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FFCP PHASE1:Mm9::chr13:20564933..20564958,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=140580
|EntrezGene=140580
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8BPU7
|UniProt=Q8BPU7
|association_with_transcript=-3bp_to_ENSMUST00000110493,uc007ppq.1,uc007ppr.1_5end
|association_with_transcript=-3bp_to_ENSMUST00000110493,uc007ppq.1,uc007ppr.1_5end
|cluster_id=chr13:20564933..20564958,+
|description=CAGE_peak_2_at_Elmo1_5end
|description=CAGE_peak_2_at_Elmo1_5end
|id=chr13:20564933..20564958,+
|id=chr13:20564933..20564958,+
|ontology_enrichment_celltype=CL:0000117!5.36e-14!23;CL:0000337!5.36e-14!23;CL:0000540!2.93e-12!33;CL:0000047!2.93e-12!33;CL:0000031!2.93e-12!33;CL:0000404!2.93e-12!33;CL:0000221!7.87e-11!44;CL:0000133!7.87e-11!44;CL:0002319!9.00e-11!43;CL:0000393!4.97e-08!39;CL:0000211!4.97e-08!39;CL:0000055!5.64e-07!50
|ontology_enrichment_celltype=CL:0000117!5.36e-14!23;CL:0000337!5.36e-14!23;CL:0000540!2.93e-12!33;CL:0000047!2.93e-12!33;CL:0000031!2.93e-12!33;CL:0000404!2.93e-12!33;CL:0000221!7.87e-11!44;CL:0000133!7.87e-11!44;CL:0002319!9.00e-11!43;CL:0000393!4.97e-08!39;CL:0000211!4.97e-08!39;CL:0000055!5.64e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,3.13e-18,23;CL:0000337,3.13e-18,23;CL:0000540,2.47e-13,33;CL:0000047,2.47e-13,33;CL:0000031,2.47e-13,33;CL:0000404,2.47e-13,33;CL:0002319,6.35e-11,43;CL:0000221,1.94e-10,44;CL:0000133,1.94e-10,44;CL:0000393,8.43e-10,39;CL:0000211,8.43e-10,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.97e-27!75;UBERON:0001016!3.97e-27!75;UBERON:0001017!4.46e-27!73;UBERON:0005743!4.46e-27!73;UBERON:0002346!1.14e-25!71;UBERON:0003075!1.14e-25!71;UBERON:0007284!1.14e-25!71;UBERON:0004121!1.69e-24!102;UBERON:0000924!1.69e-24!102;UBERON:0006601!1.69e-24!102;UBERON:0000033!9.62e-24!63;UBERON:0001049!2.51e-23!52;UBERON:0005068!2.51e-23!52;UBERON:0006241!2.51e-23!52;UBERON:0007135!2.51e-23!52;UBERON:0000955!9.45e-23!50;UBERON:0006238!9.45e-23!50;UBERON:0002616!5.84e-22!49;UBERON:0003056!1.16e-20!49;UBERON:0002020!1.22e-18!34;UBERON:0003080!6.82e-18!40;UBERON:0002780!3.53e-17!39;UBERON:0001890!3.53e-17!39;UBERON:0006240!3.53e-17!39;UBERON:0002791!9.29e-16!29;UBERON:0003528!9.29e-16!29;UBERON:0001893!9.29e-16!29;UBERON:0007811!2.63e-11!86;UBERON:0000956!6.31e-11!21;UBERON:0001869!6.31e-11!21;UBERON:0000203!6.31e-11!21;UBERON:0000153!6.30e-10!94;UBERON:0002619!7.30e-09!17;UBERON:0002021!1.19e-07!10;UBERON:0000411!1.19e-07!10;UBERON:0001950!1.19e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.10e-33,64;UBERON:0003075,5.10e-33,64;UBERON:0007284,5.10e-33,64;UBERON:0000073,1.68e-30,54;UBERON:0001017,3.14e-30,73;UBERON:0001016,9.19e-30,75;UBERON:0001049,2.99e-28,52;UBERON:0005068,2.99e-28,52;UBERON:0006241,2.99e-28,52;UBERON:0007135,2.99e-28,52;UBERON:0004121,4.08e-28,95;UBERON:0000924,4.08e-28,95;UBERON:0006601,4.08e-28,95;UBERON:0010371,4.31e-27,73;UBERON:0000955,1.60e-24,47;UBERON:0006238,1.60e-24,47;UBERON:0003056,2.11e-24,49;UBERON:0002020,8.29e-24,34;UBERON:0002616,1.62e-23,46;UBERON:0003080,1.14e-20,40;UBERON:0003528,5.94e-20,29;UBERON:0002791,5.94e-20,29;UBERON:0001893,5.94e-20,29;UBERON:0002780,9.58e-20,39;UBERON:0001890,9.58e-20,39;UBERON:0006240,9.58e-20,39;UBERON:0010314,7.49e-18,92;UBERON:0000956,1.65e-13,21;UBERON:0001869,1.65e-13,21;UBERON:0000203,1.65e-13,21;UBERON:0002619,9.27e-11,17;UBERON:0002021,9.95e-10,10;UBERON:0000411,9.95e-10,10;UBERON:0001950,9.95e-10,10;UBERON:0003076,5.13e-08,12;UBERON:0003057,5.13e-08,12;UBERON:0002420,1.05e-07,8;UBERON:0007245,1.05e-07,8;UBERON:0010009,1.05e-07,8;UBERON:0010011,1.05e-07,8;UBERON:0000454,1.05e-07,8
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.979242459702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.878744730937887,0,0.55994568650145,0,0,0,0,0,0,0,63.9320016316329,65.5948814297321,45.6358610524449,0,0,0,0,0,13.1824048628098,4.61061966385865,36.1876746956587,37.53165085621,32.3900440481128,49.1319693174542,52.3458442055324,60.7554364106172,59.4241920313065,45.041720543891,105.711245759413,156.416989154355,131.794405533857,49.8530167620133,50.4096916249277,45.8403766089949,104.414441626516,60.7783618834214,64.6336588095907,54.8009168981022,64.9214864443909,72.5093844260419,0.37863096666592,1.36028808192214,0,0,0,0,0,0,4.63466586434781,0,0,0,0.704217098883403,0,0,0,0,0,0,2.62622923353838,0,0,0.520455980298408,0.304465478312141,0.461230994512117,1.50722640552623,1.64624189989987,0.251333182659351,0,0.578397427679647,0,0.647067399789637,0,0,1.86391761218122,117.112318804619,116.033475574654,0.255457055208591,0,0,0,117.136280014571,197.182759814828,129.298328324137,135.582969749976,126.067720463853,200.515462999975,154.615923703573,0.611036183101898,0.124406970610093,0.252722758433675,15.7831391914855,1.43132487258974,1.60931473103431,4.50155324513373,10.3986324306643,10.2735113718505,12.9394857487698,8.52685693493532,40.6164292060255,0,0.189106080167819,0.175951124163949,0.876782929710299,0,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0.536546802799238,0.233530684734339,0.329119699826961,0.492502392237286,0.0810688095458557,0,0,0,39.74480027862,41.6763680136102,0,0,0.426576501070468,0,0.128867461322093,0.201683524623343,0.889512175379481,0,0.474529061544512,0.329397909448022,0.754005626400808,0.795825888164603,0.58489226135736,0,0.216138049874694,0.199141273254367,0.379335801906163,0.685491075658373,2.25415471346161,0.610953983535943,0.387904974335251,0.350679099451593,0.252946148497029,0.147610147979602,0.156998727841375,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0.169745085775188,0,0.335012514883631,0.238043640886014,0,0,0,0.478364305972461,0.491589944147214,0.518054945597687,0.433947175744535,0,0,0,0,102.591827002199,93.0660791542093,0,0,1.89304931649754,1.17131623288992,1.93881057959519,0,0.222798674082394,0.283076530788832,0.809621403349789,1.75353514746787,0.395287777946524,164.195192691543,0.425820255624806,1.24645922567079,0,3.13443233647817,0,0.485561272309963,0.302323556964751,0.377210159511796,0,0.922305443831782,0.258428293168221,0.363533729477506,0.712994756769443,0.316036757935816,0,0,1.36175842301515,0.540183282093931,0.905510786479282,0.214337035031592,1.24138163549592,2.14042581122485,1.64549020602121,1.2178597964584,0.469343416127421,0,1.32317038832977,0.16488625294148,1.13025098687134,0.422190474497091,0,0,0.291480836629851,50.2502568448481,0,0.619160603889667,0,0,0.136694227721025,0,0,0,0.138199973804424,2.86401185404534,0.316335993581135,0.813277868507395,0.324016022465404,0.627264888043406,0.655087691238533,0.674321731924103,0.991841468704031,1.04702376793612,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0.821687657318618,0,0.179026695667481,0.198681354781265,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,1.35232715822533,0.187682475451182,0.36630324853453,0.214368379079066,0,91.4897985039648,87.9221201728708,83.0698494487125,73.3813088607546,89.0607275701835,93.6688432763229,101.253375034771,107.176446367364,115.098171881988,101.998781415109,9.96358536808096,20.3502685434526,18.2684958156924,11.1829089851415,13.6248555708189,13.604419625301,12.0013233012872,12.9802086060503,14.1204452220399,13.1402550117175,15.7157165931949,11.6948331659367,13.2034525532534,13.2532065478079,12.17631941859,10.9547548995107,8.11190281613988,10.4170979050401,7.00546031365621,9.42073088860143,12.343293085875,11.0034999818789,12.8755542571553,12.7904846636449,13.3635320189769,11.3383574574847,10.9756783723664,16.0472523977084,7.74083448921412,10.1005608898393,11.5075967580449,8.86540341380071,9.41231399290286,11.4653262477615,6.55882477335881,28.4784058849258,9.59119594626174,8.37997110788363,5.35607329792761,2.20591419119516,2.78241402744506
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.979242459702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.878744730937887,0,0.55994568650145,0,0,0,0,0,0,0,63.9320016316329,65.5948814297321,45.6358610524449,0,0,0,0,0,13.1824048628098,4.61061966385865,36.1876746956587,37.53165085621,32.3900440481128,49.1319693174542,52.3458442055324,60.7554364106172,59.4241920313065,45.041720543891,105.711245759413,156.416989154355,131.794405533857,49.8530167620133,50.4096916249277,45.8403766089949,104.414441626516,60.7783618834214,64.6336588095907,54.8009168981022,64.9214864443909,72.5093844260419,0.37863096666592,1.36028808192214,0,0,0,0,0,0,4.63466586434781,0,0,0,0.704217098883403,0,0,0,0,0,0,2.62622923353838,0,0,0.520455980298408,0.304465478312141,0.461230994512117,1.50722640552623,1.64624189989987,0.251333182659351,0,0.578397427679647,0,0.647067399789637,0,0,1.86391761218122,117.112318804619,116.033475574654,0.255457055208591,0,0,0,117.136280014571,197.182759814828,129.298328324137,135.582969749976,126.067720463853,200.515462999975,154.615923703573,0.611036183101898,0.124406970610093,0.252722758433675,15.7831391914855,1.43132487258974,1.60931473103431,4.50155324513373,10.3986324306643,10.2735113718505,12.9394857487698,8.52685693493532,40.6164292060255,0,0.189106080167819,0.175951124163949,0.876782929710299,0,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0.536546802799238,0.233530684734339,0.329119699826961,0.492502392237286,0.0810688095458557,0,0,0,39.74480027862,41.6763680136102,0,0,0.426576501070468,0,0.128867461322093,0.201683524623343,0.889512175379481,0,0.474529061544512,0.329397909448022,0.754005626400808,0.795825888164603,0.58489226135736,0,0.216138049874694,0.199141273254367,0.379335801906163,0.685491075658373,2.25415471346161,0.610953983535943,0.387904974335251,0.350679099451593,0.252946148497029,0.147610147979602,0.156998727841375,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0.169745085775188,0,0.335012514883631,0.238043640886014,0,0,0,0.478364305972461,0.491589944147214,0.518054945597687,0.433947175744535,0,0,0,0,102.591827002199,93.0660791542093,0,0,1.89304931649754,1.17131623288992,1.93881057959519,0,0.222798674082394,0.283076530788832,0.809621403349789,1.75353514746787,0.395287777946524,164.195192691543,0.425820255624806,1.24645922567079,0,3.13443233647817,0,0.485561272309963,0.302323556964751,0.377210159511796,0,0.922305443831782,0.258428293168221,0.363533729477506,0.712994756769443,0.316036757935816,0,0,1.36175842301515,0.540183282093931,0.905510786479282,0.214337035031592,1.24138163549592,2.14042581122485,1.64549020602121,1.2178597964584,0.469343416127421,0,1.32317038832977,0.16488625294148,1.13025098687134,0.422190474497091,0,0,0.291480836629851,50.2502568448481,0,0.619160603889667,0,0,0.136694227721025,0,0,0,0.138199973804424,2.86401185404534,0.316335993581135,0.813277868507395,0.324016022465404,0.627264888043406,0.655087691238533,0.674321731924103,0.991841468704031,1.04702376793612,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0.821687657318618,0,0.179026695667481,0.198681354781265,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,1.35232715822533,0.187682475451182,0.36630324853453,0.214368379079066,0,91.4897985039648,87.9221201728708,83.0698494487125,73.3813088607546,89.0607275701835,93.6688432763229,101.253375034771,107.176446367364,115.098171881988,101.998781415109,9.96358536808096,20.3502685434526,18.2684958156924,11.1829089851415,13.6248555708189,13.604419625301,12.0013233012872,12.9802086060503,14.1204452220399,13.1402550117175,15.7157165931949,11.6948331659367,13.2034525532534,13.2532065478079,12.17631941859,10.9547548995107,8.11190281613988,10.4170979050401,7.00546031365621,9.42073088860143,12.343293085875,11.0034999818789,12.8755542571553,12.7904846636449,13.3635320189769,11.3383574574847,10.9756783723664,16.0472523977084,7.74083448921412,10.1005608898393,11.5075967580449,8.86540341380071,9.41231399290286,11.4653262477615,6.55882477335881,28.4784058849258,9.59119594626174,8.37997110788363,5.35607329792761,2.20591419119516,2.78241402744506
|short_description=p2@Elmo1
|short_description=p2@Elmo1
}}
}}

Latest revision as of 05:57, 27 September 2015

Short description:p2@Elmo1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Elmo1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -3bp_to_ENSMUST00000110493, uc007ppq.1, uc007ppr.1_5end
EntrezGene:Elmo1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Elmo1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A327.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C363.93
Mouse Granule cells, donor2.CNhs12357.11731-123E365.59
Mouse Granule cells, donor3.CNhs12108.11636-122C745.64
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C813.18
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D536.19
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F537.53
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D932.39
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F149.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D552.35
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D260.76
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F259.42
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D645.04
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3105.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3156.42
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7131.79
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D449.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F450.41
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D845.84
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4104.41
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E560.78
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I664.63
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D654.80
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F664.92
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E172.51
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F91.36
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.63
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B2117.11
cerebellum, neonate N30.CNhs11135.1395-42I2116.03
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4117.14
corpus striatum, adult.CNhs10487.19-21D8197.18
corpus striatum, neonate N00.CNhs11226.630-43F1129.30
cortex, adult.CNhs10473.12-14D5135.58
cortex, neonate N30.CNhs11107.1392-42F2126.07
diencephalon, adult.CNhs10482.20-12F2200.52
diencephalon, neonate N30.CNhs11201.1388-42B2154.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G415.78
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C94.50
eyeball, embryo E17.CNhs11023.1261-18D410.40
eyeball, neonate N00.CNhs11207.633-15C610.27
eyeball, neonate N01.CNhs11140.1532-43E712.94
eyeball, neonate N02.CNhs11205.1551-44G88.53
eyeball, neonate N16.CNhs11188.777-19A240.62
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E839.74
hippocampus, neonate N00.CNhs11228.627-43G141.68
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C2102.59
medulla oblongata, neonate N30.CNhs11200.1396-42A393.07
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I9164.20
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G63.13
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C950.25
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A191.49
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A287.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A383.07
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D773.38
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A489.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A593.67
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6101.25
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7107.18
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8115.10
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9102.00
whole body, embryo E11.CNhs11014.324-5I89.96
whole body, embryo E12.CNhs10587.857-27C920.35
whole body, embryo E13.CNhs10512.372-23H218.27
whole body, embryo E14.5.CNhs10578.420-27D211.18
whole body, embryo E14.CNhs10519.395-14B113.62
whole body, embryo E16.CNhs10514.453-14F213.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.98
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.12
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G513.14
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G515.72
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.69
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G513.20
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G513.25
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.18
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.42
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.42
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.88
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.79
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G513.36
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.98
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G516.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.74
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.47
whole body, embryo E17.5.CNhs10513.490-9F96.56
whole body, embryo E17.CNhs10517.475-3I528.48
whole body, embryo E18.CNhs10516.493-3B39.59
whole body, neonate N00.CNhs10525.657-19C28.38
whole body, neonate N01.CNhs10576.659-23C65.36
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.13e-1823
neuroblast (sensu Vertebrata)3.13e-1823
neuron2.47e-1333
neuronal stem cell2.47e-1333
neuroblast2.47e-1333
electrically signaling cell2.47e-1333
neural cell6.35e-1143
ectodermal cell1.94e-1044
neurectodermal cell1.94e-1044
electrically responsive cell8.43e-1039
electrically active cell8.43e-1039

Uber anatomy
Ontology termp-valuen
neurectoderm5.10e-3364
neural plate5.10e-3364
presumptive neural plate5.10e-3364
regional part of nervous system1.68e-3054
central nervous system3.14e-3073
nervous system9.19e-3075
neural tube2.99e-2852
neural rod2.99e-2852
future spinal cord2.99e-2852
neural keel2.99e-2852
ectoderm-derived structure4.08e-2895
ectoderm4.08e-2895
presumptive ectoderm4.08e-2895
ecto-epithelium4.31e-2773
brain1.60e-2447
future brain1.60e-2447
pre-chordal neural plate2.11e-2449
gray matter8.29e-2434
regional part of brain1.62e-2346
anterior neural tube1.14e-2040
brain grey matter5.94e-2029
regional part of telencephalon5.94e-2029
telencephalon5.94e-2029
regional part of forebrain9.58e-2039
forebrain9.58e-2039
future forebrain9.58e-2039
structure with developmental contribution from neural crest7.49e-1892
cerebral cortex1.65e-1321
cerebral hemisphere1.65e-1321
pallium1.65e-1321
regional part of cerebral cortex9.27e-1117
occipital lobe9.95e-1010
visual cortex9.95e-1010
neocortex9.95e-1010
posterior neural tube5.13e-0812
chordal neural plate5.13e-0812
basal ganglion1.05e-078
nuclear complex of neuraxis1.05e-078
aggregate regional part of brain1.05e-078
collection of basal ganglia1.05e-078
cerebral subcortex1.05e-078
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