FFCP PHASE1:Mm9::chr11:56825226..56825237,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14799 | |EntrezGene=14799 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q7TNB5,P23818 | |UniProt=Q7TNB5,P23818 | ||
|association_with_transcript=33bp_to_uc007izr.2,uc007izs.2_5end | |association_with_transcript=33bp_to_uc007izr.2,uc007izs.2_5end | ||
|cluster_id=chr11:56825226..56825237,+ | |||
|description=CAGE_peak_6_at_Gria1_5end | |description=CAGE_peak_6_at_Gria1_5end | ||
|id=chr11:56825226..56825237,+ | |id=chr11:56825226..56825237,+ | ||
|ontology_enrichment_celltype=CL:0000117!6.20e-20!23;CL:0000337!6.20e-20!23;CL:0002319!2.19e-12!43;CL:0000540!2.47e-12!33;CL:0000047!2.47e-12!33;CL:0000031!2.47e-12!33;CL:0000404!2.47e-12!33;CL:0000221!6.90e-12!44;CL:0000133!6.90e-12!44;CL:0000055!2.35e-09!50;CL:0000393!3.19e-09!39;CL:0000211!3.19e-09!39 | |ontology_enrichment_celltype=CL:0000117!6.20e-20!23;CL:0000337!6.20e-20!23;CL:0002319!2.19e-12!43;CL:0000540!2.47e-12!33;CL:0000047!2.47e-12!33;CL:0000031!2.47e-12!33;CL:0000404!2.47e-12!33;CL:0000221!6.90e-12!44;CL:0000133!6.90e-12!44;CL:0000055!2.35e-09!50;CL:0000393!3.19e-09!39;CL:0000211!3.19e-09!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.10e-33,23;CL:0000337,2.10e-33,23;CL:0000540,7.09e-22,33;CL:0000047,7.09e-22,33;CL:0000031,7.09e-22,33;CL:0000404,7.09e-22,33;CL:0000393,8.40e-18,39;CL:0000211,8.40e-18,39;CL:0002319,1.50e-17,43;CL:0000221,4.84e-17,44;CL:0000133,4.84e-17,44;CL:0002321,5.70e-09,70;CL:0002614,1.05e-08,3;CL:0002610,4.03e-08,3;CL:0002612,8.61e-08,3;CL:0002613,2.34e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!5.29e-28!34;UBERON:0001017!2.47e-27!73;UBERON:0005743!2.47e-27!73;UBERON:0000073!4.35e-27!75;UBERON:0001016!4.35e-27!75;UBERON:0001049!5.41e-27!52;UBERON:0005068!5.41e-27!52;UBERON:0006241!5.41e-27!52;UBERON:0007135!5.41e-27!52;UBERON:0000955!2.65e-25!50;UBERON:0006238!2.65e-25!50;UBERON:0002616!2.94e-24!49;UBERON:0002791!6.70e-23!29;UBERON:0003528!6.70e-23!29;UBERON:0001893!6.70e-23!29;UBERON:0000033!3.87e-21!63;UBERON:0003080!2.02e-19!40;UBERON:0002346!2.04e-19!71;UBERON:0003075!2.04e-19!71;UBERON:0007284!2.04e-19!71;UBERON:0004121!4.95e-19!102;UBERON:0000924!4.95e-19!102;UBERON:0006601!4.95e-19!102;UBERON:0002780!1.61e-18!39;UBERON:0001890!1.61e-18!39;UBERON:0006240!1.61e-18!39;UBERON:0000956!5.50e-17!21;UBERON:0001869!5.50e-17!21;UBERON:0000203!5.50e-17!21;UBERON:0003056!7.37e-17!49;UBERON:0002619!2.03e-13!17;UBERON:0007811!3.18e-12!86;UBERON:0000153!5.36e-10!94;UBERON:0000025!1.02e-09!114;UBERON:0002021!1.23e-09!10;UBERON:0000411!1.23e-09!10;UBERON:0001950!1.23e-09!10;UBERON:0004111!1.42e-08!122;UBERON:0003076!4.43e-08!12;UBERON:0003057!4.43e-08!12;UBERON:0002240!4.74e-07!6;UBERON:0005174!4.74e-07!6;UBERON:0002298!4.74e-07!6;UBERON:0001137!4.74e-07!6;UBERON:0002420!4.87e-07!8;UBERON:0007245!4.87e-07!8;UBERON:0010009!4.87e-07!8;UBERON:0010011!4.87e-07!8;UBERON:0000454!4.87e-07!8 | |ontology_enrichment_uberon=UBERON:0002020!5.29e-28!34;UBERON:0001017!2.47e-27!73;UBERON:0005743!2.47e-27!73;UBERON:0000073!4.35e-27!75;UBERON:0001016!4.35e-27!75;UBERON:0001049!5.41e-27!52;UBERON:0005068!5.41e-27!52;UBERON:0006241!5.41e-27!52;UBERON:0007135!5.41e-27!52;UBERON:0000955!2.65e-25!50;UBERON:0006238!2.65e-25!50;UBERON:0002616!2.94e-24!49;UBERON:0002791!6.70e-23!29;UBERON:0003528!6.70e-23!29;UBERON:0001893!6.70e-23!29;UBERON:0000033!3.87e-21!63;UBERON:0003080!2.02e-19!40;UBERON:0002346!2.04e-19!71;UBERON:0003075!2.04e-19!71;UBERON:0007284!2.04e-19!71;UBERON:0004121!4.95e-19!102;UBERON:0000924!4.95e-19!102;UBERON:0006601!4.95e-19!102;UBERON:0002780!1.61e-18!39;UBERON:0001890!1.61e-18!39;UBERON:0006240!1.61e-18!39;UBERON:0000956!5.50e-17!21;UBERON:0001869!5.50e-17!21;UBERON:0000203!5.50e-17!21;UBERON:0003056!7.37e-17!49;UBERON:0002619!2.03e-13!17;UBERON:0007811!3.18e-12!86;UBERON:0000153!5.36e-10!94;UBERON:0000025!1.02e-09!114;UBERON:0002021!1.23e-09!10;UBERON:0000411!1.23e-09!10;UBERON:0001950!1.23e-09!10;UBERON:0004111!1.42e-08!122;UBERON:0003076!4.43e-08!12;UBERON:0003057!4.43e-08!12;UBERON:0002240!4.74e-07!6;UBERON:0005174!4.74e-07!6;UBERON:0002298!4.74e-07!6;UBERON:0001137!4.74e-07!6;UBERON:0002420!4.87e-07!8;UBERON:0007245!4.87e-07!8;UBERON:0010009!4.87e-07!8;UBERON:0010011!4.87e-07!8;UBERON:0000454!4.87e-07!8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.83e-42,54;UBERON:0002020,7.89e-42,34;UBERON:0001017,6.11e-38,73;UBERON:0001049,1.05e-37,52;UBERON:0005068,1.05e-37,52;UBERON:0006241,1.05e-37,52;UBERON:0007135,1.05e-37,52;UBERON:0001016,9.86e-37,75;UBERON:0003528,1.91e-31,29;UBERON:0002791,1.91e-31,29;UBERON:0001893,1.91e-31,29;UBERON:0002346,2.41e-29,64;UBERON:0003075,2.41e-29,64;UBERON:0007284,2.41e-29,64;UBERON:0000955,9.31e-29,47;UBERON:0006238,9.31e-29,47;UBERON:0004121,1.93e-27,95;UBERON:0000924,1.93e-27,95;UBERON:0006601,1.93e-27,95;UBERON:0002616,6.86e-27,46;UBERON:0003080,2.29e-26,40;UBERON:0010371,7.10e-25,73;UBERON:0002780,1.21e-24,39;UBERON:0001890,1.21e-24,39;UBERON:0006240,1.21e-24,39;UBERON:0003056,1.65e-20,49;UBERON:0000956,9.14e-19,21;UBERON:0001869,9.14e-19,21;UBERON:0000203,9.14e-19,21;UBERON:0010314,2.64e-18,92;UBERON:0002420,2.81e-14,8;UBERON:0007245,2.81e-14,8;UBERON:0010009,2.81e-14,8;UBERON:0010011,2.81e-14,8;UBERON:0000454,2.81e-14,8;UBERON:0002240,1.18e-13,6;UBERON:0005174,1.18e-13,6;UBERON:0001137,1.18e-13,6;UBERON:0000025,1.97e-13,114;UBERON:0002619,4.22e-12,17;UBERON:0004111,4.28e-12,122;UBERON:0001948,6.07e-12,5;UBERON:0002315,6.07e-12,5;UBERON:0003076,2.02e-11,12;UBERON:0003057,2.02e-11,12;UBERON:0002950,1.13e-10,4;UBERON:0001891,1.13e-10,4;UBERON:0009616,1.13e-10,4;UBERON:0010286,1.13e-10,4;UBERON:0002021,2.07e-10,10;UBERON:0000411,2.07e-10,10;UBERON:0001950,2.07e-10,10;UBERON:0011216,1.51e-09,194;UBERON:0002038,1.05e-08,3;UBERON:0009663,1.05e-08,3;UBERON:0009661,1.05e-08,3;UBERON:0000125,1.05e-08,3;UBERON:0002308,1.05e-08,3;UBERON:0004684,4.03e-08,3;UBERON:0002275,4.03e-08,3;UBERON:0002257,8.61e-08,3;UBERON:0000369,1.56e-07,5;UBERON:0002435,1.56e-07,5;UBERON:0000204,1.56e-07,5;UBERON:0010082,1.56e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.777719596297134,0,1.43752564364972,0,0,0,0,0,0,0.202316460859598,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0.768436610643109,2.38486108309499,1.08004750665353,1.68259969081106,1.71390590642282,3.09215957332259,0.857435594504678,2.49198224647415,0,1.10115880999389,7.40586560894089,5.22262213071228,1.58263545276233,3.38504281328916,1.04182674111352,2.79182999001381,6.75315132038016,7.02871939773326,2.35702868378934,3.13217697758026,1.67759501242771,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,1.46390398505774,4.60782754989601,0,0,0,0,1.9472783122627,0,2.26177833803156,1.91206752211504,1.53429274398198,0.62336413367868,3.24482526135515,0,0,0,0,0,0,0,0,0.272145996605311,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0,5.04695876553905,2.6755199218614,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0.327726629431476,0.690739927463582,0,0,0,0,0,0.80275294993896,0.937693492737625,0.819674726883377,0,0,0,0,0,0,0,0,0,0,3.21321316421807,0,0,0.488660878060728,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,1.12950368523413,2.76195141904306,0.572895513439397,3.95262319390481,1.37016503954128,0.755393897389701,0.675022500231806,2.2516060161211,1.35942722695261,2.07104124700728,0,0,0.512200817262403,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.384150914429216,0.689225627467359,0.476293691283074,0.927074607558844,0.964546102318525,0,0.735994600671987,0,0,0.715308569841963,0.145346416632329,0.376437521661322,0.25384382367503,0.182927972872773,0,0.543216455383447,0,0.237270036248348,0.492522411877817,0,0.309873682371932,0,0.249810577937946,0,0,0,0.220591419119515,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.777719596297134,0,1.43752564364972,0,0,0,0,0,0,0.202316460859598,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0.768436610643109,2.38486108309499,1.08004750665353,1.68259969081106,1.71390590642282,3.09215957332259,0.857435594504678,2.49198224647415,0,1.10115880999389,7.40586560894089,5.22262213071228,1.58263545276233,3.38504281328916,1.04182674111352,2.79182999001381,6.75315132038016,7.02871939773326,2.35702868378934,3.13217697758026,1.67759501242771,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,1.46390398505774,4.60782754989601,0,0,0,0,1.9472783122627,0,2.26177833803156,1.91206752211504,1.53429274398198,0.62336413367868,3.24482526135515,0,0,0,0,0,0,0,0,0.272145996605311,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0,5.04695876553905,2.6755199218614,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0.327726629431476,0.690739927463582,0,0,0,0,0,0.80275294993896,0.937693492737625,0.819674726883377,0,0,0,0,0,0,0,0,0,0,3.21321316421807,0,0,0.488660878060728,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,1.12950368523413,2.76195141904306,0.572895513439397,3.95262319390481,1.37016503954128,0.755393897389701,0.675022500231806,2.2516060161211,1.35942722695261,2.07104124700728,0,0,0.512200817262403,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.384150914429216,0.689225627467359,0.476293691283074,0.927074607558844,0.964546102318525,0,0.735994600671987,0,0,0.715308569841963,0.145346416632329,0.376437521661322,0.25384382367503,0.182927972872773,0,0.543216455383447,0,0.237270036248348,0.492522411877817,0,0.309873682371932,0,0.249810577937946,0,0,0,0.220591419119515,0 | ||
|short_description=p6@Gria1 | |short_description=p6@Gria1 | ||
}} | }} |
Latest revision as of 18:01, 1 October 2015
Short description: | p6@Gria1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Gria1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 33bp_to_uc007izr.2, uc007izs.2_5end |
EntrezGene: | Gria1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.10e-33 | 23 |
neuroblast (sensu Vertebrata) | 2.10e-33 | 23 |
neuron | 7.09e-22 | 33 |
neuronal stem cell | 7.09e-22 | 33 |
neuroblast | 7.09e-22 | 33 |
electrically signaling cell | 7.09e-22 | 33 |
electrically responsive cell | 8.40e-18 | 39 |
electrically active cell | 8.40e-18 | 39 |
neural cell | 1.50e-17 | 43 |
ectodermal cell | 4.84e-17 | 44 |
neurectodermal cell | 4.84e-17 | 44 |
embryonic cell | 5.70e-09 | 70 |
neuron of the substantia nigra | 1.05e-08 | 3 |
raphe nuclei neuron | 4.03e-08 | 3 |
neuron of the ventral spinal cord | 8.61e-08 | 3 |
striatum neuron | 2.34e-07 | 3 |