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FFCP PHASE1:Mm9::chr7:64845896..64845923,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14402
|EntrezGene=14402
|HGNC=
|HGNC=
|MCL_coexpression_id=288
|TSSclassifier=NA
|UniProt=Q8C446
|UniProt=Q8C446
|association_with_transcript=0bp_to_NM_001038701,uc009hed.1_5end
|association_with_transcript=0bp_to_NM_001038701,uc009hed.1_5end
|cluster_id=chr7:64845896..64845923,+
|description=CAGE_peak_2_at_Gabrb3_5end
|description=CAGE_peak_2_at_Gabrb3_5end
|id=chr7:64845896..64845923,+
|id=chr7:64845896..64845923,+
|ontology_enrichment_celltype=CL:0000540!5.06e-15!33;CL:0000047!5.06e-15!33;CL:0000031!5.06e-15!33;CL:0000404!5.06e-15!33;CL:0000117!6.69e-13!23;CL:0000337!6.69e-13!23;CL:0000393!1.68e-10!39;CL:0000211!1.68e-10!39;CL:0002319!1.93e-10!43;CL:0000221!2.30e-10!44;CL:0000133!2.30e-10!44;CL:0000055!4.21e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,9.89e-15,23;CL:0000337,9.89e-15,23;CL:0000540,1.58e-13,33;CL:0000047,1.58e-13,33;CL:0000031,1.58e-13,33;CL:0000404,1.58e-13,33;CL:0000393,2.87e-10,39;CL:0000211,2.87e-10,39;CL:0002319,1.23e-08,43;CL:0000221,2.80e-08,44;CL:0000133,2.80e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!8.52e-30!73;UBERON:0005743!8.52e-30!73;UBERON:0000073!9.59e-29!75;UBERON:0001016!9.59e-29!75;UBERON:0002346!6.84e-28!71;UBERON:0003075!6.84e-28!71;UBERON:0007284!6.84e-28!71;UBERON:0004121!8.34e-26!102;UBERON:0000924!8.34e-26!102;UBERON:0006601!8.34e-26!102;UBERON:0001049!3.59e-25!52;UBERON:0005068!3.59e-25!52;UBERON:0006241!3.59e-25!52;UBERON:0007135!3.59e-25!52;UBERON:0000955!1.54e-23!50;UBERON:0006238!1.54e-23!50;UBERON:0000033!2.07e-23!63;UBERON:0002616!1.08e-22!49;UBERON:0003056!4.10e-21!49;UBERON:0002020!4.46e-21!34;UBERON:0003080!1.47e-20!40;UBERON:0002780!5.69e-20!39;UBERON:0001890!5.69e-20!39;UBERON:0006240!5.69e-20!39;UBERON:0002791!1.77e-17!29;UBERON:0003528!1.77e-17!29;UBERON:0001893!1.77e-17!29;UBERON:0000956!1.38e-12!21;UBERON:0001869!1.38e-12!21;UBERON:0000203!1.38e-12!21;UBERON:0007811!3.07e-12!86;UBERON:0002619!1.78e-11!17;UBERON:0000153!1.30e-10!94;UBERON:0002021!6.42e-09!10;UBERON:0000411!6.42e-09!10;UBERON:0001950!6.42e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.24e-31,73;UBERON:0000073,1.28e-30,54;UBERON:0001016,2.61e-30,75;UBERON:0001049,8.07e-29,52;UBERON:0005068,8.07e-29,52;UBERON:0006241,8.07e-29,52;UBERON:0007135,8.07e-29,52;UBERON:0002346,9.33e-28,64;UBERON:0003075,9.33e-28,64;UBERON:0007284,9.33e-28,64;UBERON:0002020,1.74e-24,34;UBERON:0004121,5.26e-24,95;UBERON:0000924,5.26e-24,95;UBERON:0006601,5.26e-24,95;UBERON:0000955,6.68e-24,47;UBERON:0006238,6.68e-24,47;UBERON:0002616,9.27e-23,46;UBERON:0010371,2.27e-22,73;UBERON:0003080,3.23e-21,40;UBERON:0002780,2.15e-20,39;UBERON:0001890,2.15e-20,39;UBERON:0006240,2.15e-20,39;UBERON:0003056,1.25e-19,49;UBERON:0003528,2.54e-19,29;UBERON:0002791,2.54e-19,29;UBERON:0001893,2.54e-19,29;UBERON:0010314,1.35e-14,92;UBERON:0002619,2.96e-14,17;UBERON:0002021,1.29e-12,10;UBERON:0000411,1.29e-12,10;UBERON:0001950,1.29e-12,10;UBERON:0000956,2.51e-12,21;UBERON:0001869,2.51e-12,21;UBERON:0000203,2.51e-12,21;UBERON:0002420,1.96e-08,8;UBERON:0007245,1.96e-08,8;UBERON:0010009,1.96e-08,8;UBERON:0010011,1.96e-08,8;UBERON:0000454,1.96e-08,8;UBERON:0003076,5.22e-08,12;UBERON:0003057,5.22e-08,12;UBERON:0002240,2.31e-07,6;UBERON:0005174,2.31e-07,6;UBERON:0001137,2.31e-07,6
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.58328969722285,0.139986421625363,0,0,0,0,0,0,0,2.42779753031517,5.28990979272033,1.90149421051854,0,0,0,0,0,0,0,0.829516898467821,0.945041568321835,0.630974884054146,5.99867067247988,7.06779331045163,5.26710436624302,2.58782771749238,1.83843757322004,3.30347642998166,4.21368215681119,3.07213066512487,4.61602007055678,4.11694396210843,3.64639359389732,1.11673199600552,3.93933827022176,4.73674568108111,12.374400589894,15.9456282494995,5.40558392893372,0,0.0755715601067855,0,0,0,0,0,0,1.12355536105401,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.173485326766136,0.608930956624282,0.461230994512117,0.301445281105245,0.470354828542819,0.628332956648377,0,0,0,0.323533699894818,0,0,0,3.80615036115011,3.97948742945565,0,0,0,0,3.2953940669061,19.6725259212009,43.6020601831639,18.251553620189,25.5715457330331,6.02585329222724,12.8170597823529,0.101839363850316,0,0,0,0.260240885925407,0.459804208866946,0.540186389416048,0.30140963567143,1.15662048557257,1.40925092313335,1.78033276663485,1.29351685369508,0,0,0,0.219195732427575,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0.473489471170421,0.393528463494808,0.154267112887378,0,0,0,0,0,0,0,0,0,21.2392848049769,13.1717903845484,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.658795818896044,0.754005626400808,0.596869416123452,0.58489226135736,0,0,0,0,0,0,0.203651327845314,0,0,0.126473074248515,0.442830443938806,0.31399745568275,0.246794327843601,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05046120976805,1.52375192569864,0,0,0.94652465824877,2.34263246577983,1.29254038639679,1.43381278771531,0.668396022247182,0.849229592366497,0.404810701674894,2.33804686329049,1.18586333383957,29.5615611108062,0,0.178065603667255,0,0,0,0,0.302323556964751,0.377210159511796,0.295301892880773,0.614870295887855,0,0.363533729477506,0,0,0,0,2.38307724027652,0.36012218806262,0,0.857348140126369,3.01478397191865,2.14042581122485,1.15184314421485,0.913394847343798,0,0,0,0,0,0.0603129249281559,0,0,0,3.8939313422207,0,0.412773735926445,0,0,0,0,0,0,0.138199973804424,0,0.316335993581135,0.813277868507395,0.216010681643603,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0.621339313086926,0,0.149516546043979,0.330916980914195,0,0.129159823477731,0.168956125490778,0.117357238645754,0.39061315453185,0.209718688851422,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,0,0.183151624267265,0.214368379079066,0,22.0253218620656,31.7624413189952,28.6447756719698,23.3720327987415,18.4972280338073,12.8416962556249,22.2757425076496,12.6089936902782,16.3131267234314,10.3552062350364,0.415149390336707,0.399024873401031,0.682934423016537,1.70174701947806,1.25767897576789,0.735374033800057,2.889207461421,1.44224540067226,1.28367683836726,4.54854981174835,1.52087579934144,2.64076877940507,1.96647165686753,2.17685518176556,3.21638626151434,2.85776214769844,2.20180219295225,2.31491064556446,2.47251540481984,2.35518272215036,1.71434626192708,1.77475806159337,1.1921809497366,1.59881058295561,2.07040636913727,1.86152137361688,2.0122077016005,1.05227884575137,1.22223702461276,3.36685362994643,1.54225523561426,1.97008964751127,1.63692417267876,2.94379998253335,2.12197272079256,3.74715866906919,1.40358965067245,3.86767897286937,0.765153328275374,0.220591419119515,0.231867835620421
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.58328969722285,0.139986421625363,0,0,0,0,0,0,0,2.42779753031517,5.28990979272033,1.90149421051854,0,0,0,0,0,0,0,0.829516898467821,0.945041568321835,0.630974884054146,5.99867067247988,7.06779331045163,5.26710436624302,2.58782771749238,1.83843757322004,3.30347642998166,4.21368215681119,3.07213066512487,4.61602007055678,4.11694396210843,3.64639359389732,1.11673199600552,3.93933827022176,4.73674568108111,12.374400589894,15.9456282494995,5.40558392893372,0,0.0755715601067855,0,0,0,0,0,0,1.12355536105401,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.173485326766136,0.608930956624282,0.461230994512117,0.301445281105245,0.470354828542819,0.628332956648377,0,0,0,0.323533699894818,0,0,0,3.80615036115011,3.97948742945565,0,0,0,0,3.2953940669061,19.6725259212009,43.6020601831639,18.251553620189,25.5715457330331,6.02585329222724,12.8170597823529,0.101839363850316,0,0,0,0.260240885925407,0.459804208866946,0.540186389416048,0.30140963567143,1.15662048557257,1.40925092313335,1.78033276663485,1.29351685369508,0,0,0,0.219195732427575,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0.473489471170421,0.393528463494808,0.154267112887378,0,0,0,0,0,0,0,0,0,21.2392848049769,13.1717903845484,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.658795818896044,0.754005626400808,0.596869416123452,0.58489226135736,0,0,0,0,0,0,0.203651327845314,0,0,0.126473074248515,0.442830443938806,0.31399745568275,0.246794327843601,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05046120976805,1.52375192569864,0,0,0.94652465824877,2.34263246577983,1.29254038639679,1.43381278771531,0.668396022247182,0.849229592366497,0.404810701674894,2.33804686329049,1.18586333383957,29.5615611108062,0,0.178065603667255,0,0,0,0,0.302323556964751,0.377210159511796,0.295301892880773,0.614870295887855,0,0.363533729477506,0,0,0,0,2.38307724027652,0.36012218806262,0,0.857348140126369,3.01478397191865,2.14042581122485,1.15184314421485,0.913394847343798,0,0,0,0,0,0.0603129249281559,0,0,0,3.8939313422207,0,0.412773735926445,0,0,0,0,0,0,0.138199973804424,0,0.316335993581135,0.813277868507395,0.216010681643603,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0.621339313086926,0,0.149516546043979,0.330916980914195,0,0.129159823477731,0.168956125490778,0.117357238645754,0.39061315453185,0.209718688851422,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,0,0.183151624267265,0.214368379079066,0,22.0253218620656,31.7624413189952,28.6447756719698,23.3720327987415,18.4972280338073,12.8416962556249,22.2757425076496,12.6089936902782,16.3131267234314,10.3552062350364,0.415149390336707,0.399024873401031,0.682934423016537,1.70174701947806,1.25767897576789,0.735374033800057,2.889207461421,1.44224540067226,1.28367683836726,4.54854981174835,1.52087579934144,2.64076877940507,1.96647165686753,2.17685518176556,3.21638626151434,2.85776214769844,2.20180219295225,2.31491064556446,2.47251540481984,2.35518272215036,1.71434626192708,1.77475806159337,1.1921809497366,1.59881058295561,2.07040636913727,1.86152137361688,2.0122077016005,1.05227884575137,1.22223702461276,3.36685362994643,1.54225523561426,1.97008964751127,1.63692417267876,2.94379998253335,2.12197272079256,3.74715866906919,1.40358965067245,3.86767897286937,0.765153328275374,0.220591419119515,0.231867835620421
|short_description=p2@Gabrb3
|short_description=p2@Gabrb3
}}
}}

Latest revision as of 23:54, 26 September 2015

Short description:p2@Gabrb3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gabrb3_5end
Coexpression cluster:MCL_coexpression_mm9:288
Association with transcript: 0bp_to_NM_001038701, uc009hed.1_5end
EntrezGene:Gabrb3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gabrb3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.07
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.27
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.59
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.62
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.12
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.95
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.41
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.30
corpus striatum, adult.CNhs10487.19-21D819.67
corpus striatum, neonate N00.CNhs11226.630-43F143.60
cortex, adult.CNhs10473.12-14D518.25
cortex, neonate N30.CNhs11107.1392-42F225.57
diencephalon, adult.CNhs10482.20-12F26.03
diencephalon, neonate N30.CNhs11201.1388-42B212.82
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E821.24
hippocampus, neonate N00.CNhs11228.627-43G113.17
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I929.56
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.03
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A231.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A328.64
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D723.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A418.50
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A622.28
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.61
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A816.31
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.22
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C23.87
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.89e-1523
neuroblast (sensu Vertebrata)9.89e-1523
neuron1.58e-1333
neuronal stem cell1.58e-1333
neuroblast1.58e-1333
electrically signaling cell1.58e-1333
electrically responsive cell2.87e-1039
electrically active cell2.87e-1039
neural cell1.23e-0843
ectodermal cell2.80e-0844
neurectodermal cell2.80e-0844

Uber anatomy
Ontology termp-valuen
central nervous system1.24e-3173
regional part of nervous system1.28e-3054
nervous system2.61e-3075
neural tube8.07e-2952
neural rod8.07e-2952
future spinal cord8.07e-2952
neural keel8.07e-2952
neurectoderm9.33e-2864
neural plate9.33e-2864
presumptive neural plate9.33e-2864
gray matter1.74e-2434
ectoderm-derived structure5.26e-2495
ectoderm5.26e-2495
presumptive ectoderm5.26e-2495
brain6.68e-2447
future brain6.68e-2447
regional part of brain9.27e-2346
ecto-epithelium2.27e-2273
anterior neural tube3.23e-2140
regional part of forebrain2.15e-2039
forebrain2.15e-2039
future forebrain2.15e-2039
pre-chordal neural plate1.25e-1949
brain grey matter2.54e-1929
regional part of telencephalon2.54e-1929
telencephalon2.54e-1929
structure with developmental contribution from neural crest1.35e-1492
regional part of cerebral cortex2.96e-1417
occipital lobe1.29e-1210
visual cortex1.29e-1210
neocortex1.29e-1210
cerebral cortex2.51e-1221
cerebral hemisphere2.51e-1221
pallium2.51e-1221
basal ganglion1.96e-088
nuclear complex of neuraxis1.96e-088
aggregate regional part of brain1.96e-088
collection of basal ganglia1.96e-088
cerebral subcortex1.96e-088
posterior neural tube5.22e-0812
chordal neural plate5.22e-0812
spinal cord2.31e-076
dorsal region element2.31e-076
dorsum2.31e-076
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