FFCP PHASE1:Mm9::chr11:56825334..56825345,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14799 | |EntrezGene=14799 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=362 | |||
|TSSclassifier=NA | |||
|UniProt=P23818 | |UniProt=P23818 | ||
|association_with_transcript=22bp_to_ENSMUST00000036315_5end | |association_with_transcript=22bp_to_ENSMUST00000036315_5end | ||
|cluster_id=chr11:56825334..56825345,+ | |||
|description=CAGE_peak_3_at_Gria1_5end | |description=CAGE_peak_3_at_Gria1_5end | ||
|id=chr11:56825334..56825345,+ | |id=chr11:56825334..56825345,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.44e-13!23;CL:0000337!2.44e-13!23;CL:0000540!1.19e-07!33;CL:0000047!1.19e-07!33;CL:0000031!1.19e-07!33;CL:0000404!1.19e-07!33 | |ontology_enrichment_celltype=CL:0000117!2.44e-13!23;CL:0000337!2.44e-13!23;CL:0000540!1.19e-07!33;CL:0000047!1.19e-07!33;CL:0000031!1.19e-07!33;CL:0000404!1.19e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.93e-25,23;CL:0000337,2.93e-25,23;CL:0000540,6.25e-16,33;CL:0000047,6.25e-16,33;CL:0000031,6.25e-16,33;CL:0000404,6.25e-16,33;CL:0002319,1.41e-13,43;CL:0000221,3.88e-13,44;CL:0000133,3.88e-13,44;CL:0000393,1.17e-12,39;CL:0000211,1.17e-12,39;CL:0002609,3.17e-08,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.33e-25!52;UBERON:0005068!6.33e-25!52;UBERON:0006241!6.33e-25!52;UBERON:0007135!6.33e-25!52;UBERON:0000955!3.26e-24!50;UBERON:0006238!3.26e-24!50;UBERON:0002616!2.60e-23!49;UBERON:0000033!2.84e-23!63;UBERON:0001017!7.33e-23!73;UBERON:0005743!7.33e-23!73;UBERON:0002020!1.54e-22!34;UBERON:0000073!1.44e-21!75;UBERON:0001016!1.44e-21!75;UBERON:0002346!1.49e-21!71;UBERON:0003075!1.49e-21!71;UBERON:0007284!1.49e-21!71;UBERON:0003056!3.51e-21!49;UBERON:0003080!6.44e-20!40;UBERON:0002791!2.19e-19!29;UBERON:0003528!2.19e-19!29;UBERON:0001893!2.19e-19!29;UBERON:0002780!4.53e-19!39;UBERON:0001890!4.53e-19!39;UBERON:0006240!4.53e-19!39;UBERON:0004121!8.18e-16!102;UBERON:0000924!8.18e-16!102;UBERON:0006601!8.18e-16!102;UBERON:0000956!1.25e-15!21;UBERON:0001869!1.25e-15!21;UBERON:0000203!1.25e-15!21;UBERON:0002619!2.73e-13!17;UBERON:0000025!1.92e-12!114;UBERON:0004111!3.88e-12!122;UBERON:0007811!4.40e-12!86;UBERON:0000153!8.97e-10!94;UBERON:0002021!3.49e-09!10;UBERON:0000411!3.49e-09!10;UBERON:0001950!3.49e-09!10 | |ontology_enrichment_uberon=UBERON:0001049!6.33e-25!52;UBERON:0005068!6.33e-25!52;UBERON:0006241!6.33e-25!52;UBERON:0007135!6.33e-25!52;UBERON:0000955!3.26e-24!50;UBERON:0006238!3.26e-24!50;UBERON:0002616!2.60e-23!49;UBERON:0000033!2.84e-23!63;UBERON:0001017!7.33e-23!73;UBERON:0005743!7.33e-23!73;UBERON:0002020!1.54e-22!34;UBERON:0000073!1.44e-21!75;UBERON:0001016!1.44e-21!75;UBERON:0002346!1.49e-21!71;UBERON:0003075!1.49e-21!71;UBERON:0007284!1.49e-21!71;UBERON:0003056!3.51e-21!49;UBERON:0003080!6.44e-20!40;UBERON:0002791!2.19e-19!29;UBERON:0003528!2.19e-19!29;UBERON:0001893!2.19e-19!29;UBERON:0002780!4.53e-19!39;UBERON:0001890!4.53e-19!39;UBERON:0006240!4.53e-19!39;UBERON:0004121!8.18e-16!102;UBERON:0000924!8.18e-16!102;UBERON:0006601!8.18e-16!102;UBERON:0000956!1.25e-15!21;UBERON:0001869!1.25e-15!21;UBERON:0000203!1.25e-15!21;UBERON:0002619!2.73e-13!17;UBERON:0000025!1.92e-12!114;UBERON:0004111!3.88e-12!122;UBERON:0007811!4.40e-12!86;UBERON:0000153!8.97e-10!94;UBERON:0002021!3.49e-09!10;UBERON:0000411!3.49e-09!10;UBERON:0001950!3.49e-09!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.55e-51,54;UBERON:0001049,1.09e-47,52;UBERON:0005068,1.09e-47,52;UBERON:0006241,1.09e-47,52;UBERON:0007135,1.09e-47,52;UBERON:0001017,2.31e-45,73;UBERON:0002020,4.92e-45,34;UBERON:0001016,7.57e-44,75;UBERON:0000955,3.17e-41,47;UBERON:0006238,3.17e-41,47;UBERON:0002616,2.24e-39,46;UBERON:0002346,9.51e-39,64;UBERON:0003075,9.51e-39,64;UBERON:0007284,9.51e-39,64;UBERON:0003528,3.10e-38,29;UBERON:0002791,3.10e-38,29;UBERON:0001893,3.10e-38,29;UBERON:0003080,1.72e-35,40;UBERON:0004121,8.49e-34,95;UBERON:0000924,8.49e-34,95;UBERON:0006601,8.49e-34,95;UBERON:0002780,9.78e-34,39;UBERON:0001890,9.78e-34,39;UBERON:0006240,9.78e-34,39;UBERON:0010371,1.21e-32,73;UBERON:0003056,2.75e-29,49;UBERON:0000956,3.24e-29,21;UBERON:0001869,3.24e-29,21;UBERON:0000203,3.24e-29,21;UBERON:0002619,3.71e-24,17;UBERON:0010314,1.09e-23,92;UBERON:0000025,3.51e-18,114;UBERON:0002021,6.52e-18,10;UBERON:0000411,6.52e-18,10;UBERON:0001950,6.52e-18,10;UBERON:0004111,2.79e-16,122;UBERON:0003076,9.51e-12,12;UBERON:0003057,9.51e-12,12;UBERON:0011216,2.27e-11,194;UBERON:0002420,6.92e-10,8;UBERON:0007245,6.92e-10,8;UBERON:0010009,6.92e-10,8;UBERON:0010011,6.92e-10,8;UBERON:0000454,6.92e-10,8;UBERON:0000483,6.66e-09,174;UBERON:0002240,7.46e-09,6;UBERON:0005174,7.46e-09,6;UBERON:0001137,7.46e-09,6;UBERON:0000119,1.11e-08,176;UBERON:0001954,5.37e-08,7;UBERON:0003022,5.37e-08,7;UBERON:0002421,5.37e-08,7;UBERON:0000349,5.37e-08,7;UBERON:0002600,5.37e-08,7;UBERON:0002950,8.26e-08,4;UBERON:0001891,8.26e-08,4;UBERON:0009616,8.26e-08,4;UBERON:0010286,8.26e-08,4;UBERON:0001948,1.25e-07,5;UBERON:0002315,1.25e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,1.74986909166855,0.139986421625363,1.43752564364972,0,0,0,0,0,0.515672092277442,0.809265843438391,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0,1.45165457231869,1.35005938331691,1.26194976810829,1.99955689082663,1.10434270475807,2.08234358665422,1.34183659425531,1.83843757322004,5.50579404996943,6.63974158042976,5.06901559745603,1.58263545276233,1.73826522844578,0,2.51264699101243,6.19038871034848,6.57032465440283,3.24091444021034,1.70846016958924,2.60959224155421,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,5.27005434620785,5.44561437714983,0,0,0,0,8.98743836428936,9.15001205637253,3.76963056338593,7.64827008846016,7.92717917724025,5.81806524766768,8.76102820565891,0.101839363850316,0,0,0.841767423545896,0.130120442962704,0.229902104433473,0,0.150704817835715,0.476255494059295,0.384341160854549,0.749613796477831,1.55222022443409,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.473489471170421,0.196764231747404,0.462801338662135,0.465067889500816,0.268273401399619,0.233530684734339,0.329119699826961,0,0.0810688095458557,0,0,0.134206418760372,23.5524742391823,4.01327988279209,0,0,0.213288250535234,0,0.515469845288373,0,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0,0,0,0,0.238043640886014,0,0.157635144106191,0.44292937929755,0.956728611944923,3.11340297959902,0.863424909329478,1.15719246865209,0,0,0,0,2.88991061978026,4.10240903072711,0.491804836130026,0,0,0,0.215423397732799,0,0,0,0,0,0,18.315315036043,0.425820255624806,0.178065603667255,0.162886959353576,0.494910368917606,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,1.36175842301515,0.36012218806262,0,0,0.177340233642274,0,0.493647061806363,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0.750729901804728,1.46521299413812,0.428736758158132,0,5.64751842617067,9.66682996665071,7.44764167471216,5.32744865265431,6.16574267793578,7.55393897389701,6.75022500231806,9.00642406448441,7.25027854374727,5.69536342927002,0,0,0.341467211508268,0.243106717068294,0.209613162627982,0.183843508450014,0.666740183404846,0.206035057238894,0,0,0.760437899670719,0.377252682772152,0.561849044819294,0.448176066834085,0.574354689556133,0.952587382566147,0.579421629724277,0,0,0.441596760403192,0.342869252385415,0.532427418478012,0.476872379894642,0.726732083161643,0.564656282491984,0.338458431566706,0.548783918618318,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0.492522411877817,0,0.464810523557898,0.192906610981141,1.74867404556562,0,0.429742108096597,0,0,0 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|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,1.74986909166855,0.139986421625363,1.43752564364972,0,0,0,0,0,0.515672092277442,0.809265843438391,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0,1.45165457231869,1.35005938331691,1.26194976810829,1.99955689082663,1.10434270475807,2.08234358665422,1.34183659425531,1.83843757322004,5.50579404996943,6.63974158042976,5.06901559745603,1.58263545276233,1.73826522844578,0,2.51264699101243,6.19038871034848,6.57032465440283,3.24091444021034,1.70846016958924,2.60959224155421,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,5.27005434620785,5.44561437714983,0,0,0,0,8.98743836428936,9.15001205637253,3.76963056338593,7.64827008846016,7.92717917724025,5.81806524766768,8.76102820565891,0.101839363850316,0,0,0.841767423545896,0.130120442962704,0.229902104433473,0,0.150704817835715,0.476255494059295,0.384341160854549,0.749613796477831,1.55222022443409,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.473489471170421,0.196764231747404,0.462801338662135,0.465067889500816,0.268273401399619,0.233530684734339,0.329119699826961,0,0.0810688095458557,0,0,0.134206418760372,23.5524742391823,4.01327988279209,0,0,0.213288250535234,0,0.515469845288373,0,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0,0,0,0,0.238043640886014,0,0.157635144106191,0.44292937929755,0.956728611944923,3.11340297959902,0.863424909329478,1.15719246865209,0,0,0,0,2.88991061978026,4.10240903072711,0.491804836130026,0,0,0,0.215423397732799,0,0,0,0,0,0,18.315315036043,0.425820255624806,0.178065603667255,0.162886959353576,0.494910368917606,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,1.36175842301515,0.36012218806262,0,0,0.177340233642274,0,0.493647061806363,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0.750729901804728,1.46521299413812,0.428736758158132,0,5.64751842617067,9.66682996665071,7.44764167471216,5.32744865265431,6.16574267793578,7.55393897389701,6.75022500231806,9.00642406448441,7.25027854374727,5.69536342927002,0,0,0.341467211508268,0.243106717068294,0.209613162627982,0.183843508450014,0.666740183404846,0.206035057238894,0,0,0.760437899670719,0.377252682772152,0.561849044819294,0.448176066834085,0.574354689556133,0.952587382566147,0.579421629724277,0,0,0.441596760403192,0.342869252385415,0.532427418478012,0.476872379894642,0.726732083161643,0.564656282491984,0.338458431566706,0.548783918618318,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0.492522411877817,0,0.464810523557898,0.192906610981141,1.74867404556562,0,0.429742108096597,0,0,0 | ||
|short_description=p3@Gria1 | |short_description=p3@Gria1 | ||
}} | }} |
Latest revision as of 18:01, 1 October 2015
Short description: | p3@Gria1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gria1_5end |
Coexpression cluster: | MCL_coexpression_mm9:362 |
Association with transcript: | 22bp_to_ENSMUST00000036315_5end |
EntrezGene: | Gria1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.93e-25 | 23 |
neuroblast (sensu Vertebrata) | 2.93e-25 | 23 |
neuron | 6.25e-16 | 33 |
neuronal stem cell | 6.25e-16 | 33 |
neuroblast | 6.25e-16 | 33 |
electrically signaling cell | 6.25e-16 | 33 |
neural cell | 1.41e-13 | 43 |
ectodermal cell | 3.88e-13 | 44 |
neurectodermal cell | 3.88e-13 | 44 |
electrically responsive cell | 1.17e-12 | 39 |
electrically active cell | 1.17e-12 | 39 |
neuron of cerebral cortex | 3.17e-08 | 6 |