FFCP PHASE1:Mm9::chr15:82123103..82123106,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=22|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:82123103..82123106,+|id=chr15:82123103..82123106,+|ontology_enrichment_celltype=CL:0002319!2.10e-25!43;CL:0000221!1.84e-24!44;CL:0000133!1.84e-24!44;CL:0000540!4.40e-24!33;CL:0000047!4.40e-24!33;CL:0000031!4.40e-24!33;CL:0000404!4.40e-24!33;CL:0000117!1.13e-22!23;CL:0000337!1.13e-22!23;CL:0000055!1.24e-19!50;CL:0000393!2.53e-18!39;CL:0000211!2.53e-18!39;CL:0002321!6.32e-10!70;CL:0000220!6.32e-10!70;CL:0002609!6.25e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,6.62e-53,23;CL:0000337,6.62e-53,23;CL:0000540,3.95e-38,33;CL:0000047,3.95e-38,33;CL:0000031,3.95e-38,33;CL:0000404,3.95e-38,33;CL:0002319,2.14e-35,43;CL:0000221,1.92e-34,44;CL:0000133,1.92e-34,44;CL:0000393,2.44e-31,39;CL:0000211,2.44e-31,39;CL:0002321,3.15e-19,70;CL:0002609,1.43e-14,6;CL:0000723,3.50e-12,91;CL:0000048,3.50e-12,91;CL:0000034,4.81e-11,97;CL:0002612,1.89e-08,3;CL:0000120,3.28e-08,3;CL:0002614,3.65e-08,3;CL:0002613,4.30e-08,3;CL:0002610,6.26e-08,3;CL:0002608,6.61e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.30e-40!75;UBERON:0001016!5.30e-40!75;UBERON:0001017!5.08e-39!73;UBERON:0005743!5.08e-39!73;UBERON:0004121!2.00e-33!102;UBERON:0000924!2.00e-33!102;UBERON:0006601!2.00e-33!102;UBERON:0002346!1.28e-28!71;UBERON:0003075!1.28e-28!71;UBERON:0007284!1.28e-28!71;UBERON:0001049!1.46e-27!52;UBERON:0005068!1.46e-27!52;UBERON:0006241!1.46e-27!52;UBERON:0007135!1.46e-27!52;UBERON:0000955!7.01e-26!50;UBERON:0006238!7.01e-26!50;UBERON:0002616!3.02e-25!49;UBERON:0000033!1.49e-24!63;UBERON:0002020!4.01e-23!34;UBERON:0003056!4.25e-21!49;UBERON:0003080!1.50e-19!40;UBERON:0002780!7.12e-19!39;UBERON:0001890!7.12e-19!39;UBERON:0006240!7.12e-19!39;UBERON:0002791!2.27e-18!29;UBERON:0003528!2.27e-18!29;UBERON:0001893!2.27e-18!29;UBERON:0007811!1.15e-13!86;UBERON:0000956!7.76e-12!21;UBERON:0001869!7.76e-12!21;UBERON:0000203!7.76e-12!21;UBERON:0000153!1.15e-11!94;UBERON:0002619!1.23e-08!17;UBERON:0003076!1.60e-08!12;UBERON:0003057!1.60e-08!12;UBERON:0002420!5.91e-08!8;UBERON:0007245!5.91e-08!8;UBERON:0010009!5.91e-08!8;UBERON:0010011!5.91e-08!8;UBERON:0000454!5.91e-08!8|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.30e-41,73;UBERON:0000073,1.56e-40,54;UBERON:0001016,2.66e-40,75;UBERON:0002020,3.39e-35,34;UBERON:0001049,6.72e-34,52;UBERON:0005068,6.72e-34,52;UBERON:0006241,6.72e-34,52;UBERON:0007135,6.72e-34,52;UBERON:0004121,3.35e-30,95;UBERON:0000924,3.35e-30,95;UBERON:0006601,3.35e-30,95;UBERON:0002346,3.42e-28,64;UBERON:0003075,3.42e-28,64;UBERON:0007284,3.42e-28,64;UBERON:0002616,2.17e-25,46;UBERON:0003528,5.66e-25,29;UBERON:0002791,5.66e-25,29;UBERON:0001893,5.66e-25,29;UBERON:0000955,1.01e-24,47;UBERON:0006238,1.01e-24,47;UBERON:0010371,7.55e-24,73;UBERON:0002780,1.75e-21,39;UBERON:0001890,1.75e-21,39;UBERON:0006240,1.75e-21,39;UBERON:0003080,8.12e-21,40;UBERON:0010314,1.82e-17,92;UBERON:0003056,4.68e-16,49;UBERON:0000956,1.29e-15,21;UBERON:0001869,1.29e-15,21;UBERON:0000203,1.29e-15,21;UBERON:0003076,4.22e-14,12;UBERON:0003057,4.22e-14,12;UBERON:0001948,1.44e-12,5;UBERON:0002315,1.44e-12,5;UBERON:0000025,1.03e-11,114;UBERON:0002619,3.99e-11,17;UBERON:0002420,8.84e-11,8;UBERON:0007245,8.84e-11,8;UBERON:0010009,8.84e-11,8;UBERON:0010011,8.84e-11,8;UBERON:0000454,8.84e-11,8;UBERON:0011216,9.31e-11,194;UBERON:0004111,1.70e-10,122;UBERON:0002240,2.13e-10,6;UBERON:0005174,2.13e-10,6;UBERON:0001137,2.13e-10,6;UBERON:0002257,1.89e-08,3;UBERON:0002038,3.65e-08,3;UBERON:0009663,3.65e-08,3;UBERON:0009661,3.65e-08,3;UBERON:0000125,3.65e-08,3;UBERON:0002308,3.65e-08,3;UBERON:0004684,6.26e-08,3;UBERON:0002275,6.26e-08,3;UBERON:0002021,5.06e-07,10;UBERON:0000411,5.06e-07,10;UBERON:0001950,5.06e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0,0.972149495371417,0.699932108126813,0,0,0,0,0,0,0,3.03474691289397,7.93486468908049,9.50747105259269,0,0,0,0,0,1.49800055259202,1.53687322128622,4.56234294157302,11.2054928815303,6.52007380189284,4.28476476605705,5.96345060569357,2.69479758272899,5.17565543498476,8.27296907949019,4.40463523997555,3.31987079021488,8.90917892886212,4.48413378282659,6.77008562657831,6.77187381723788,5.862842979029,8.4414391504752,5.95913166329559,10.0173719061047,6.97621235915604,6.15118171223492,0.227178579999552,0.302286240427142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0,0.60289056221049,0,0,0.247194967734374,0,0,0,0,0.484875253135222,0,1.75668478206928,2.09446706813455,0,0,0,0,0.898743836428936,0.457500602818626,0.879580464790051,0.869121600961382,1.02286182932132,1.45451631191692,1.78465389374533,0,0,0,0,0.130120442962704,0,0.360124259610698,0.753524089178575,0.204109497453984,0.640568601424249,0.374806898238915,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0,0,0.841159794256509,1.9551876352064,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0.963303539926752,1.05490517932983,0,0,1.26203287766503,0.390438744296638,0.646270193198397,0.238968797952552,0,0.283076530788832,0.404810701674894,0.876767573733936,0.395287777946524,0.642642632843614,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0.517434735131018,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0,0.844780627453891,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0,2.57779773515531,1.37016503954128,1.5107877947794,0,0.900642406448441,1.81256963593682,1.55328093525546,0.726511433089237,0,0.170733605754134,0.486213434136588,0.209613162627982,0.367687016900028,0,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0.476293691283074,0.115884325944855,0.192909220463705,0,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0,0,0,0,0.263069711437843,0.135804113845862,0,0,0,0.818462086339379,0.464810523557898,0,0,0,0.429742108096597,0.191288332068843,0,0|short_description=p@chr15:82123103..82123106,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:82123103..82123106,+ | |||
|id=chr15:82123103..82123106,+ | |||
|ontology_enrichment_celltype=CL:0002319!2.10e-25!43;CL:0000221!1.84e-24!44;CL:0000133!1.84e-24!44;CL:0000540!4.40e-24!33;CL:0000047!4.40e-24!33;CL:0000031!4.40e-24!33;CL:0000404!4.40e-24!33;CL:0000117!1.13e-22!23;CL:0000337!1.13e-22!23;CL:0000055!1.24e-19!50;CL:0000393!2.53e-18!39;CL:0000211!2.53e-18!39;CL:0002321!6.32e-10!70;CL:0000220!6.32e-10!70;CL:0002609!6.25e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.62e-53,23;CL:0000337,6.62e-53,23;CL:0000540,3.95e-38,33;CL:0000047,3.95e-38,33;CL:0000031,3.95e-38,33;CL:0000404,3.95e-38,33;CL:0002319,2.14e-35,43;CL:0000221,1.92e-34,44;CL:0000133,1.92e-34,44;CL:0000393,2.44e-31,39;CL:0000211,2.44e-31,39;CL:0002321,3.15e-19,70;CL:0002609,1.43e-14,6;CL:0000723,3.50e-12,91;CL:0000048,3.50e-12,91;CL:0000034,4.81e-11,97;CL:0002612,1.89e-08,3;CL:0000120,3.28e-08,3;CL:0002614,3.65e-08,3;CL:0002613,4.30e-08,3;CL:0002610,6.26e-08,3;CL:0002608,6.61e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.30e-40!75;UBERON:0001016!5.30e-40!75;UBERON:0001017!5.08e-39!73;UBERON:0005743!5.08e-39!73;UBERON:0004121!2.00e-33!102;UBERON:0000924!2.00e-33!102;UBERON:0006601!2.00e-33!102;UBERON:0002346!1.28e-28!71;UBERON:0003075!1.28e-28!71;UBERON:0007284!1.28e-28!71;UBERON:0001049!1.46e-27!52;UBERON:0005068!1.46e-27!52;UBERON:0006241!1.46e-27!52;UBERON:0007135!1.46e-27!52;UBERON:0000955!7.01e-26!50;UBERON:0006238!7.01e-26!50;UBERON:0002616!3.02e-25!49;UBERON:0000033!1.49e-24!63;UBERON:0002020!4.01e-23!34;UBERON:0003056!4.25e-21!49;UBERON:0003080!1.50e-19!40;UBERON:0002780!7.12e-19!39;UBERON:0001890!7.12e-19!39;UBERON:0006240!7.12e-19!39;UBERON:0002791!2.27e-18!29;UBERON:0003528!2.27e-18!29;UBERON:0001893!2.27e-18!29;UBERON:0007811!1.15e-13!86;UBERON:0000956!7.76e-12!21;UBERON:0001869!7.76e-12!21;UBERON:0000203!7.76e-12!21;UBERON:0000153!1.15e-11!94;UBERON:0002619!1.23e-08!17;UBERON:0003076!1.60e-08!12;UBERON:0003057!1.60e-08!12;UBERON:0002420!5.91e-08!8;UBERON:0007245!5.91e-08!8;UBERON:0010009!5.91e-08!8;UBERON:0010011!5.91e-08!8;UBERON:0000454!5.91e-08!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.30e-41,73;UBERON:0000073,1.56e-40,54;UBERON:0001016,2.66e-40,75;UBERON:0002020,3.39e-35,34;UBERON:0001049,6.72e-34,52;UBERON:0005068,6.72e-34,52;UBERON:0006241,6.72e-34,52;UBERON:0007135,6.72e-34,52;UBERON:0004121,3.35e-30,95;UBERON:0000924,3.35e-30,95;UBERON:0006601,3.35e-30,95;UBERON:0002346,3.42e-28,64;UBERON:0003075,3.42e-28,64;UBERON:0007284,3.42e-28,64;UBERON:0002616,2.17e-25,46;UBERON:0003528,5.66e-25,29;UBERON:0002791,5.66e-25,29;UBERON:0001893,5.66e-25,29;UBERON:0000955,1.01e-24,47;UBERON:0006238,1.01e-24,47;UBERON:0010371,7.55e-24,73;UBERON:0002780,1.75e-21,39;UBERON:0001890,1.75e-21,39;UBERON:0006240,1.75e-21,39;UBERON:0003080,8.12e-21,40;UBERON:0010314,1.82e-17,92;UBERON:0003056,4.68e-16,49;UBERON:0000956,1.29e-15,21;UBERON:0001869,1.29e-15,21;UBERON:0000203,1.29e-15,21;UBERON:0003076,4.22e-14,12;UBERON:0003057,4.22e-14,12;UBERON:0001948,1.44e-12,5;UBERON:0002315,1.44e-12,5;UBERON:0000025,1.03e-11,114;UBERON:0002619,3.99e-11,17;UBERON:0002420,8.84e-11,8;UBERON:0007245,8.84e-11,8;UBERON:0010009,8.84e-11,8;UBERON:0010011,8.84e-11,8;UBERON:0000454,8.84e-11,8;UBERON:0011216,9.31e-11,194;UBERON:0004111,1.70e-10,122;UBERON:0002240,2.13e-10,6;UBERON:0005174,2.13e-10,6;UBERON:0001137,2.13e-10,6;UBERON:0002257,1.89e-08,3;UBERON:0002038,3.65e-08,3;UBERON:0009663,3.65e-08,3;UBERON:0009661,3.65e-08,3;UBERON:0000125,3.65e-08,3;UBERON:0002308,3.65e-08,3;UBERON:0004684,6.26e-08,3;UBERON:0002275,6.26e-08,3;UBERON:0002021,5.06e-07,10;UBERON:0000411,5.06e-07,10;UBERON:0001950,5.06e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0,0.972149495371417,0.699932108126813,0,0,0,0,0,0,0,3.03474691289397,7.93486468908049,9.50747105259269,0,0,0,0,0,1.49800055259202,1.53687322128622,4.56234294157302,11.2054928815303,6.52007380189284,4.28476476605705,5.96345060569357,2.69479758272899,5.17565543498476,8.27296907949019,4.40463523997555,3.31987079021488,8.90917892886212,4.48413378282659,6.77008562657831,6.77187381723788,5.862842979029,8.4414391504752,5.95913166329559,10.0173719061047,6.97621235915604,6.15118171223492,0.227178579999552,0.302286240427142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0,0.60289056221049,0,0,0.247194967734374,0,0,0,0,0.484875253135222,0,1.75668478206928,2.09446706813455,0,0,0,0,0.898743836428936,0.457500602818626,0.879580464790051,0.869121600961382,1.02286182932132,1.45451631191692,1.78465389374533,0,0,0,0,0.130120442962704,0,0.360124259610698,0.753524089178575,0.204109497453984,0.640568601424249,0.374806898238915,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0,0,0.841159794256509,1.9551876352064,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0.963303539926752,1.05490517932983,0,0,1.26203287766503,0.390438744296638,0.646270193198397,0.238968797952552,0,0.283076530788832,0.404810701674894,0.876767573733936,0.395287777946524,0.642642632843614,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0.517434735131018,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0,0.844780627453891,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0,2.57779773515531,1.37016503954128,1.5107877947794,0,0.900642406448441,1.81256963593682,1.55328093525546,0.726511433089237,0,0.170733605754134,0.486213434136588,0.209613162627982,0.367687016900028,0,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0.476293691283074,0.115884325944855,0.192909220463705,0,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0,0,0,0,0.263069711437843,0.135804113845862,0,0,0,0.818462086339379,0.464810523557898,0,0,0,0.429742108096597,0.191288332068843,0,0 | |||
|short_description=p@chr15:82123103..82123106,+ | |||
}} |
Revision as of 11:20, 13 September 2013
Short description: | p@chr15:82123103..82123106, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:82123103..82123106, + |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.62e-53 | 23 |
neuroblast (sensu Vertebrata) | 6.62e-53 | 23 |
neuron | 3.95e-38 | 33 |
neuronal stem cell | 3.95e-38 | 33 |
neuroblast | 3.95e-38 | 33 |
electrically signaling cell | 3.95e-38 | 33 |
neural cell | 2.14e-35 | 43 |
ectodermal cell | 1.92e-34 | 44 |
neurectodermal cell | 1.92e-34 | 44 |
electrically responsive cell | 2.44e-31 | 39 |
electrically active cell | 2.44e-31 | 39 |
embryonic cell | 3.15e-19 | 70 |
neuron of cerebral cortex | 1.43e-14 | 6 |
somatic stem cell | 3.50e-12 | 91 |
multi fate stem cell | 3.50e-12 | 91 |
stem cell | 4.81e-11 | 97 |
neuron of the ventral spinal cord | 1.89e-08 | 3 |
granule cell | 3.28e-08 | 3 |
neuron of the substantia nigra | 3.65e-08 | 3 |
striatum neuron | 4.30e-08 | 3 |
raphe nuclei neuron | 6.26e-08 | 3 |
hippocampal neuron | 6.61e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.