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FFCP PHASE1:Mm9::chr17:72953973..72953985,-: Difference between revisions

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|id=chr17:72953973..72953985,-
|id=chr17:72953973..72953985,-
|ontology_enrichment_celltype=CL:0000540!1.04e-20!33;CL:0000047!1.04e-20!33;CL:0000031!1.04e-20!33;CL:0000404!1.04e-20!33;CL:0000393!4.29e-15!39;CL:0000211!4.29e-15!39;CL:0002319!3.60e-14!43;CL:0000221!1.69e-13!44;CL:0000133!1.69e-13!44;CL:0000117!2.11e-13!23;CL:0000337!2.11e-13!23;CL:0000055!4.05e-10!50;CL:0000107!7.49e-09!9
|ontology_enrichment_celltype=CL:0000540!1.04e-20!33;CL:0000047!1.04e-20!33;CL:0000031!1.04e-20!33;CL:0000404!1.04e-20!33;CL:0000393!4.29e-15!39;CL:0000211!4.29e-15!39;CL:0002319!3.60e-14!43;CL:0000221!1.69e-13!44;CL:0000133!1.69e-13!44;CL:0000117!2.11e-13!23;CL:0000337!2.11e-13!23;CL:0000055!4.05e-10!50;CL:0000107!7.49e-09!9
|ontology_enrichment_celltype_v019_2=CL:0000540,5.39e-32,33;CL:0000047,5.39e-32,33;CL:0000031,5.39e-32,33;CL:0000404,5.39e-32,33;CL:0000393,1.13e-25,39;CL:0000211,1.13e-25,39;CL:0002319,1.89e-22,43;CL:0000221,9.74e-22,44;CL:0000133,9.74e-22,44;CL:0000117,1.21e-19,23;CL:0000337,1.21e-19,23;CL:0000107,4.49e-15,9;CL:0002321,1.64e-10,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.49e-24!73;UBERON:0005743!3.49e-24!73;UBERON:0000073!1.98e-23!75;UBERON:0001016!1.98e-23!75;UBERON:0004121!1.21e-20!102;UBERON:0000924!1.21e-20!102;UBERON:0006601!1.21e-20!102;UBERON:0002346!1.02e-18!71;UBERON:0003075!1.02e-18!71;UBERON:0007284!1.02e-18!71;UBERON:0001049!2.62e-14!52;UBERON:0005068!2.62e-14!52;UBERON:0006241!2.62e-14!52;UBERON:0007135!2.62e-14!52;UBERON:0000033!9.94e-14!63;UBERON:0000955!4.17e-13!50;UBERON:0006238!4.17e-13!50;UBERON:0002616!1.82e-12!49;UBERON:0003056!2.91e-12!49;UBERON:0003080!9.34e-11!40;UBERON:0002780!3.71e-10!39;UBERON:0001890!3.71e-10!39;UBERON:0006240!3.71e-10!39;UBERON:0002020!4.61e-10!34;UBERON:0002410!7.49e-09!9;UBERON:0000010!3.32e-07!11;UBERON:0002791!6.27e-07!29;UBERON:0003528!6.27e-07!29;UBERON:0001893!6.27e-07!29;UBERON:0007811!6.54e-07!86
|ontology_enrichment_uberon=UBERON:0001017!3.49e-24!73;UBERON:0005743!3.49e-24!73;UBERON:0000073!1.98e-23!75;UBERON:0001016!1.98e-23!75;UBERON:0004121!1.21e-20!102;UBERON:0000924!1.21e-20!102;UBERON:0006601!1.21e-20!102;UBERON:0002346!1.02e-18!71;UBERON:0003075!1.02e-18!71;UBERON:0007284!1.02e-18!71;UBERON:0001049!2.62e-14!52;UBERON:0005068!2.62e-14!52;UBERON:0006241!2.62e-14!52;UBERON:0007135!2.62e-14!52;UBERON:0000033!9.94e-14!63;UBERON:0000955!4.17e-13!50;UBERON:0006238!4.17e-13!50;UBERON:0002616!1.82e-12!49;UBERON:0003056!2.91e-12!49;UBERON:0003080!9.34e-11!40;UBERON:0002780!3.71e-10!39;UBERON:0001890!3.71e-10!39;UBERON:0006240!3.71e-10!39;UBERON:0002020!4.61e-10!34;UBERON:0002410!7.49e-09!9;UBERON:0000010!3.32e-07!11;UBERON:0002791!6.27e-07!29;UBERON:0003528!6.27e-07!29;UBERON:0001893!6.27e-07!29;UBERON:0007811!6.54e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.31e-30,73;UBERON:0001016,1.90e-29,75;UBERON:0004121,7.51e-22,95;UBERON:0000924,7.51e-22,95;UBERON:0006601,7.51e-22,95;UBERON:0000073,7.31e-18,54;UBERON:0002346,3.56e-15,64;UBERON:0003075,3.56e-15,64;UBERON:0007284,3.56e-15,64;UBERON:0002410,4.49e-15,9;UBERON:0001049,1.75e-14,52;UBERON:0005068,1.75e-14,52;UBERON:0006241,1.75e-14,52;UBERON:0007135,1.75e-14,52;UBERON:0010371,3.43e-12,73;UBERON:0000010,7.18e-12,11;UBERON:0002020,1.06e-11,34;UBERON:0003080,3.45e-11,40;UBERON:0000955,6.00e-11,47;UBERON:0006238,6.00e-11,47;UBERON:0002780,2.75e-10,39;UBERON:0001890,2.75e-10,39;UBERON:0006240,2.75e-10,39;UBERON:0002616,4.57e-10,46;UBERON:0010314,1.95e-09,92;UBERON:0003056,4.36e-09,49;UBERON:0011216,1.18e-08,194;UBERON:0001948,1.51e-08,5;UBERON:0002315,1.51e-08,5;UBERON:0002420,6.51e-08,8;UBERON:0007245,6.51e-08,8;UBERON:0010009,6.51e-08,8;UBERON:0010011,6.51e-08,8;UBERON:0000454,6.51e-08,8;UBERON:0002240,5.36e-07,6;UBERON:0005174,5.36e-07,6;UBERON:0001137,5.36e-07,6;UBERON:0003528,7.05e-07,29;UBERON:0002791,7.05e-07,29;UBERON:0001893,7.05e-07,29
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,3.64169629547276,5.81890077199236,6.33831403506179,0,0,0,0,0,0,0,1.45165457231869,0.540023753326763,1.68259969081106,8.2838785477103,7.95126747425809,0.979926393719632,0.287536413054709,0,3.30347642998166,2.17068474744819,2.61131106535614,2.50583946687368,2.92760459527711,4.16730696445408,1.67509799400829,1.68828783009504,1.83357897332172,5.59794312399969,7.11858403995515,5.59198337475902,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08182392119363,1.52232739156071,0.461230994512117,0.301445281105245,0.705532242814229,0,0,0,0,0,0,0,0,0.292780797011547,0,0.255457055208591,0,0,0,3.14560342750128,0.457500602818626,1.63350657746724,1.73824320192276,1.53429274398198,1.87009240103604,2.75810147215188,0,0,0,0,0.130120442962704,0.459804208866946,0.720248519221397,0.30140963567143,0.95251098811859,0.768682321709099,0.749613796477831,2.06962696591213,0,0,0.703804496655795,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,1.68231958851302,1.13195073617213,0.660837565967596,0,0.639864751605702,0.464473343720877,1.28867461322093,0.80673409849337,0.667134131534611,1.33157938278791,0.949058123089023,0.164698954724011,0.251335208800269,0.795825888164603,0.19496408711912,0.898819408654221,0,0.597423819763102,0,0.342745537829186,0,0,0.193952487167626,0.210407459670956,0,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13694847062291,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,1.9266070798535,0.937693492737625,0,0,5.36363973007636,8.58965237452605,10.7711698866399,23.4189421993501,36.0933852013478,50.9537755419898,19.8357243820698,28.0565623594859,26.4842811224171,4.4984984299053,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0.632073515871632,0,0,8.85142974959849,0.18006109403131,0.388076051348264,0.857348140126369,4.43350584105684,2.14042581122485,1.48094118541909,0,0,0,0,0,0,0,0,0,0.291480836629851,0.741701208042039,0,0.206386867963223,0,0,0,0,0,0,0,0,1.89801596148681,1.42323626988794,1.72808545314882,1.46361807210128,1.31017538247707,0.809186078308924,1.48776220305605,0.785267825952089,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0.920650473014354,1.71868654031819,1.03111909406213,2.74033007908257,0,0.675022500231806,0,0,0.51776031175182,0,0.798049746802062,1.19513524027894,1.21553358534147,0.628839487883947,0.183843508450014,1.77797382241292,0.618105171716683,0.320919209591815,0.758091635291392,1.2673964994512,1.13175804831646,0.468207537349412,0.704276676453562,0.746661096422973,0.952587382566147,1.0429589335037,1.15745532278223,1.23625770240992,1.17759136107518,0.685738504770831,0.70990322463735,0.953744759789284,1.0174249164263,0.752875043322645,0.423073039458382,0.73171189149109,0.526139422875686,0.679020569229309,0.561142271657738,0.355905054372522,0.985044823755635,0.818462086339379,0.619747364743864,0.578719832943424,0.999242311751784,0,0,0.57386499620653,0.441182838239031,0
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,3.64169629547276,5.81890077199236,6.33831403506179,0,0,0,0,0,0,0,1.45165457231869,0.540023753326763,1.68259969081106,8.2838785477103,7.95126747425809,0.979926393719632,0.287536413054709,0,3.30347642998166,2.17068474744819,2.61131106535614,2.50583946687368,2.92760459527711,4.16730696445408,1.67509799400829,1.68828783009504,1.83357897332172,5.59794312399969,7.11858403995515,5.59198337475902,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08182392119363,1.52232739156071,0.461230994512117,0.301445281105245,0.705532242814229,0,0,0,0,0,0,0,0,0.292780797011547,0,0.255457055208591,0,0,0,3.14560342750128,0.457500602818626,1.63350657746724,1.73824320192276,1.53429274398198,1.87009240103604,2.75810147215188,0,0,0,0,0.130120442962704,0.459804208866946,0.720248519221397,0.30140963567143,0.95251098811859,0.768682321709099,0.749613796477831,2.06962696591213,0,0,0.703804496655795,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,1.68231958851302,1.13195073617213,0.660837565967596,0,0.639864751605702,0.464473343720877,1.28867461322093,0.80673409849337,0.667134131534611,1.33157938278791,0.949058123089023,0.164698954724011,0.251335208800269,0.795825888164603,0.19496408711912,0.898819408654221,0,0.597423819763102,0,0.342745537829186,0,0,0.193952487167626,0.210407459670956,0,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13694847062291,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,1.9266070798535,0.937693492737625,0,0,5.36363973007636,8.58965237452605,10.7711698866399,23.4189421993501,36.0933852013478,50.9537755419898,19.8357243820698,28.0565623594859,26.4842811224171,4.4984984299053,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0.632073515871632,0,0,8.85142974959849,0.18006109403131,0.388076051348264,0.857348140126369,4.43350584105684,2.14042581122485,1.48094118541909,0,0,0,0,0,0,0,0,0,0.291480836629851,0.741701208042039,0,0.206386867963223,0,0,0,0,0,0,0,0,1.89801596148681,1.42323626988794,1.72808545314882,1.46361807210128,1.31017538247707,0.809186078308924,1.48776220305605,0.785267825952089,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0.920650473014354,1.71868654031819,1.03111909406213,2.74033007908257,0,0.675022500231806,0,0,0.51776031175182,0,0.798049746802062,1.19513524027894,1.21553358534147,0.628839487883947,0.183843508450014,1.77797382241292,0.618105171716683,0.320919209591815,0.758091635291392,1.2673964994512,1.13175804831646,0.468207537349412,0.704276676453562,0.746661096422973,0.952587382566147,1.0429589335037,1.15745532278223,1.23625770240992,1.17759136107518,0.685738504770831,0.70990322463735,0.953744759789284,1.0174249164263,0.752875043322645,0.423073039458382,0.73171189149109,0.526139422875686,0.679020569229309,0.561142271657738,0.355905054372522,0.985044823755635,0.818462086339379,0.619747364743864,0.578719832943424,0.999242311751784,0,0,0.57386499620653,0.441182838239031,0
|short_description=p1@Alk
|short_description=p1@Alk
}}
}}

Revision as of 23:58, 14 November 2012

Short description:p1@Alk
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Alk_5end
Coexpression cluster:MCL_coexpression_mm9:107
Association with transcript: -326bp_to_NM_007439, uc008dnb.1, uc008dnc.1, uc008dnd.1_5end
EntrezGene:Alk
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Alk

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.64
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.95
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.59
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F11.63
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B22.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.95
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.59
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.77
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D723.42
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D836.09
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D950.95
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.84
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D528.06
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D626.48
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G88.85
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B94.43
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D41.73
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A91.49
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.31e-3073
nervous system1.90e-2975
ectoderm-derived structure7.51e-2295
ectoderm7.51e-2295
presumptive ectoderm7.51e-2295
regional part of nervous system7.31e-1854
neurectoderm3.56e-1564
neural plate3.56e-1564
presumptive neural plate3.56e-1564
autonomic nervous system4.49e-159
neural tube1.75e-1452
neural rod1.75e-1452
future spinal cord1.75e-1452
neural keel1.75e-1452
ecto-epithelium3.43e-1273
peripheral nervous system7.18e-1211
gray matter1.06e-1134
anterior neural tube3.45e-1140
brain6.00e-1147
future brain6.00e-1147
regional part of forebrain2.75e-1039
forebrain2.75e-1039
future forebrain2.75e-1039
regional part of brain4.57e-1046
structure with developmental contribution from neural crest1.95e-0992
pre-chordal neural plate4.36e-0949
organ system subdivision1.18e-08194
regional part of spinal cord1.51e-085
gray matter of spinal cord1.51e-085
basal ganglion6.51e-088
nuclear complex of neuraxis6.51e-088
aggregate regional part of brain6.51e-088
collection of basal ganglia6.51e-088
cerebral subcortex6.51e-088
spinal cord5.36e-076
dorsal region element5.36e-076
dorsum5.36e-076
brain grey matter7.05e-0729
regional part of telencephalon7.05e-0729
telencephalon7.05e-0729







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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