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FFCP PHASE1:Mm9::chr3:146432919..146432983,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18749
|EntrezGene=18749
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P68181,P05132
|UniProt=P68181,P05132
|association_with_transcript=218bp_to_NM_001164198,uc008rrs.2_5end
|association_with_transcript=218bp_to_NM_001164198,uc008rrs.2_5end
|cluster_id=chr3:146432919..146432983,-
|description=CAGE_peak_6_at_Prkacb_5end
|description=CAGE_peak_6_at_Prkacb_5end
|id=chr3:146432919..146432983,-
|id=chr3:146432919..146432983,-
|ontology_enrichment_celltype=CL:0000117!5.25e-14!23;CL:0000337!5.25e-14!23;CL:0000540!1.25e-11!33;CL:0000047!1.25e-11!33;CL:0000031!1.25e-11!33;CL:0000404!1.25e-11!33;CL:0002319!3.70e-08!43;CL:0000393!7.49e-08!39;CL:0000211!7.49e-08!39;CL:0000221!1.12e-07!44;CL:0000133!1.12e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000117,1.11e-17,23;CL:0000337,1.11e-17,23;CL:0000540,1.54e-10,33;CL:0000047,1.54e-10,33;CL:0000031,1.54e-10,33;CL:0000404,1.54e-10,33;CL:0000393,1.14e-07,39;CL:0000211,1.14e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!4.11e-32!71;UBERON:0003075!4.11e-32!71;UBERON:0007284!4.11e-32!71;UBERON:0000033!6.08e-28!63;UBERON:0001049!6.92e-27!52;UBERON:0005068!6.92e-27!52;UBERON:0006241!6.92e-27!52;UBERON:0007135!6.92e-27!52;UBERON:0004121!7.05e-27!102;UBERON:0000924!7.05e-27!102;UBERON:0006601!7.05e-27!102;UBERON:0001017!1.07e-26!73;UBERON:0005743!1.07e-26!73;UBERON:0000073!1.17e-26!75;UBERON:0001016!1.17e-26!75;UBERON:0000955!6.45e-26!50;UBERON:0006238!6.45e-26!50;UBERON:0002616!3.32e-25!49;UBERON:0003056!2.08e-24!49;UBERON:0003080!1.87e-21!40;UBERON:0002780!1.03e-20!39;UBERON:0001890!1.03e-20!39;UBERON:0006240!1.03e-20!39;UBERON:0002020!5.65e-20!34;UBERON:0002791!3.32e-17!29;UBERON:0003528!3.32e-17!29;UBERON:0001893!3.32e-17!29;UBERON:0007811!1.93e-14!86;UBERON:0000956!4.16e-12!21;UBERON:0001869!4.16e-12!21;UBERON:0000203!4.16e-12!21;UBERON:0000153!1.58e-11!94;UBERON:0002619!5.57e-10!17;UBERON:0002021!7.01e-09!10;UBERON:0000411!7.01e-09!10;UBERON:0001950!7.01e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0002346,9.05e-35,64;UBERON:0003075,9.05e-35,64;UBERON:0007284,9.05e-35,64;UBERON:0000073,2.58e-34,54;UBERON:0001049,1.42e-32,52;UBERON:0005068,1.42e-32,52;UBERON:0006241,1.42e-32,52;UBERON:0007135,1.42e-32,52;UBERON:0003056,2.93e-29,49;UBERON:0000955,1.51e-28,47;UBERON:0006238,1.51e-28,47;UBERON:0001017,3.30e-28,73;UBERON:0010371,8.95e-28,73;UBERON:0002616,1.18e-27,46;UBERON:0001016,7.07e-27,75;UBERON:0003080,6.58e-26,40;UBERON:0002020,5.14e-25,34;UBERON:0002780,5.88e-25,39;UBERON:0001890,5.88e-25,39;UBERON:0006240,5.88e-25,39;UBERON:0004121,1.27e-24,95;UBERON:0000924,1.27e-24,95;UBERON:0006601,1.27e-24,95;UBERON:0010314,2.21e-24,92;UBERON:0003528,2.00e-21,29;UBERON:0002791,2.00e-21,29;UBERON:0001893,2.00e-21,29;UBERON:0000956,7.80e-15,21;UBERON:0001869,7.80e-15,21;UBERON:0000203,7.80e-15,21;UBERON:0002619,4.38e-12,17;UBERON:0002021,4.82e-11,10;UBERON:0000411,4.82e-11,10;UBERON:0001950,4.82e-11,10;UBERON:0002420,8.82e-08,8;UBERON:0007245,8.82e-08,8;UBERON:0010009,8.82e-08,8;UBERON:0010011,8.82e-08,8;UBERON:0000454,8.82e-08,8;UBERON:0003076,4.78e-07,12;UBERON:0003057,4.78e-07,12
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.07911256435163,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,10.9250888864183,10.5798195854407,7.60597684207415,0,0,0,0,0,0,0,6.0139975138917,5.94026128659439,7.15104868594699,10.8547374073445,7.73039893330647,8.32937434661688,9.96792898589658,11.9498442259303,29.731287869835,34.0925192687451,37.3263875812672,13.8480602116704,14.5465353327831,15.106487746146,34.3395088771699,25.8870800614573,33.768412758675,7.66034322231536,11.5321061447273,9.69277118291563,0.454357159999104,0.453429360640713,0,0,0.679971333707751,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0.776813650941515,1.92974780784272,3.29622120855658,4.56698217468212,2.30615497256059,4.06951129492081,7.2904998424137,0.879666139307728,0,0.144599356919912,0,0,0,0,0,15.8101630386235,20.7352239745321,0,0,0,0,42.3907509515648,43.0050566649509,14.827213549318,56.4929040624898,42.9601968314955,41.557608911912,40.2358332408039,0,0,0,3.78795340595653,0.130120442962704,2.06911893990126,1.80062129805349,2.26057226753573,6.80364991513279,7.55870949680614,6.09061209638237,13.7112786491678,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.787056926989615,0.154267112887378,0.232533944750408,0.536546802799238,1.75148013550754,0.329119699826961,0.492502392237286,0.405344047729279,0,0.219550115291051,0.268412837520744,33.2258118731321,13.0688857721691,0,0.264450566663544,0.426576501070468,0.464473343720877,0.515469845288373,0.605050573870028,0.22237804384487,1.14135375667535,0.474529061544512,1.15289268306808,0.251335208800269,0.397912944082302,1.36474860983384,0.898819408654221,0.216138049874694,0.597423819763102,0,0.228497025219458,0,0,0,0.210407459670956,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,51.0550876161178,49.8149668016864,0,0,0.315508219416257,0,1.93881057959519,0,0.222798674082394,0.566153061577665,0.404810701674894,0.584511715822624,0.790575555893047,30.2042037436499,0.141940085208269,0,0,0,0,0.242780636154981,0.906970670894253,1.13163047853539,0.590603785761546,0.614870295887855,0.775284879504663,2.54473610634254,1.06949213515416,0.632073515871632,0,0,5.10659408630682,1.26042765821917,0.776152102696527,1.28602221018955,2.6601035046341,2.85390108163313,3.1264313914403,4.56697423671899,0,0,0.220528398054962,0,0,0,0,0,0,54.7004640931004,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0.813277868507395,0.756037385752609,1.04544148007234,0.655087691238533,1.07891477107857,1.90102948168273,1.57053565190418,0.129614973291793,0.621339313086926,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0,0,0.147689527174577,0,0,0.201652370273681,0,0,0,0.226730383615211,0,0,0,1.15913756419314,0,0,0,0,46.8744029372165,50.6357760157895,62.4456109648942,47.2596251445141,50.6961064630275,39.2804826642644,43.8764625150674,52.2372595740096,51.6582346241993,59.0246755397075,0.726511433089237,2.79317411380722,2.56100408631201,2.18796045361465,3.14419743941973,2.5738091183002,2.889207461421,2.06035057238894,2.24643446714271,2.27427490587418,1.52087579934144,3.39527414494937,3.27745276144588,3.20125762024346,2.35485422718014,2.85776214769844,3.36064545240081,3.27945674788299,4.12085900803307,2.35518272215036,4.11443102862498,2.66213709239006,1.66905332963125,3.0522747492789,3.67026583619789,3.13074049199203,1.64635175585495,2.10455769150274,3.53090695999241,1.12228454331548,2.25406534435931,1.97008964751127,4.09231043169689,2.47898945897546,0.964533054905707,4.49659040288303,1.16965804222704,2.36358159453128,0.765153328275374,0.882365676478062,0.695603506861264
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.07911256435163,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,10.9250888864183,10.5798195854407,7.60597684207415,0,0,0,0,0,0,0,6.0139975138917,5.94026128659439,7.15104868594699,10.8547374073445,7.73039893330647,8.32937434661688,9.96792898589658,11.9498442259303,29.731287869835,34.0925192687451,37.3263875812672,13.8480602116704,14.5465353327831,15.106487746146,34.3395088771699,25.8870800614573,33.768412758675,7.66034322231536,11.5321061447273,9.69277118291563,0.454357159999104,0.453429360640713,0,0,0.679971333707751,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0.776813650941515,1.92974780784272,3.29622120855658,4.56698217468212,2.30615497256059,4.06951129492081,7.2904998424137,0.879666139307728,0,0.144599356919912,0,0,0,0,0,15.8101630386235,20.7352239745321,0,0,0,0,42.3907509515648,43.0050566649509,14.827213549318,56.4929040624898,42.9601968314955,41.557608911912,40.2358332408039,0,0,0,3.78795340595653,0.130120442962704,2.06911893990126,1.80062129805349,2.26057226753573,6.80364991513279,7.55870949680614,6.09061209638237,13.7112786491678,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.787056926989615,0.154267112887378,0.232533944750408,0.536546802799238,1.75148013550754,0.329119699826961,0.492502392237286,0.405344047729279,0,0.219550115291051,0.268412837520744,33.2258118731321,13.0688857721691,0,0.264450566663544,0.426576501070468,0.464473343720877,0.515469845288373,0.605050573870028,0.22237804384487,1.14135375667535,0.474529061544512,1.15289268306808,0.251335208800269,0.397912944082302,1.36474860983384,0.898819408654221,0.216138049874694,0.597423819763102,0,0.228497025219458,0,0,0,0.210407459670956,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,51.0550876161178,49.8149668016864,0,0,0.315508219416257,0,1.93881057959519,0,0.222798674082394,0.566153061577665,0.404810701674894,0.584511715822624,0.790575555893047,30.2042037436499,0.141940085208269,0,0,0,0,0.242780636154981,0.906970670894253,1.13163047853539,0.590603785761546,0.614870295887855,0.775284879504663,2.54473610634254,1.06949213515416,0.632073515871632,0,0,5.10659408630682,1.26042765821917,0.776152102696527,1.28602221018955,2.6601035046341,2.85390108163313,3.1264313914403,4.56697423671899,0,0,0.220528398054962,0,0,0,0,0,0,54.7004640931004,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0.813277868507395,0.756037385752609,1.04544148007234,0.655087691238533,1.07891477107857,1.90102948168273,1.57053565190418,0.129614973291793,0.621339313086926,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0,0,0.147689527174577,0,0,0.201652370273681,0,0,0,0.226730383615211,0,0,0,1.15913756419314,0,0,0,0,46.8744029372165,50.6357760157895,62.4456109648942,47.2596251445141,50.6961064630275,39.2804826642644,43.8764625150674,52.2372595740096,51.6582346241993,59.0246755397075,0.726511433089237,2.79317411380722,2.56100408631201,2.18796045361465,3.14419743941973,2.5738091183002,2.889207461421,2.06035057238894,2.24643446714271,2.27427490587418,1.52087579934144,3.39527414494937,3.27745276144588,3.20125762024346,2.35485422718014,2.85776214769844,3.36064545240081,3.27945674788299,4.12085900803307,2.35518272215036,4.11443102862498,2.66213709239006,1.66905332963125,3.0522747492789,3.67026583619789,3.13074049199203,1.64635175585495,2.10455769150274,3.53090695999241,1.12228454331548,2.25406534435931,1.97008964751127,4.09231043169689,2.47898945897546,0.964533054905707,4.49659040288303,1.16965804222704,2.36358159453128,0.765153328275374,0.882365676478062,0.695603506861264
|short_description=p6@Prkacb
|short_description=p6@Prkacb
}}
}}

Latest revision as of 18:54, 1 October 2015

Short description:p6@Prkacb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Prkacb_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 218bp_to_NM_001164198, uc008rrs.2_5end
EntrezGene:Prkacb
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Prkacb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.08
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C310.93
Mouse Granule cells, donor2.CNhs12357.11731-123E310.58
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.01
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.94
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.97
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D329.73
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F334.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D737.33
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D815.11
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E434.34
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E525.89
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I633.77
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.66
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.53
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.69
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C53.30
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F54.07
adrenal gland, neonate N00.CNhs11191.1311-23C17.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B215.81
cerebellum, neonate N30.CNhs11135.1395-42I220.74
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A442.39
corpus striatum, adult.CNhs10487.19-21D843.01
corpus striatum, neonate N00.CNhs11226.630-43F114.83
cortex, adult.CNhs10473.12-14D556.49
cortex, neonate N30.CNhs11107.1392-42F242.96
diencephalon, adult.CNhs10482.20-12F241.56
diencephalon, neonate N30.CNhs11201.1388-42B240.24
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G43.79
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C66.80
eyeball, neonate N01.CNhs11140.1532-43E77.56
eyeball, neonate N02.CNhs11205.1551-44G86.09
eyeball, neonate N16.CNhs11188.777-19A213.71
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.75
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E833.23
hippocampus, neonate N00.CNhs11228.627-43G113.07
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C251.06
medulla oblongata, neonate N30.CNhs11200.1396-42A349.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I930.20
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B92.66
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F53.13
pituitary gland, neonate N00.CNhs11190.1308-22E94.57
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C954.70
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A91.90
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A146.87
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A250.64
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A362.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D747.26
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A450.70
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A539.28
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A643.88
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A752.24
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A851.66
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A959.02
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.36
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.13
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.70





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.11e-1723
neuroblast (sensu Vertebrata)1.11e-1723
neuron1.54e-1033
neuronal stem cell1.54e-1033
neuroblast1.54e-1033
electrically signaling cell1.54e-1033
electrically responsive cell1.14e-0739
electrically active cell1.14e-0739

Uber anatomy
Ontology termp-valuen
neurectoderm9.05e-3564
neural plate9.05e-3564
presumptive neural plate9.05e-3564
regional part of nervous system2.58e-3454
neural tube1.42e-3252
neural rod1.42e-3252
future spinal cord1.42e-3252
neural keel1.42e-3252
pre-chordal neural plate2.93e-2949
brain1.51e-2847
future brain1.51e-2847
central nervous system3.30e-2873
ecto-epithelium8.95e-2873
regional part of brain1.18e-2746
nervous system7.07e-2775
anterior neural tube6.58e-2640
gray matter5.14e-2534
regional part of forebrain5.88e-2539
forebrain5.88e-2539
future forebrain5.88e-2539
ectoderm-derived structure1.27e-2495
ectoderm1.27e-2495
presumptive ectoderm1.27e-2495
structure with developmental contribution from neural crest2.21e-2492
brain grey matter2.00e-2129
regional part of telencephalon2.00e-2129
telencephalon2.00e-2129
cerebral cortex7.80e-1521
cerebral hemisphere7.80e-1521
pallium7.80e-1521
regional part of cerebral cortex4.38e-1217
occipital lobe4.82e-1110
visual cortex4.82e-1110
neocortex4.82e-1110
basal ganglion8.82e-088
nuclear complex of neuraxis8.82e-088
aggregate regional part of brain8.82e-088
collection of basal ganglia8.82e-088
cerebral subcortex8.82e-088
posterior neural tube4.78e-0712
chordal neural plate4.78e-0712
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