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FFCP PHASE1:Mm9::chr15:76353005..76353021,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=170729
|EntrezGene=170729
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q99M85
|UniProt=Q99M85
|association_with_transcript=-446bp_to_ENSMUST00000096365,NM_130893,uc007wko.1_5end
|association_with_transcript=-446bp_to_ENSMUST00000096365,NM_130893,uc007wko.1_5end
|cluster_id=chr15:76353005..76353021,-
|description=CAGE_peak_2_at_Scrt1_5end
|description=CAGE_peak_2_at_Scrt1_5end
|id=chr15:76353005..76353021,-
|id=chr15:76353005..76353021,-
|ontology_enrichment_celltype=CL:0000540!3.17e-20!33;CL:0000047!3.17e-20!33;CL:0000031!3.17e-20!33;CL:0000404!3.17e-20!33;CL:0000221!4.24e-17!44;CL:0000133!4.24e-17!44;CL:0002319!1.22e-16!43;CL:0000117!1.65e-16!23;CL:0000337!1.65e-16!23;CL:0000393!7.02e-15!39;CL:0000211!7.02e-15!39;CL:0000055!3.40e-12!50
|ontology_enrichment_celltype=CL:0000540!3.17e-20!33;CL:0000047!3.17e-20!33;CL:0000031!3.17e-20!33;CL:0000404!3.17e-20!33;CL:0000221!4.24e-17!44;CL:0000133!4.24e-17!44;CL:0002319!1.22e-16!43;CL:0000117!1.65e-16!23;CL:0000337!1.65e-16!23;CL:0000393!7.02e-15!39;CL:0000211!7.02e-15!39;CL:0000055!3.40e-12!50
|ontology_enrichment_celltype_v019_2=CL:0000540,6.50e-26,33;CL:0000047,6.50e-26,33;CL:0000031,6.50e-26,33;CL:0000404,6.50e-26,33;CL:0000117,1.98e-23,23;CL:0000337,1.98e-23,23;CL:0000393,2.33e-20,39;CL:0000211,2.33e-20,39;CL:0000221,2.40e-19,44;CL:0000133,2.40e-19,44;CL:0002319,1.05e-18,43;CL:0002321,1.47e-08,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!8.92e-39!75;UBERON:0001016!8.92e-39!75;UBERON:0004121!1.21e-38!102;UBERON:0000924!1.21e-38!102;UBERON:0006601!1.21e-38!102;UBERON:0001017!2.48e-38!73;UBERON:0005743!2.48e-38!73;UBERON:0002346!1.46e-36!71;UBERON:0003075!1.46e-36!71;UBERON:0007284!1.46e-36!71;UBERON:0000033!6.95e-32!63;UBERON:0001049!1.26e-28!52;UBERON:0005068!1.26e-28!52;UBERON:0006241!1.26e-28!52;UBERON:0007135!1.26e-28!52;UBERON:0000955!8.18e-28!50;UBERON:0006238!8.18e-28!50;UBERON:0002616!5.90e-27!49;UBERON:0003056!2.55e-26!49;UBERON:0003080!1.79e-21!40;UBERON:0002780!1.32e-20!39;UBERON:0001890!1.32e-20!39;UBERON:0006240!1.32e-20!39;UBERON:0002020!1.72e-20!34;UBERON:0002791!3.83e-17!29;UBERON:0003528!3.83e-17!29;UBERON:0001893!3.83e-17!29;UBERON:0007811!1.10e-16!86;UBERON:0000153!2.18e-14!94;UBERON:0000956!1.37e-11!21;UBERON:0001869!1.37e-11!21;UBERON:0000203!1.37e-11!21;UBERON:0002619!2.98e-09!17;UBERON:0002021!1.13e-08!10;UBERON:0000411!1.13e-08!10;UBERON:0001950!1.13e-08!10;UBERON:0003076!1.44e-07!12;UBERON:0003057!1.44e-07!12;UBERON:0002420!7.11e-07!8;UBERON:0007245!7.11e-07!8;UBERON:0010009!7.11e-07!8;UBERON:0010011!7.11e-07!8;UBERON:0000454!7.11e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.77e-44,73;UBERON:0004121,9.81e-44,95;UBERON:0000924,9.81e-44,95;UBERON:0006601,9.81e-44,95;UBERON:0002346,7.66e-43,64;UBERON:0003075,7.66e-43,64;UBERON:0007284,7.66e-43,64;UBERON:0001016,2.66e-42,75;UBERON:0010371,6.45e-37,73;UBERON:0000073,7.36e-36,54;UBERON:0001049,3.95e-33,52;UBERON:0005068,3.95e-33,52;UBERON:0006241,3.95e-33,52;UBERON:0007135,3.95e-33,52;UBERON:0003056,7.51e-31,49;UBERON:0002020,5.42e-30,34;UBERON:0000955,4.87e-28,47;UBERON:0006238,4.87e-28,47;UBERON:0002616,6.81e-27,46;UBERON:0010314,8.59e-27,92;UBERON:0003528,4.58e-25,29;UBERON:0002791,4.58e-25,29;UBERON:0001893,4.58e-25,29;UBERON:0003080,5.85e-24,40;UBERON:0002780,8.98e-23,39;UBERON:0001890,8.98e-23,39;UBERON:0006240,8.98e-23,39;UBERON:0000956,6.92e-17,21;UBERON:0001869,6.92e-17,21;UBERON:0000203,6.92e-17,21;UBERON:0002619,1.88e-13,17;UBERON:0002021,5.78e-12,10;UBERON:0000411,5.78e-12,10;UBERON:0001950,5.78e-12,10;UBERON:0003076,2.14e-09,12;UBERON:0003057,2.14e-09,12;UBERON:0002420,2.44e-09,8;UBERON:0007245,2.44e-09,8;UBERON:0010009,2.44e-09,8;UBERON:0010011,2.44e-09,8;UBERON:0000454,2.44e-09,8;UBERON:0000025,6.27e-08,114;UBERON:0000970,1.71e-07,9;UBERON:0000019,1.71e-07,9;UBERON:0000047,1.71e-07,9;UBERON:0010312,1.71e-07,9;UBERON:0004088,1.71e-07,9;UBERON:0002104,1.71e-07,9;UBERON:0001456,1.71e-07,9;UBERON:0003072,1.71e-07,9;UBERON:0004128,1.71e-07,9;UBERON:0003071,1.71e-07,9;UBERON:0002240,3.09e-07,6;UBERON:0005174,3.09e-07,6;UBERON:0001137,3.09e-07,6;UBERON:0004111,3.62e-07,122
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.37824676133023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0.65407546914134,0,0,0,0,0,0,0,0,0,0,15.578367486189,13.2247744818008,15.2119536841483,0,0.889294796111139,0,0,0,0.299600110518405,1.15265491596466,3.62913643079672,6.34527910158946,6.30974884054146,11.4260393761521,10.3808214247258,8.32937434661688,5.75072826109418,5.51531271966013,40.7428759697738,52.9902453053529,50.0757298415354,9.89147157976454,6.86157327018072,8.85552729946492,37.4105218661851,22.5105044012672,20.6277634498694,10.0173719061047,8.96941589034349,11.5567656411686,0.37863096666592,0.68014404096107,0,0,0,0,0,0,0.421333260395256,0,0,0,2.25349471642689,0,0,0,0,0,0,0.5709193985953,0,1.1875371125186,0.693941307064543,0.304465478312141,0.691846491768175,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,17.5668478206928,23.6674778699204,0,0,0,0,32.3547781114417,25.1625331550245,7.53926112677186,27.4642425903797,20.9686675010871,31.7915708176127,21.415846724944,0,0,0,2.52530227063769,1.17108398666433,2.5289231487682,3.96136685571768,3.61691562805716,4.55844544313897,5.50888997224854,5.43470002446427,8.01980449290949,0,0.189106080167819,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3511662451813,2.88132914661996,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,38.0504898271067,33.5225423653701,0,0,1.26203287766503,1.95219372148319,4.30846795465598,0.716906393857656,1.55959071857676,1.13230612315533,3.23848561339915,2.63030272120181,1.58115111178609,22.8138134659483,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,4.08527526904546,0.540183282093931,0.646793418913773,0.643011105094777,0.354680467284547,1.60531935841864,0.822745103010605,0.608929898229199,0,0,0,0,0,0,0,0,0,34.6745314759653,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,1.12738587736838,0.149516546043979,0.165458490457098,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.5073071211291,17.0320337507655,14.8952833494243,10.3111909406213,21.9226406326606,25.6833925112498,14.1754725048679,19.3638117386415,23.5634052671786,27.9590568345983,7.9916257639816,9.57659696162474,2.56100408631201,1.21553358534147,1.46729213839588,1.47074806760011,0.44449345560323,0.206035057238894,0,0.252697211763798,0.25347929989024,0.943131706930381,0.468207537349412,0.960377286073039,0.976402972245426,1.42888107384922,1.15884325944855,1.54327376370964,0.824171801606613,0.294397840268795,1.02860775715625,0.177475806159338,0.715308569841963,0.872078499793971,0.846984423737976,1.26921911837515,0.73171189149109,1.57841826862706,0.543216455383447,0.561142271657738,0.711810108745045,1.18205378850676,0,0.464810523557898,0.578719832943424,2.49810577937946,0.701794825336225,0.859484216193193,0.57386499620653,0.661774257358546,0
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.37824676133023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0.65407546914134,0,0,0,0,0,0,0,0,0,0,15.578367486189,13.2247744818008,15.2119536841483,0,0.889294796111139,0,0,0,0.299600110518405,1.15265491596466,3.62913643079672,6.34527910158946,6.30974884054146,11.4260393761521,10.3808214247258,8.32937434661688,5.75072826109418,5.51531271966013,40.7428759697738,52.9902453053529,50.0757298415354,9.89147157976454,6.86157327018072,8.85552729946492,37.4105218661851,22.5105044012672,20.6277634498694,10.0173719061047,8.96941589034349,11.5567656411686,0.37863096666592,0.68014404096107,0,0,0,0,0,0,0.421333260395256,0,0,0,2.25349471642689,0,0,0,0,0,0,0.5709193985953,0,1.1875371125186,0.693941307064543,0.304465478312141,0.691846491768175,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,17.5668478206928,23.6674778699204,0,0,0,0,32.3547781114417,25.1625331550245,7.53926112677186,27.4642425903797,20.9686675010871,31.7915708176127,21.415846724944,0,0,0,2.52530227063769,1.17108398666433,2.5289231487682,3.96136685571768,3.61691562805716,4.55844544313897,5.50888997224854,5.43470002446427,8.01980449290949,0,0.189106080167819,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3511662451813,2.88132914661996,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,38.0504898271067,33.5225423653701,0,0,1.26203287766503,1.95219372148319,4.30846795465598,0.716906393857656,1.55959071857676,1.13230612315533,3.23848561339915,2.63030272120181,1.58115111178609,22.8138134659483,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,4.08527526904546,0.540183282093931,0.646793418913773,0.643011105094777,0.354680467284547,1.60531935841864,0.822745103010605,0.608929898229199,0,0,0,0,0,0,0,0,0,34.6745314759653,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,1.12738587736838,0.149516546043979,0.165458490457098,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.5073071211291,17.0320337507655,14.8952833494243,10.3111909406213,21.9226406326606,25.6833925112498,14.1754725048679,19.3638117386415,23.5634052671786,27.9590568345983,7.9916257639816,9.57659696162474,2.56100408631201,1.21553358534147,1.46729213839588,1.47074806760011,0.44449345560323,0.206035057238894,0,0.252697211763798,0.25347929989024,0.943131706930381,0.468207537349412,0.960377286073039,0.976402972245426,1.42888107384922,1.15884325944855,1.54327376370964,0.824171801606613,0.294397840268795,1.02860775715625,0.177475806159338,0.715308569841963,0.872078499793971,0.846984423737976,1.26921911837515,0.73171189149109,1.57841826862706,0.543216455383447,0.561142271657738,0.711810108745045,1.18205378850676,0,0.464810523557898,0.578719832943424,2.49810577937946,0.701794825336225,0.859484216193193,0.57386499620653,0.661774257358546,0
|short_description=p2@Scrt1
|short_description=p2@Scrt1
}}
}}

Latest revision as of 00:51, 27 September 2015

Short description:p2@Scrt1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Scrt1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -446bp_to_ENSMUST00000096365, NM_130893, uc007wko.1_5end
EntrezGene:Scrt1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Scrt1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C315.58
Mouse Granule cells, donor2.CNhs12357.11731-123E313.22
Mouse Granule cells, donor3.CNhs12108.11636-122C715.21
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.63
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.38
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.75
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D340.74
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F352.99
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D750.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.89
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.86
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.86
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E437.41
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E522.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.63
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.02
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.97
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B217.57
cerebellum, neonate N30.CNhs11135.1395-42I223.67
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A432.35
corpus striatum, adult.CNhs10487.19-21D825.16
corpus striatum, neonate N00.CNhs11226.630-43F17.54
cortex, adult.CNhs10473.12-14D527.46
cortex, neonate N30.CNhs11107.1392-42F220.97
diencephalon, adult.CNhs10482.20-12F231.79
diencephalon, neonate N30.CNhs11201.1388-42B221.42
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C93.96
eyeball, embryo E17.CNhs11023.1261-18D43.62
eyeball, neonate N00.CNhs11207.633-15C64.56
eyeball, neonate N01.CNhs11140.1532-43E75.51
eyeball, neonate N02.CNhs11205.1551-44G85.43
eyeball, neonate N16.CNhs11188.777-19A28.02
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E815.35
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C238.05
medulla oblongata, neonate N30.CNhs11200.1396-42A333.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.31
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I922.81
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G84.09
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C934.67
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A117.51
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.03
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.90
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.31
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A421.92
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A525.68
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A719.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A823.56
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A927.96
whole body, embryo E11.CNhs11014.324-5I87.99
whole body, embryo E12.CNhs10587.857-27C99.58
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron6.50e-2633
neuronal stem cell6.50e-2633
neuroblast6.50e-2633
electrically signaling cell6.50e-2633
CNS neuron (sensu Vertebrata)1.98e-2323
neuroblast (sensu Vertebrata)1.98e-2323
electrically responsive cell2.33e-2039
electrically active cell2.33e-2039
ectodermal cell2.40e-1944
neurectodermal cell2.40e-1944
neural cell1.05e-1843
embryonic cell1.47e-0870

Uber anatomy
Ontology termp-valuen
central nervous system5.77e-4473
ectoderm-derived structure9.81e-4495
ectoderm9.81e-4495
presumptive ectoderm9.81e-4495
neurectoderm7.66e-4364
neural plate7.66e-4364
presumptive neural plate7.66e-4364
nervous system2.66e-4275
ecto-epithelium6.45e-3773
regional part of nervous system7.36e-3654
neural tube3.95e-3352
neural rod3.95e-3352
future spinal cord3.95e-3352
neural keel3.95e-3352
pre-chordal neural plate7.51e-3149
gray matter5.42e-3034
brain4.87e-2847
future brain4.87e-2847
regional part of brain6.81e-2746
structure with developmental contribution from neural crest8.59e-2792
brain grey matter4.58e-2529
regional part of telencephalon4.58e-2529
telencephalon4.58e-2529
anterior neural tube5.85e-2440
regional part of forebrain8.98e-2339
forebrain8.98e-2339
future forebrain8.98e-2339
cerebral cortex6.92e-1721
cerebral hemisphere6.92e-1721
pallium6.92e-1721
regional part of cerebral cortex1.88e-1317
occipital lobe5.78e-1210
visual cortex5.78e-1210
neocortex5.78e-1210
posterior neural tube2.14e-0912
chordal neural plate2.14e-0912
basal ganglion2.44e-098
nuclear complex of neuraxis2.44e-098
aggregate regional part of brain2.44e-098
collection of basal ganglia2.44e-098
cerebral subcortex2.44e-098
tube6.27e-08114
eye1.71e-079
camera-type eye1.71e-079
simple eye1.71e-079
immature eye1.71e-079
ocular region1.71e-079
visual system1.71e-079
face1.71e-079
optic cup1.71e-079
optic vesicle1.71e-079
eye primordium1.71e-079
spinal cord3.09e-076
dorsal region element3.09e-076
dorsum3.09e-076
anatomical conduit3.62e-07122
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