FFCP PHASE1:Mm9::chr10:4518506..4518520,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=145|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:4518506..4518520,+|id=chr10:4518506..4518520,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,1.45e-11,3;CL:0000117,8.22e-07,23;CL:0000337,8.22e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!4.92e-20!50;UBERON:0006238!4.92e-20!50;UBERON:0002616!3.41e-19!49;UBERON:0000073!3.12e-17!75;UBERON:0001016!3.12e-17!75;UBERON:0001049!3.30e-17!52;UBERON:0005068!3.30e-17!52;UBERON:0006241!3.30e-17!52;UBERON:0007135!3.30e-17!52;UBERON:0001017!2.03e-16!73;UBERON:0005743!2.03e-16!73;UBERON:0002346!2.72e-16!71;UBERON:0003075!2.72e-16!71;UBERON:0007284!2.72e-16!71;UBERON:0000033!2.89e-16!63;UBERON:0003080!4.42e-16!40;UBERON:0002791!2.88e-15!29;UBERON:0003528!2.88e-15!29;UBERON:0001893!2.88e-15!29;UBERON:0002780!3.46e-15!39;UBERON:0001890!3.46e-15!39;UBERON:0006240!3.46e-15!39;UBERON:0002020!7.19e-15!34;UBERON:0003056!2.13e-14!49;UBERON:0004121!6.54e-13!102;UBERON:0000924!6.54e-13!102;UBERON:0006601!6.54e-13!102;UBERON:0002021!3.08e-11!10;UBERON:0000411!3.08e-11!10;UBERON:0001950!3.08e-11!10;UBERON:0000956!1.80e-09!21;UBERON:0001869!1.80e-09!21;UBERON:0000203!1.80e-09!21;UBERON:0007811!7.28e-09!86;UBERON:0002619!1.22e-08!17;UBERON:0002420!2.17e-07!8;UBERON:0007245!2.17e-07!8;UBERON:0010009!2.17e-07!8;UBERON:0010011!2.17e-07!8;UBERON:0000454!2.17e-07!8;UBERON:0002298!3.35e-07!6;UBERON:0000153!4.48e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.73e-32,54;UBERON:0001049,4.49e-27,52;UBERON:0005068,4.49e-27,52;UBERON:0006241,4.49e-27,52;UBERON:0007135,4.49e-27,52;UBERON:0001017,6.91e-27,73;UBERON:0002021,1.60e-26,10;UBERON:0000411,1.60e-26,10;UBERON:0001950,1.60e-26,10;UBERON:0001016,4.71e-26,75;UBERON:0000955,2.45e-24,47;UBERON:0006238,2.45e-24,47;UBERON:0002020,1.69e-22,34;UBERON:0002616,2.07e-22,46;UBERON:0002346,3.16e-21,64;UBERON:0003075,3.16e-21,64;UBERON:0007284,3.16e-21,64;UBERON:0003080,8.73e-21,40;UBERON:0003528,4.26e-20,29;UBERON:0002791,4.26e-20,29;UBERON:0001893,4.26e-20,29;UBERON:0004121,1.23e-19,95;UBERON:0000924,1.23e-19,95;UBERON:0006601,1.23e-19,95;UBERON:0002780,9.94e-19,39;UBERON:0001890,9.94e-19,39;UBERON:0006240,9.94e-19,39;UBERON:0010371,4.24e-18,73;UBERON:0003056,2.39e-16,49;UBERON:0002619,5.48e-15,17;UBERON:0000956,1.90e-14,21;UBERON:0001869,1.90e-14,21;UBERON:0000203,1.90e-14,21;UBERON:0010314,1.70e-13,92;UBERON:0004684,1.45e-11,3;UBERON:0002275,1.45e-11,3;UBERON:0000025,4.50e-10,114;UBERON:0004111,3.92e-09,122;UBERON:0002950,1.70e-08,4;UBERON:0001891,1.70e-08,4;UBERON:0009616,1.70e-08,4;UBERON:0010286,1.70e-08,4;UBERON:0001896,2.64e-07,2;UBERON:0002298,2.64e-07,2;UBERON:0005290,2.64e-07,2;UBERON:0010096,2.64e-07,2;UBERON:0011216,3.03e-07,194;UBERON:0002420,7.96e-07,8;UBERON:0007245,7.96e-07,8;UBERON:0010009,7.96e-07,8;UBERON:0010011,7.96e-07,8;UBERON:0000454,7.96e-07,8;UBERON:0003076,8.64e-07,12;UBERON:0003057,8.64e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0,0,0.122490799214954,0,0,4.40463523997555,5.74593021383345,11.0596703944495,0.131886287730194,0.182975287204819,0.52091337055676,0.837548997004143,4.50210088025344,5.19514042441154,10.9012576625257,3.70166370077668,0,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0.11418387971906,0,0.148442139064825,0,0.304465478312141,0,0,0.352766121407114,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,3.2953940669061,1.37250180845588,1.88481528169297,1.21677024134594,2.55715457330331,1.24672826735736,1.46017136760982,0.407357455401265,0,0,0,0,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462801338662135,0,0.268273401399619,0,0,0,0.162137619091711,0,0,0,0,0.514523061896422,0,0,0.639864751605702,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,2.10981035865966,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0.584511715822624,0,1.28528526568723,0,0,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0.516856586336442,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0,0.36012218806262,0,0,0,0.356737635204141,0,0.304464949114599,0,0.42366414172764,0,0,0,0,0,0,0,2.03967832211561,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0.203319467126849,0.432021363287205,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0,0,0.56369293868419,0,0,0.194451188344048,0,0.337912250981556,0.117357238645754,0.13020438484395,0,0.483168241652012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,3.95326289831947,6.44455331110048,9.73922372846974,7.90524638780963,2.05524755931193,0.755393897389701,2.70009000092722,2.2516060161211,2.26571204492102,2.07104124700728,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0,0,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.114870937911227,0,0,0.192909220463705,0,0,0.685738504770831,0.177475806159338,0.238436189947321,0.145346416632329,0,0.423073039458382,0,0.263069711437843,0,0,0.118635018124174,0.29551344712669,0,0,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0,0|short_description=p@chr10:4518506..4518520,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=145 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:4518506..4518520,+ | |||
|id=chr10:4518506..4518520,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.45e-11,3;CL:0000117,8.22e-07,23;CL:0000337,8.22e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!4.92e-20!50;UBERON:0006238!4.92e-20!50;UBERON:0002616!3.41e-19!49;UBERON:0000073!3.12e-17!75;UBERON:0001016!3.12e-17!75;UBERON:0001049!3.30e-17!52;UBERON:0005068!3.30e-17!52;UBERON:0006241!3.30e-17!52;UBERON:0007135!3.30e-17!52;UBERON:0001017!2.03e-16!73;UBERON:0005743!2.03e-16!73;UBERON:0002346!2.72e-16!71;UBERON:0003075!2.72e-16!71;UBERON:0007284!2.72e-16!71;UBERON:0000033!2.89e-16!63;UBERON:0003080!4.42e-16!40;UBERON:0002791!2.88e-15!29;UBERON:0003528!2.88e-15!29;UBERON:0001893!2.88e-15!29;UBERON:0002780!3.46e-15!39;UBERON:0001890!3.46e-15!39;UBERON:0006240!3.46e-15!39;UBERON:0002020!7.19e-15!34;UBERON:0003056!2.13e-14!49;UBERON:0004121!6.54e-13!102;UBERON:0000924!6.54e-13!102;UBERON:0006601!6.54e-13!102;UBERON:0002021!3.08e-11!10;UBERON:0000411!3.08e-11!10;UBERON:0001950!3.08e-11!10;UBERON:0000956!1.80e-09!21;UBERON:0001869!1.80e-09!21;UBERON:0000203!1.80e-09!21;UBERON:0007811!7.28e-09!86;UBERON:0002619!1.22e-08!17;UBERON:0002420!2.17e-07!8;UBERON:0007245!2.17e-07!8;UBERON:0010009!2.17e-07!8;UBERON:0010011!2.17e-07!8;UBERON:0000454!2.17e-07!8;UBERON:0002298!3.35e-07!6;UBERON:0000153!4.48e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.73e-32,54;UBERON:0001049,4.49e-27,52;UBERON:0005068,4.49e-27,52;UBERON:0006241,4.49e-27,52;UBERON:0007135,4.49e-27,52;UBERON:0001017,6.91e-27,73;UBERON:0002021,1.60e-26,10;UBERON:0000411,1.60e-26,10;UBERON:0001950,1.60e-26,10;UBERON:0001016,4.71e-26,75;UBERON:0000955,2.45e-24,47;UBERON:0006238,2.45e-24,47;UBERON:0002020,1.69e-22,34;UBERON:0002616,2.07e-22,46;UBERON:0002346,3.16e-21,64;UBERON:0003075,3.16e-21,64;UBERON:0007284,3.16e-21,64;UBERON:0003080,8.73e-21,40;UBERON:0003528,4.26e-20,29;UBERON:0002791,4.26e-20,29;UBERON:0001893,4.26e-20,29;UBERON:0004121,1.23e-19,95;UBERON:0000924,1.23e-19,95;UBERON:0006601,1.23e-19,95;UBERON:0002780,9.94e-19,39;UBERON:0001890,9.94e-19,39;UBERON:0006240,9.94e-19,39;UBERON:0010371,4.24e-18,73;UBERON:0003056,2.39e-16,49;UBERON:0002619,5.48e-15,17;UBERON:0000956,1.90e-14,21;UBERON:0001869,1.90e-14,21;UBERON:0000203,1.90e-14,21;UBERON:0010314,1.70e-13,92;UBERON:0004684,1.45e-11,3;UBERON:0002275,1.45e-11,3;UBERON:0000025,4.50e-10,114;UBERON:0004111,3.92e-09,122;UBERON:0002950,1.70e-08,4;UBERON:0001891,1.70e-08,4;UBERON:0009616,1.70e-08,4;UBERON:0010286,1.70e-08,4;UBERON:0001896,2.64e-07,2;UBERON:0002298,2.64e-07,2;UBERON:0005290,2.64e-07,2;UBERON:0010096,2.64e-07,2;UBERON:0011216,3.03e-07,194;UBERON:0002420,7.96e-07,8;UBERON:0007245,7.96e-07,8;UBERON:0010009,7.96e-07,8;UBERON:0010011,7.96e-07,8;UBERON:0000454,7.96e-07,8;UBERON:0003076,8.64e-07,12;UBERON:0003057,8.64e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0,0,0.122490799214954,0,0,4.40463523997555,5.74593021383345,11.0596703944495,0.131886287730194,0.182975287204819,0.52091337055676,0.837548997004143,4.50210088025344,5.19514042441154,10.9012576625257,3.70166370077668,0,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0.11418387971906,0,0.148442139064825,0,0.304465478312141,0,0,0.352766121407114,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,3.2953940669061,1.37250180845588,1.88481528169297,1.21677024134594,2.55715457330331,1.24672826735736,1.46017136760982,0.407357455401265,0,0,0,0,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462801338662135,0,0.268273401399619,0,0,0,0.162137619091711,0,0,0,0,0.514523061896422,0,0,0.639864751605702,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,2.10981035865966,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0.584511715822624,0,1.28528526568723,0,0,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0.516856586336442,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0,0.36012218806262,0,0,0,0.356737635204141,0,0.304464949114599,0,0.42366414172764,0,0,0,0,0,0,0,2.03967832211561,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0.203319467126849,0.432021363287205,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0,0,0.56369293868419,0,0,0.194451188344048,0,0.337912250981556,0.117357238645754,0.13020438484395,0,0.483168241652012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,3.95326289831947,6.44455331110048,9.73922372846974,7.90524638780963,2.05524755931193,0.755393897389701,2.70009000092722,2.2516060161211,2.26571204492102,2.07104124700728,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0,0,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.114870937911227,0,0,0.192909220463705,0,0,0.685738504770831,0.177475806159338,0.238436189947321,0.145346416632329,0,0.423073039458382,0,0.263069711437843,0,0,0.118635018124174,0.29551344712669,0,0,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0,0 | |||
|short_description=p@chr10:4518506..4518520,+ | |||
}} |
Revision as of 16:48, 12 September 2013
Short description: | p@chr10:4518506..4518520, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:4518506..4518520, + |
Coexpression cluster: | MCL_coexpression_mm9:145 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.45e-11 | 3 |
CNS neuron (sensu Vertebrata) | 8.22e-07 | 23 |
neuroblast (sensu Vertebrata) | 8.22e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.