341467211508268,0.729320151204882,0.419226325255965,0.367687016900028,0.666740183404846,0.618105171716683,0.64183841918363,0.252697211763798,1.01391719956096,0.565879024158229,0.749132059759059,0.384150914429216,0.861532034334199,0,0.811190281613988,0,0.824171801606613,0.441596760403192,0.342869252385415,0.354951612318675,0.476872379894642,0.581385666529314,0.564656282491984,0.846146078916765,0.73171189149109,0.789209134313529,1.08643291076689,0,0.474540072496697,0.689531376628944,1.22769312950907,0.77468420592983,0.964533054905707,1.49886346762768,0.233931608445408,0.214871054048298,0.382576664137687,0.441182838239031,0
|short_description=p4@Caskin1
|short_description=p4@Caskin1
}}
}}

Latest revision as of 01:34, 26 September 2015

Short description:p4@Caskin1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Caskin1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -11bp_to_ENSMUST00000024958, ENSMUST00000088474, ENSMUST00000115347, NM_027937, uc008awm.1, uc008awo.1, uc008awp.2, uc012amk.1_5end
EntrezGene:Caskin1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Caskin1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.08
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.27
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.79
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F18.80
cortex, adult.CNhs10473.12-14D58.34
cortex, neonate N30.CNhs11107.1392-42F26.14
diencephalon, adult.CNhs10482.20-12F26.86
diencephalon, neonate N30.CNhs11201.1388-42B28.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E810.94
hippocampus, neonate N00.CNhs11228.627-43G14.32
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A34.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I99.64
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.64
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D91.99
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.14
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.16
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.57e-2323
neuroblast (sensu Vertebrata)3.57e-2323
neuron3.23e-1733
neuronal stem cell3.23e-1733
neuroblast3.23e-1733
electrically signaling cell3.23e-1733
ectodermal cell1.01e-1344
neurectodermal cell1.01e-1344
electrically responsive cell1.60e-1339
electrically active cell1.60e-1339
neural cell6.21e-1343

Uber anatomy
Ontology termp-valuen
regional part of nervous system7.36e-4454
central nervous system2.43e-4373
nervous system8.55e-4275
neural tube3.09e-4152
neural rod3.09e-4152
future spinal cord3.09e-4152
neural keel3.09e-4152
gray matter7.86e-3634
brain2.98e-3547
future brain2.98e-3547
ectoderm-derived structure3.10e-3495
ectoderm3.10e-3495
presumptive ectoderm3.10e-3495
regional part of brain9.42e-3446
neurectoderm9.07e-3364
neural plate9.07e-3364
presumptive neural plate9.07e-3364
anterior neural tube6.78e-3140
ecto-epithelium3.04e-3073
brain grey matter9.22e-3029
regional part of telencephalon9.22e-3029
telencephalon9.22e-3029
regional part of forebrain1.60e-2939
forebrain1.60e-2939
future forebrain1.60e-2939
pre-chordal neural plate5.84e-2549
structure with developmental contribution from neural crest1.41e-2392
cerebral cortex3.48e-2021
cerebral hemisphere3.48e-2021
pallium3.48e-2021
regional part of cerebral cortex5.42e-1617
occipital lobe8.48e-1610
visual cortex8.48e-1610
neocortex8.48e-1610
anatomical conduit3.94e-12122
tube4.11e-12114
basal ganglion1.30e-108
nuclear complex of neuraxis1.30e-108
aggregate regional part of brain1.30e-108
collection of basal ganglia1.30e-108
cerebral subcortex1.30e-108
posterior neural tube3.39e-1012
chordal neural plate3.39e-1012
spinal cord3.05e-086
dorsal region element3.05e-086
dorsum3.05e-086
organ system subdivision4.80e-08194
regional part of spinal cord4.57e-075
gray matter of spinal cord4.57e-075
corpus striatum5.17e-075
striatum5.17e-075
ventral part of telencephalon5.17e-075
future corpus striatum5.17e-075
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