FFCP PHASE1:Mm9::chr2:102499000..102499009,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=20511|HGNC=|MCL_coexpression_id=1|UniProt=P43006,Q3UYK6|association_with_transcript=160bp_to_NM_001077514,uc008lid.2_5end|description=CAGE_peak_8_at_Slc1a2_5end|id=chr2:102499000..102499009,+|ontology_enrichment_celltype=CL:0000117!3.87e-15!23;CL:0000337!3.87e-15!23;CL:0002319!2.33e-14!43;CL:0000221!2.45e-14!44;CL:0000133!2.45e-14!44;CL:0000540!2.55e-14!33;CL:0000047!2.55e-14!33;CL:0000031!2.55e-14!33;CL:0000404!2.55e-14!33;CL:0000055!6.26e-11!50;CL:0000393!7.18e-11!39;CL:0000211!7.18e-11!39|ontology_enrichment_celltype_v019_2=CL:0000117,4.63e-20,23;CL:0000337,4.63e-20,23;CL:0002319,1.46e-15,43;CL:0000221,5.08e-15,44;CL:0000133,5.08e-15,44;CL:0000540,1.07e-14,33;CL:0000047,1.07e-14,33;CL:0000031,1.07e-14,33;CL:0000404,1.07e-14,33;CL:0000393,2.12e-11,39;CL:0000211,2.12e-11,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.05e-34!73;UBERON:0005743!1.05e-34!73;UBERON:0000073!5.50e-33!75;UBERON:0001016!5.50e-33!75;UBERON:0000033!5.56e-29!63;UBERON:0001049!1.93e-28!52;UBERON:0005068!1.93e-28!52;UBERON:0006241!1.93e-28!52;UBERON:0007135!1.93e-28!52;UBERON:0002346!4.20e-27!71;UBERON:0003075!4.20e-27!71;UBERON:0007284!4.20e-27!71;UBERON:0000955!4.79e-27!50;UBERON:0006238!4.79e-27!50;UBERON:0002616!2.77e-26!49;UBERON:0004121!2.47e-25!102;UBERON:0000924!2.47e-25!102;UBERON:0006601!2.47e-25!102;UBERON:0002020!9.74e-25!34;UBERON:0003056!1.67e-24!49;UBERON:0003080!1.74e-21!40;UBERON:0002791!4.36e-21!29;UBERON:0003528!4.36e-21!29;UBERON:0001893!4.36e-21!29;UBERON:0002780!1.00e-20!39;UBERON:0001890!1.00e-20!39;UBERON:0006240!1.00e-20!39;UBERON:0000956!9.59e-16!21;UBERON:0001869!9.59e-16!21;UBERON:0000203!9.59e-16!21;UBERON:0007811!2.31e-15!86;UBERON:0000153!4.19e-14!94;UBERON:0002619!5.41e-14!17;UBERON:0002021!5.76e-10!10;UBERON:0000411!5.76e-10!10;UBERON:0001950!5.76e-10!10;UBERON:0003076!2.20e-07!12;UBERON:0003057!2.20e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.06e-41,73;UBERON:0001016,1.35e-39,75;UBERON:0000073,2.08e-38,54;UBERON:0002346,7.23e-36,64;UBERON:0003075,7.23e-36,64;UBERON:0007284,7.23e-36,64;UBERON:0001049,8.21e-36,52;UBERON:0005068,8.21e-36,52;UBERON:0006241,8.21e-36,52;UBERON:0007135,8.21e-36,52;UBERON:0002020,2.75e-35,34;UBERON:0004121,1.60e-34,95;UBERON:0000924,1.60e-34,95;UBERON:0006601,1.60e-34,95;UBERON:0010371,4.18e-31,73;UBERON:0000955,6.95e-30,47;UBERON:0006238,6.95e-30,47;UBERON:0003528,2.04e-29,29;UBERON:0002791,2.04e-29,29;UBERON:0001893,2.04e-29,29;UBERON:0002616,9.43e-29,46;UBERON:0003056,1.09e-26,49;UBERON:0003080,4.49e-26,40;UBERON:0002780,6.44e-25,39;UBERON:0001890,6.44e-25,39;UBERON:0006240,6.44e-25,39;UBERON:0010314,1.09e-21,92;UBERON:0002619,1.10e-21,17;UBERON:0000956,8.14e-21,21;UBERON:0001869,8.14e-21,21;UBERON:0000203,8.14e-21,21;UBERON:0002021,3.67e-15,10;UBERON:0000411,3.67e-15,10;UBERON:0001950,3.67e-15,10;UBERON:0003076,7.80e-10,12;UBERON:0003057,7.80e-10,12;UBERON:0002420,1.41e-09,8;UBERON:0007245,1.41e-09,8;UBERON:0010009,1.41e-09,8;UBERON:0010011,1.41e-09,8;UBERON:0000454,1.41e-09,8;UBERON:0000025,1.55e-09,114;UBERON:0004111,8.93e-09,122;UBERON:0002240,4.33e-08,6;UBERON:0005174,4.33e-08,6;UBERON:0001137,4.33e-08,6;UBERON:0001954,4.66e-08,7;UBERON:0003022,4.66e-08,7;UBERON:0002421,4.66e-08,7;UBERON:0000349,4.66e-08,7;UBERON:0002600,4.66e-08,7;UBERON:0001948,7.15e-07,5;UBERON:0002315,7.15e-07,5|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48677489619386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.872100625521786,4.17403747195497,4.6663175777828,1.1198913730029,0,0,0,0,0,0,0,5.46254444320914,7.40587370980846,4.43681982454325,1.35537812827653,0,0,0,0,2.09720077362883,2.30530983192933,1.55534418462716,0.945041568321835,0.841299845405528,9.14083150092171,7.73039893330647,2.9397791811589,2.30029130443767,1.83843757322004,13.2139057199266,19.9192247412893,20.4296689230804,6.3305418110493,4.02545631850602,3.12548022334056,8.93385596804419,9.56696437053856,15.7382195210114,11.490514833473,13.0981946335175,10.4383689662168,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0.14084341977668,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9772735491963,6.49284791121711,0,0,0,0,14.0803201040533,16.4700217014706,3.64397621127307,22.5971616249959,24.5486839037117,15.3763152974074,17.8465389374533,0,0.124406970610093,0,1.89397670297827,0.130120442962704,0.229902104433473,1.0803727788321,1.20563854268572,0.544291993210623,0.768682321709099,1.59292931751539,3.62184719034622,0,0,0.703804496655795,0.657587197282725,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0.36012412292203,0,0,0,0,0,0,0,0,0,0,0,0,27.5479832619007,8.33527360272204,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0,0.502518772325447,0.476087281772027,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,16.3761601787548,14.8858841972098,0,0,0.94652465824877,0.390438744296638,2.15423397732799,0.238968797952552,0.668396022247182,0,0,0,0.790575555893047,9.63963949265421,0,0.178065603667255,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.214337035031592,1.06404140185364,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,18.913380805072,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0.218362563746178,0.269728692769641,0,0.26175594198403,0,0,0,0,0.165458490457098,0.194451188344048,0.645799117388655,0.337912250981556,0.352071715937262,0,0.104859344425711,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,32.7556068717899,29.4608151364593,29.7905666988486,29.730600545458,29.4585483501376,32.4819375877571,22.2757425076496,29.2708782095743,25.8291173120997,25.3702552758392,0.31136204275253,1.19707462020309,1.53660245178721,0.729320151204882,1.88651846365184,1.10306105070008,0.888986911206461,1.03017528619447,1.92551525755089,1.26348605881899,0.25347929989024,0.377252682772152,1.21733959710847,0.704276676453562,0.516919220600519,1.42888107384922,0.695305955669133,1.35036454324594,0,1.17759136107518,0.685738504770831,0.532427418478012,0.715308569841963,0.290692833264657,0.658765662907314,0.676916863133412,0.914639864363863,0.526139422875686,0.950628796921032,2.24456908663095,0.355905054372522,0.788035859004508,0.409231043169689,0.464810523557898,1.35034627686799,2.74791635731741,0.935726433781634,1.93383948643468,0.382576664137687,0.441182838239031,0.231867835620421|short_description=p8@Slc1a2}} | ||
|EntrezGene=20511 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=P43006,Q3UYK6 | |||
|association_with_transcript=160bp_to_NM_001077514,uc008lid.2_5end | |||
|description=CAGE_peak_8_at_Slc1a2_5end | |||
|id=chr2:102499000..102499009,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.87e-15!23;CL:0000337!3.87e-15!23;CL:0002319!2.33e-14!43;CL:0000221!2.45e-14!44;CL:0000133!2.45e-14!44;CL:0000540!2.55e-14!33;CL:0000047!2.55e-14!33;CL:0000031!2.55e-14!33;CL:0000404!2.55e-14!33;CL:0000055!6.26e-11!50;CL:0000393!7.18e-11!39;CL:0000211!7.18e-11!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.63e-20,23;CL:0000337,4.63e-20,23;CL:0002319,1.46e-15,43;CL:0000221,5.08e-15,44;CL:0000133,5.08e-15,44;CL:0000540,1.07e-14,33;CL:0000047,1.07e-14,33;CL:0000031,1.07e-14,33;CL:0000404,1.07e-14,33;CL:0000393,2.12e-11,39;CL:0000211,2.12e-11,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.05e-34!73;UBERON:0005743!1.05e-34!73;UBERON:0000073!5.50e-33!75;UBERON:0001016!5.50e-33!75;UBERON:0000033!5.56e-29!63;UBERON:0001049!1.93e-28!52;UBERON:0005068!1.93e-28!52;UBERON:0006241!1.93e-28!52;UBERON:0007135!1.93e-28!52;UBERON:0002346!4.20e-27!71;UBERON:0003075!4.20e-27!71;UBERON:0007284!4.20e-27!71;UBERON:0000955!4.79e-27!50;UBERON:0006238!4.79e-27!50;UBERON:0002616!2.77e-26!49;UBERON:0004121!2.47e-25!102;UBERON:0000924!2.47e-25!102;UBERON:0006601!2.47e-25!102;UBERON:0002020!9.74e-25!34;UBERON:0003056!1.67e-24!49;UBERON:0003080!1.74e-21!40;UBERON:0002791!4.36e-21!29;UBERON:0003528!4.36e-21!29;UBERON:0001893!4.36e-21!29;UBERON:0002780!1.00e-20!39;UBERON:0001890!1.00e-20!39;UBERON:0006240!1.00e-20!39;UBERON:0000956!9.59e-16!21;UBERON:0001869!9.59e-16!21;UBERON:0000203!9.59e-16!21;UBERON:0007811!2.31e-15!86;UBERON:0000153!4.19e-14!94;UBERON:0002619!5.41e-14!17;UBERON:0002021!5.76e-10!10;UBERON:0000411!5.76e-10!10;UBERON:0001950!5.76e-10!10;UBERON:0003076!2.20e-07!12;UBERON:0003057!2.20e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.06e-41,73;UBERON:0001016,1.35e-39,75;UBERON:0000073,2.08e-38,54;UBERON:0002346,7.23e-36,64;UBERON:0003075,7.23e-36,64;UBERON:0007284,7.23e-36,64;UBERON:0001049,8.21e-36,52;UBERON:0005068,8.21e-36,52;UBERON:0006241,8.21e-36,52;UBERON:0007135,8.21e-36,52;UBERON:0002020,2.75e-35,34;UBERON:0004121,1.60e-34,95;UBERON:0000924,1.60e-34,95;UBERON:0006601,1.60e-34,95;UBERON:0010371,4.18e-31,73;UBERON:0000955,6.95e-30,47;UBERON:0006238,6.95e-30,47;UBERON:0003528,2.04e-29,29;UBERON:0002791,2.04e-29,29;UBERON:0001893,2.04e-29,29;UBERON:0002616,9.43e-29,46;UBERON:0003056,1.09e-26,49;UBERON:0003080,4.49e-26,40;UBERON:0002780,6.44e-25,39;UBERON:0001890,6.44e-25,39;UBERON:0006240,6.44e-25,39;UBERON:0010314,1.09e-21,92;UBERON:0002619,1.10e-21,17;UBERON:0000956,8.14e-21,21;UBERON:0001869,8.14e-21,21;UBERON:0000203,8.14e-21,21;UBERON:0002021,3.67e-15,10;UBERON:0000411,3.67e-15,10;UBERON:0001950,3.67e-15,10;UBERON:0003076,7.80e-10,12;UBERON:0003057,7.80e-10,12;UBERON:0002420,1.41e-09,8;UBERON:0007245,1.41e-09,8;UBERON:0010009,1.41e-09,8;UBERON:0010011,1.41e-09,8;UBERON:0000454,1.41e-09,8;UBERON:0000025,1.55e-09,114;UBERON:0004111,8.93e-09,122;UBERON:0002240,4.33e-08,6;UBERON:0005174,4.33e-08,6;UBERON:0001137,4.33e-08,6;UBERON:0001954,4.66e-08,7;UBERON:0003022,4.66e-08,7;UBERON:0002421,4.66e-08,7;UBERON:0000349,4.66e-08,7;UBERON:0002600,4.66e-08,7;UBERON:0001948,7.15e-07,5;UBERON:0002315,7.15e-07,5 | |||
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48677489619386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.872100625521786,4.17403747195497,4.6663175777828,1.1198913730029,0,0,0,0,0,0,0,5.46254444320914,7.40587370980846,4.43681982454325,1.35537812827653,0,0,0,0,2.09720077362883,2.30530983192933,1.55534418462716,0.945041568321835,0.841299845405528,9.14083150092171,7.73039893330647,2.9397791811589,2.30029130443767,1.83843757322004,13.2139057199266,19.9192247412893,20.4296689230804,6.3305418110493,4.02545631850602,3.12548022334056,8.93385596804419,9.56696437053856,15.7382195210114,11.490514833473,13.0981946335175,10.4383689662168,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0.14084341977668,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9772735491963,6.49284791121711,0,0,0,0,14.0803201040533,16.4700217014706,3.64397621127307,22.5971616249959,24.5486839037117,15.3763152974074,17.8465389374533,0,0.124406970610093,0,1.89397670297827,0.130120442962704,0.229902104433473,1.0803727788321,1.20563854268572,0.544291993210623,0.768682321709099,1.59292931751539,3.62184719034622,0,0,0.703804496655795,0.657587197282725,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0.36012412292203,0,0,0,0,0,0,0,0,0,0,0,0,27.5479832619007,8.33527360272204,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0,0.502518772325447,0.476087281772027,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,16.3761601787548,14.8858841972098,0,0,0.94652465824877,0.390438744296638,2.15423397732799,0.238968797952552,0.668396022247182,0,0,0,0.790575555893047,9.63963949265421,0,0.178065603667255,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.214337035031592,1.06404140185364,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,18.913380805072,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0.218362563746178,0.269728692769641,0,0.26175594198403,0,0,0,0,0.165458490457098,0.194451188344048,0.645799117388655,0.337912250981556,0.352071715937262,0,0.104859344425711,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,32.7556068717899,29.4608151364593,29.7905666988486,29.730600545458,29.4585483501376,32.4819375877571,22.2757425076496,29.2708782095743,25.8291173120997,25.3702552758392,0.31136204275253,1.19707462020309,1.53660245178721,0.729320151204882,1.88651846365184,1.10306105070008,0.888986911206461,1.03017528619447,1.92551525755089,1.26348605881899,0.25347929989024,0.377252682772152,1.21733959710847,0.704276676453562,0.516919220600519,1.42888107384922,0.695305955669133,1.35036454324594,0,1.17759136107518,0.685738504770831,0.532427418478012,0.715308569841963,0.290692833264657,0.658765662907314,0.676916863133412,0.914639864363863,0.526139422875686,0.950628796921032,2.24456908663095,0.355905054372522,0.788035859004508,0.409231043169689,0.464810523557898,1.35034627686799,2.74791635731741,0.935726433781634,1.93383948643468,0.382576664137687,0.441182838239031,0.231867835620421 | |||
|short_description=p8@Slc1a2 | |||
}} |
Revision as of 21:26, 13 September 2013
Short description: | p8@Slc1a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Slc1a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 160bp_to_NM_001077514, uc008lid.2_5end |
EntrezGene: | Slc1a2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.63e-20 | 23 |
neuroblast (sensu Vertebrata) | 4.63e-20 | 23 |
neural cell | 1.46e-15 | 43 |
ectodermal cell | 5.08e-15 | 44 |
neurectodermal cell | 5.08e-15 | 44 |
neuron | 1.07e-14 | 33 |
neuronal stem cell | 1.07e-14 | 33 |
neuroblast | 1.07e-14 | 33 |
electrically signaling cell | 1.07e-14 | 33 |
electrically responsive cell | 2.12e-11 | 39 |
electrically active cell | 2.12e-11 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.