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FFCP PHASE1:Mm9::chr15:76352740..76352781,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=170729
|EntrezGene=170729
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q99M85
|UniProt=Q99M85
|association_with_transcript=-181bp_to_ENSMUST00000096365,NM_130893,uc007wko.1_5end
|association_with_transcript=-181bp_to_ENSMUST00000096365,NM_130893,uc007wko.1_5end
|cluster_id=chr15:76352740..76352781,-
|description=CAGE_peak_5_at_Scrt1_5end
|description=CAGE_peak_5_at_Scrt1_5end
|id=chr15:76352740..76352781,-
|id=chr15:76352740..76352781,-
|ontology_enrichment_celltype=CL:0000117!2.08e-18!23;CL:0000337!2.08e-18!23;CL:0000540!2.09e-17!33;CL:0000047!2.09e-17!33;CL:0000031!2.09e-17!33;CL:0000404!2.09e-17!33;CL:0000393!6.46e-13!39;CL:0000211!6.46e-13!39;CL:0000221!1.06e-11!44;CL:0000133!1.06e-11!44;CL:0002319!2.33e-11!43;CL:0000055!2.85e-08!50;CL:0002609!7.45e-07!6
|ontology_enrichment_celltype=CL:0000117!2.08e-18!23;CL:0000337!2.08e-18!23;CL:0000540!2.09e-17!33;CL:0000047!2.09e-17!33;CL:0000031!2.09e-17!33;CL:0000404!2.09e-17!33;CL:0000393!6.46e-13!39;CL:0000211!6.46e-13!39;CL:0000221!1.06e-11!44;CL:0000133!1.06e-11!44;CL:0002319!2.33e-11!43;CL:0000055!2.85e-08!50;CL:0002609!7.45e-07!6
|ontology_enrichment_celltype_v019_2=CL:0000117,7.20e-25,23;CL:0000337,7.20e-25,23;CL:0000540,6.00e-15,33;CL:0000047,6.00e-15,33;CL:0000031,6.00e-15,33;CL:0000404,6.00e-15,33;CL:0000393,1.65e-11,39;CL:0000211,1.65e-11,39;CL:0002319,8.87e-10,43;CL:0000221,2.13e-09,44;CL:0000133,2.13e-09,44;CL:0002609,8.46e-09,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!8.72e-30!73;UBERON:0005743!8.72e-30!73;UBERON:0002346!3.68e-29!71;UBERON:0003075!3.68e-29!71;UBERON:0007284!3.68e-29!71;UBERON:0000073!2.38e-28!75;UBERON:0001016!2.38e-28!75;UBERON:0000033!5.31e-28!63;UBERON:0004121!1.13e-26!102;UBERON:0000924!1.13e-26!102;UBERON:0006601!1.13e-26!102;UBERON:0001049!1.41e-26!52;UBERON:0005068!1.41e-26!52;UBERON:0006241!1.41e-26!52;UBERON:0007135!1.41e-26!52;UBERON:0000955!1.67e-24!50;UBERON:0006238!1.67e-24!50;UBERON:0003056!3.36e-24!49;UBERON:0002616!8.11e-24!49;UBERON:0002020!7.17e-21!34;UBERON:0003080!5.16e-20!40;UBERON:0002780!2.71e-19!39;UBERON:0001890!2.71e-19!39;UBERON:0006240!2.71e-19!39;UBERON:0002791!1.74e-16!29;UBERON:0003528!1.74e-16!29;UBERON:0001893!1.74e-16!29;UBERON:0007811!5.46e-15!86;UBERON:0000956!2.54e-12!21;UBERON:0001869!2.54e-12!21;UBERON:0000203!2.54e-12!21;UBERON:0000153!4.18e-12!94;UBERON:0002619!2.45e-09!17;UBERON:0002021!1.48e-07!10;UBERON:0000411!1.48e-07!10;UBERON:0001950!1.48e-07!10;UBERON:0003076!4.53e-07!12;UBERON:0003057!4.53e-07!12
|ontology_enrichment_uberon=UBERON:0001017!8.72e-30!73;UBERON:0005743!8.72e-30!73;UBERON:0002346!3.68e-29!71;UBERON:0003075!3.68e-29!71;UBERON:0007284!3.68e-29!71;UBERON:0000073!2.38e-28!75;UBERON:0001016!2.38e-28!75;UBERON:0000033!5.31e-28!63;UBERON:0004121!1.13e-26!102;UBERON:0000924!1.13e-26!102;UBERON:0006601!1.13e-26!102;UBERON:0001049!1.41e-26!52;UBERON:0005068!1.41e-26!52;UBERON:0006241!1.41e-26!52;UBERON:0007135!1.41e-26!52;UBERON:0000955!1.67e-24!50;UBERON:0006238!1.67e-24!50;UBERON:0003056!3.36e-24!49;UBERON:0002616!8.11e-24!49;UBERON:0002020!7.17e-21!34;UBERON:0003080!5.16e-20!40;UBERON:0002780!2.71e-19!39;UBERON:0001890!2.71e-19!39;UBERON:0006240!2.71e-19!39;UBERON:0002791!1.74e-16!29;UBERON:0003528!1.74e-16!29;UBERON:0001893!1.74e-16!29;UBERON:0007811!5.46e-15!86;UBERON:0000956!2.54e-12!21;UBERON:0001869!2.54e-12!21;UBERON:0000203!2.54e-12!21;UBERON:0000153!4.18e-12!94;UBERON:0002619!2.45e-09!17;UBERON:0002021!1.48e-07!10;UBERON:0000411!1.48e-07!10;UBERON:0001950!1.48e-07!10;UBERON:0003076!4.53e-07!12;UBERON:0003057!4.53e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.09e-25,34;UBERON:0000073,2.14e-24,54;UBERON:0002346,5.05e-24,64;UBERON:0003075,5.05e-24,64;UBERON:0007284,5.05e-24,64;UBERON:0001049,2.99e-22,52;UBERON:0005068,2.99e-22,52;UBERON:0006241,2.99e-22,52;UBERON:0007135,2.99e-22,52;UBERON:0001017,3.83e-21,73;UBERON:0001016,3.29e-20,75;UBERON:0003528,8.07e-20,29;UBERON:0002791,8.07e-20,29;UBERON:0001893,8.07e-20,29;UBERON:0004121,2.04e-19,95;UBERON:0000924,2.04e-19,95;UBERON:0006601,2.04e-19,95;UBERON:0010371,2.18e-19,73;UBERON:0003056,2.83e-19,49;UBERON:0000955,2.51e-17,47;UBERON:0006238,2.51e-17,47;UBERON:0002616,1.52e-16,46;UBERON:0003080,6.52e-16,40;UBERON:0002780,4.57e-15,39;UBERON:0001890,4.57e-15,39;UBERON:0006240,4.57e-15,39;UBERON:0000956,5.96e-14,21;UBERON:0001869,5.96e-14,21;UBERON:0000203,5.96e-14,21;UBERON:0010314,1.06e-12,92;UBERON:0002619,4.90e-10,17;UBERON:0002021,2.58e-08,10;UBERON:0000411,2.58e-08,10;UBERON:0001950,2.58e-08,10;UBERON:0002240,1.12e-07,6;UBERON:0005174,1.12e-07,6;UBERON:0001137,1.12e-07,6;UBERON:0001948,2.44e-07,5;UBERON:0002315,2.44e-07,5;UBERON:0002420,4.53e-07,8;UBERON:0007245,4.53e-07,8;UBERON:0010009,4.53e-07,8;UBERON:0010011,4.53e-07,8;UBERON:0000454,4.53e-07,8;UBERON:0003076,4.60e-07,12;UBERON:0003057,4.60e-07,12;UBERON:0000369,5.91e-07,5;UBERON:0002435,5.91e-07,5;UBERON:0000204,5.91e-07,5;UBERON:0010082,5.91e-07,5
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,3.40173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,17.3992156339254,15.869729378161,15.8457850876545,0,0,0,0,0,0,0,7.77672092313582,7.42532660824299,7.57169860864975,5.99867067247988,10.1599528837742,16.4137670948038,20.5109307979026,18.3843757322004,3.30347642998166,2.93680877595932,2.91852413186863,11.8697658957174,11.4359554503012,13.022834263919,3.07101298901519,0,1.37518422999129,10.9012576625257,9.5389026135399,12.1159639786445,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.845060518660083,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.173485326766136,0,0.461230994512117,0,0.23517741427141,0,0,0,0,0,0,0,0,2.34224637609238,5.23616767033638,0,0,0,0,3.2953940669061,1.83000241127451,7.91622418311046,2.60736480288415,1.79000820131231,1.66230435647648,1.62241263067758,0,0,0,0,0.780722657776222,1.37941262660084,7.20248519221397,3.76762044589288,4.69451844144162,5.38077625196369,3.09215691047105,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,4.52780294468852,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,0.703270119553219,0,0,0.315508219416257,0,0.646270193198397,0,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,2.89189184779626,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.36012218806262,0.646793418913773,0.428674070063185,0.354680467284547,0.535106452806212,0.822745103010605,0.304464949114599,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0.206386867963223,0,0,0,0,0,0,0,0,0.474503990371703,0,0,0,0,0,0,0,0,0,15.2197093444731,0,0,0,0,0,0,0,0,0.483168241652012,6.91272015018877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,3.68260189205742,5.15605962095457,2.92150409984269,2.05524755931193,2.2661816921691,0.675022500231806,3.15224842256954,2.71885445390523,5.1776031175182,1.97195960409936,7.58147259461959,2.90247129782028,1.70174701947806,2.09613162627982,2.38996560985018,1.55572709461131,1.23621034343337,1.60459604795908,1.01078884705519,1.77435509923168,1.32038438970253,0.936415074698824,1.34452820050225,1.14870937911227,0.476293691283074,1.0429589335037,1.92909220463705,0.824171801606613,1.17759136107518,1.37147700954166,1.4198064492747,0.715308569841963,1.16277133305863,1.2234219453993,1.4384483341585,2.0122077016005,2.89376682581627,2.03706170768793,1.12228454331548,1.54225523561426,1.0835493061312,0.409231043169689,0.619747364743864,1.73615949883027,4.49659040288303,0.935726433781634,1.71896843238639,0.191288332068843,0.220591419119515,0
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,3.40173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,17.3992156339254,15.869729378161,15.8457850876545,0,0,0,0,0,0,0,7.77672092313582,7.42532660824299,7.57169860864975,5.99867067247988,10.1599528837742,16.4137670948038,20.5109307979026,18.3843757322004,3.30347642998166,2.93680877595932,2.91852413186863,11.8697658957174,11.4359554503012,13.022834263919,3.07101298901519,0,1.37518422999129,10.9012576625257,9.5389026135399,12.1159639786445,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.845060518660083,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.173485326766136,0,0.461230994512117,0,0.23517741427141,0,0,0,0,0,0,0,0,2.34224637609238,5.23616767033638,0,0,0,0,3.2953940669061,1.83000241127451,7.91622418311046,2.60736480288415,1.79000820131231,1.66230435647648,1.62241263067758,0,0,0,0,0.780722657776222,1.37941262660084,7.20248519221397,3.76762044589288,4.69451844144162,5.38077625196369,3.09215691047105,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,4.52780294468852,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,0.703270119553219,0,0,0.315508219416257,0,0.646270193198397,0,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,2.89189184779626,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.36012218806262,0.646793418913773,0.428674070063185,0.354680467284547,0.535106452806212,0.822745103010605,0.304464949114599,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0.206386867963223,0,0,0,0,0,0,0,0,0.474503990371703,0,0,0,0,0,0,0,0,0,15.2197093444731,0,0,0,0,0,0,0,0,0.483168241652012,6.91272015018877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,3.68260189205742,5.15605962095457,2.92150409984269,2.05524755931193,2.2661816921691,0.675022500231806,3.15224842256954,2.71885445390523,5.1776031175182,1.97195960409936,7.58147259461959,2.90247129782028,1.70174701947806,2.09613162627982,2.38996560985018,1.55572709461131,1.23621034343337,1.60459604795908,1.01078884705519,1.77435509923168,1.32038438970253,0.936415074698824,1.34452820050225,1.14870937911227,0.476293691283074,1.0429589335037,1.92909220463705,0.824171801606613,1.17759136107518,1.37147700954166,1.4198064492747,0.715308569841963,1.16277133305863,1.2234219453993,1.4384483341585,2.0122077016005,2.89376682581627,2.03706170768793,1.12228454331548,1.54225523561426,1.0835493061312,0.409231043169689,0.619747364743864,1.73615949883027,4.49659040288303,0.935726433781634,1.71896843238639,0.191288332068843,0.220591419119515,0
|short_description=p5@Scrt1
|short_description=p5@Scrt1
}}
}}

Latest revision as of 00:49, 27 September 2015

Short description:p5@Scrt1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Scrt1_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -181bp_to_ENSMUST00000096365, NM_130893, uc007wko.1_5end
EntrezGene:Scrt1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Scrt1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C317.40
Mouse Granule cells, donor2.CNhs12357.11731-123E315.87
Mouse Granule cells, donor3.CNhs12108.11636-122C715.85
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.78
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.57
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.16
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D216.41
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F220.51
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D618.38
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.87
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.44
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.02
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.90
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.54
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I25.24
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.30
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F17.92
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C97.20
eyeball, embryo E17.CNhs11023.1261-18D43.77
eyeball, neonate N00.CNhs11207.633-15C64.69
eyeball, neonate N01.CNhs11140.1532-43E75.38
eyeball, neonate N02.CNhs11205.1551-44G83.09
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G14.53
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G515.22
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E26.91
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I81.97
whole body, embryo E12.CNhs10587.857-27C97.58
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter1.09e-2534
regional part of nervous system2.14e-2454
neurectoderm5.05e-2464
neural plate5.05e-2464
presumptive neural plate5.05e-2464
neural tube2.99e-2252
neural rod2.99e-2252
future spinal cord2.99e-2252
neural keel2.99e-2252
central nervous system3.83e-2173
nervous system3.29e-2075
brain grey matter8.07e-2029
regional part of telencephalon8.07e-2029
telencephalon8.07e-2029
ectoderm-derived structure2.04e-1995
ectoderm2.04e-1995
presumptive ectoderm2.04e-1995
ecto-epithelium2.18e-1973
pre-chordal neural plate2.83e-1949
brain2.51e-1747
future brain2.51e-1747
regional part of brain1.52e-1646
anterior neural tube6.52e-1640
regional part of forebrain4.57e-1539
forebrain4.57e-1539
future forebrain4.57e-1539
cerebral cortex5.96e-1421
cerebral hemisphere5.96e-1421
pallium5.96e-1421
structure with developmental contribution from neural crest1.06e-1292
regional part of cerebral cortex4.90e-1017
occipital lobe2.58e-0810
visual cortex2.58e-0810
neocortex2.58e-0810
spinal cord1.12e-076
dorsal region element1.12e-076
dorsum1.12e-076
regional part of spinal cord2.44e-075
gray matter of spinal cord2.44e-075
basal ganglion4.53e-078
nuclear complex of neuraxis4.53e-078
aggregate regional part of brain4.53e-078
collection of basal ganglia4.53e-078
cerebral subcortex4.53e-078
posterior neural tube4.60e-0712
chordal neural plate4.60e-0712
corpus striatum5.91e-075
striatum5.91e-075
ventral part of telencephalon5.91e-075
future corpus striatum5.91e-075
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