FFCP PHASE1:Mm9::chr5:81450235..81450266,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=319387|HGNC=|MCL_coexpression_id=2430|UniProt=D3Z6J2|association_with_transcript=0bp_to_ENSMUST00000120128_5end|description=CAGE_peak_6_at_Lphn3_5end|id=chr5:81450235..81450266,+|ontology_enrichment_celltype=CL:0000540!6.86e-12!33;CL:0000047!6.86e-12!33;CL:0000031!6.86e-12!33;CL:0000404!6.86e-12!33;CL:0000117!5.67e-11!23;CL:0000337!5.67e-11!23;CL:0000221!7.10e-10!44;CL:0000133!7.10e-10!44;CL:0002319!1.67e-09!43;CL:0000393!8.09e-09!39;CL:0000211!8.09e-09!39;CL:0000055!7.32e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.63e-15,23;CL:0000337,1.63e-15,23;CL:0000540,1.70e-13,33;CL:0000047,1.70e-13,33;CL:0000031,1.70e-13,33;CL:0000404,1.70e-13,33;CL:0000221,1.32e-12,44;CL:0000133,1.32e-12,44;CL:0002319,5.10e-12,43;CL:0000393,2.77e-10,39;CL:0000211,2.77e-10,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!8.46e-22!102;UBERON:0000924!8.46e-22!102;UBERON:0006601!8.46e-22!102;UBERON:0000073!9.91e-21!75;UBERON:0001016!9.91e-21!75;UBERON:0001017!2.06e-19!73;UBERON:0005743!2.06e-19!73;UBERON:0000033!5.61e-18!63;UBERON:0002346!7.28e-18!71;UBERON:0003075!7.28e-18!71;UBERON:0007284!7.28e-18!71;UBERON:0003056!4.59e-16!49;UBERON:0001049!5.93e-16!52;UBERON:0005068!5.93e-16!52;UBERON:0006241!5.93e-16!52;UBERON:0007135!5.93e-16!52;UBERON:0000955!6.36e-15!50;UBERON:0006238!6.36e-15!50;UBERON:0002616!2.27e-14!49;UBERON:0002020!2.62e-14!34;UBERON:0003080!3.82e-13!40;UBERON:0002780!1.13e-12!39;UBERON:0001890!1.13e-12!39;UBERON:0006240!1.13e-12!39;UBERON:0002791!1.76e-11!29;UBERON:0003528!1.76e-11!29;UBERON:0001893!1.76e-11!29;UBERON:0000153!4.67e-09!94;UBERON:0007811!8.20e-08!86;UBERON:0000468!1.65e-07!333;UBERON:0000956!2.74e-07!21;UBERON:0001869!2.74e-07!21;UBERON:0000203!2.74e-07!21;UBERON:0002619!3.42e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.43e-25,75;UBERON:0004121,4.59e-24,95;UBERON:0000924,4.59e-24,95;UBERON:0006601,4.59e-24,95;UBERON:0000073,3.35e-23,54;UBERON:0001017,4.39e-23,73;UBERON:0002346,1.62e-21,64;UBERON:0003075,1.62e-21,64;UBERON:0007284,1.62e-21,64;UBERON:0001049,1.71e-20,52;UBERON:0005068,1.71e-20,52;UBERON:0006241,1.71e-20,52;UBERON:0007135,1.71e-20,52;UBERON:0010371,1.57e-19,73;UBERON:0003056,5.78e-19,49;UBERON:0002020,7.07e-19,34;UBERON:0000955,1.46e-17,47;UBERON:0006238,1.46e-17,47;UBERON:0002616,1.04e-16,46;UBERON:0003080,2.06e-16,40;UBERON:0002780,1.15e-15,39;UBERON:0001890,1.15e-15,39;UBERON:0006240,1.15e-15,39;UBERON:0003528,2.55e-14,29;UBERON:0002791,2.55e-14,29;UBERON:0001893,2.55e-14,29;UBERON:0010314,2.94e-14,92;UBERON:0000025,4.45e-09,114;UBERON:0002619,6.07e-09,17;UBERON:0004111,6.40e-09,122;UBERON:0002420,9.40e-09,8;UBERON:0007245,9.40e-09,8;UBERON:0010009,9.40e-09,8;UBERON:0010011,9.40e-09,8;UBERON:0000454,9.40e-09,8;UBERON:0000956,8.99e-08,21;UBERON:0001869,8.99e-08,21;UBERON:0000203,8.99e-08,21;UBERON:0011216,1.98e-07,194|phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0.548457734422955,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0.125896817975577,0.202753862439029,0,0,0,0,1.36100929351998,0.419959264876088,0,0,0,0,0,0.286533439938757,0,1.61853168687678,2.64495489636016,2.53532561402472,0,0,0,0,0,0,0.384218305321555,0.518448061542388,0.405017814995072,0.420649922702764,2.85650984403804,1.76694832761291,1.22490799214954,3.1629005436018,1.83843757322004,1.10115880999389,2.29837208553338,1.22885226604995,1.58263545276233,6.49562269577109,2.6045668527838,1.11673199600552,4.50210088025344,3.81995619442025,3.24091444021034,2.42031857358475,1.86399445825301,2.80186915332781,3.02286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,1.40843419776681,0,0,0,0.216491041011214,0.760079596425296,0.505524445014783,0.22836775943812,0.776813650941515,0,0.520455980298408,0,0.922461989024234,0.301445281105245,0.823120949949934,0.125666591329675,0,0,0,0.485300549842228,0,0,0,1.75668478206928,2.93225389538837,0,0,0,0,1.79748767285787,1.37250180845588,2.76439574648302,2.08589184230732,3.83573185995496,1.24672826735736,2.10913641988085,0.509196819251581,0,0.252722758433675,0.420883711772948,1.56144531555244,0.689706313300419,0.720248519221397,2.10986744970001,2.17716797284249,1.7935920839879,1.03071897015702,2.06962696591213,0.215567992932842,1.13463648100692,0.879755620819744,0.43839146485515,2.78047249225598,0.348252166522167,1.02891068203972,2.9855140022774,0,0,0,0.207125772535502,1.40715635988658,0.540186184383045,0,0.196764231747404,1.23413690309903,0.232533944750408,0.268273401399619,0.116765342367169,0.493679549740441,0.32833492815819,0,0.146199987425332,0.658650345873152,0.134206418760372,1.89260953707715,1.44066457330998,0,0.528901133327089,0.853153002140936,1.39342003116263,0.515469845288373,0.201683524623343,0,0,0,0,1.50801125280162,0.795825888164603,0.19496408711912,0,0.216138049874694,0.597423819763102,0,0.799739588268102,0,1.01825663922657,0.581857461502877,0.631222379012867,0.316182685621286,0.442830443938806,0,0.1233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| ||
|EntrezGene=319387 | |||
|HGNC= | |||
|MCL_coexpression_id=2430 | |||
|UniProt=D3Z6J2 | |||
|association_with_transcript=0bp_to_ENSMUST00000120128_5end | |||
|description=CAGE_peak_6_at_Lphn3_5end | |||
|id=chr5:81450235..81450266,+ | |||
|ontology_enrichment_celltype=CL:0000540!6.86e-12!33;CL:0000047!6.86e-12!33;CL:0000031!6.86e-12!33;CL:0000404!6.86e-12!33;CL:0000117!5.67e-11!23;CL:0000337!5.67e-11!23;CL:0000221!7.10e-10!44;CL:0000133!7.10e-10!44;CL:0002319!1.67e-09!43;CL:0000393!8.09e-09!39;CL:0000211!8.09e-09!39;CL:0000055!7.32e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.63e-15,23;CL:0000337,1.63e-15,23;CL:0000540,1.70e-13,33;CL:0000047,1.70e-13,33;CL:0000031,1.70e-13,33;CL:0000404,1.70e-13,33;CL:0000221,1.32e-12,44;CL:0000133,1.32e-12,44;CL:0002319,5.10e-12,43;CL:0000393,2.77e-10,39;CL:0000211,2.77e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.43e-25,75;UBERON:0004121,4.59e-24,95;UBERON:0000924,4.59e-24,95;UBERON:0006601,4.59e-24,95;UBERON:0000073,3.35e-23,54;UBERON:0001017,4.39e-23,73;UBERON:0002346,1.62e-21,64;UBERON:0003075,1.62e-21,64;UBERON:0007284,1.62e-21,64;UBERON:0001049,1.71e-20,52;UBERON:0005068,1.71e-20,52;UBERON:0006241,1.71e-20,52;UBERON:0007135,1.71e-20,52;UBERON:0010371,1.57e-19,73;UBERON:0003056,5.78e-19,49;UBERON:0002020,7.07e-19,34;UBERON:0000955,1.46e-17,47;UBERON:0006238,1.46e-17,47;UBERON:0002616,1.04e-16,46;UBERON:0003080,2.06e-16,40;UBERON:0002780,1.15e-15,39;UBERON:0001890,1.15e-15,39;UBERON:0006240,1.15e-15,39;UBERON:0003528,2.55e-14,29;UBERON:0002791,2.55e-14,29;UBERON:0001893,2.55e-14,29;UBERON:0010314,2.94e-14,92;UBERON:0000025,4.45e-09,114;UBERON:0002619,6.07e-09,17;UBERON:0004111,6.40e-09,122;UBERON:0002420,9.40e-09,8;UBERON:0007245,9.40e-09,8;UBERON:0010009,9.40e-09,8;UBERON:0010011,9.40e-09,8;UBERON:0000454,9.40e-09,8;UBERON:0000956,8.99e-08,21;UBERON:0001869,8.99e-08,21;UBERON:0000203,8.99e-08,21;UBERON:0011216,1.98e-07,194 | |||
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|short_description=p6@Lphn3 | |||
}} |
Revision as of 08:05, 14 September 2013
Short description: | p6@Lphn3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Lphn3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2430 |
Association with transcript: | 0bp_to_ENSMUST00000120128_5end |
EntrezGene: | Lphn3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.63e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.63e-15 | 23 |
neuron | 1.70e-13 | 33 |
neuronal stem cell | 1.70e-13 | 33 |
neuroblast | 1.70e-13 | 33 |
electrically signaling cell | 1.70e-13 | 33 |
ectodermal cell | 1.32e-12 | 44 |
neurectodermal cell | 1.32e-12 | 44 |
neural cell | 5.10e-12 | 43 |
electrically responsive cell | 2.77e-10 | 39 |
electrically active cell | 2.77e-10 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.