FFCP PHASE1:Mm9::chr3:118134444..118134456,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=958|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:118134444..118134456,+|id=chr3:118134444..118134456,+|ontology_enrichment_celltype=CL:0000540!1.66e-20!33;CL:0000047!1.66e-20!33;CL:0000031!1.66e-20!33;CL:0000404!1.66e-20!33;CL:0002319!1.34e-15!43;CL:0000117!1.60e-15!23;CL:0000337!1.60e-15!23;CL:0000393!2.22e-15!39;CL:0000211!2.22e-15!39;CL:0000221!6.05e-15!44;CL:0000133!6.05e-15!44;CL:0000055!1.26e-11!50;CL:0000107!4.09e-07!9|ontology_enrichment_celltype_v019_2=CL:0000540,2.67e-28,33;CL:0000047,2.67e-28,33;CL:0000031,2.67e-28,33;CL:0000404,2.67e-28,33;CL:0000393,5.71e-23,39;CL:0000211,5.71e-23,39;CL:0000117,6.29e-21,23;CL:0000337,6.29e-21,23;CL:0002319,3.01e-20,43;CL:0000221,1.21e-19,44;CL:0000133,1.21e-19,44;CL:0002321,4.33e-10,70;CL:0000107,2.51e-09,9;CL:0002613,2.23e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.31e-28!75;UBERON:0001016!1.31e-28!75;UBERON:0001017!6.98e-28!73;UBERON:0005743!6.98e-28!73;UBERON:0002020!2.46e-23!34;UBERON:0001049!4.50e-23!52;UBERON:0005068!4.50e-23!52;UBERON:0006241!4.50e-23!52;UBERON:0007135!4.50e-23!52;UBERON:0002346!7.09e-22!71;UBERON:0003075!7.09e-22!71;UBERON:0007284!7.09e-22!71;UBERON:0004121!6.49e-21!102;UBERON:0000924!6.49e-21!102;UBERON:0006601!6.49e-21!102;UBERON:0002616!8.90e-21!49;UBERON:0003080!3.62e-20!40;UBERON:0000955!4.94e-20!50;UBERON:0006238!4.94e-20!50;UBERON:0002791!7.99e-20!29;UBERON:0003528!7.99e-20!29;UBERON:0001893!7.99e-20!29;UBERON:0002780!2.26e-19!39;UBERON:0001890!2.26e-19!39;UBERON:0006240!2.26e-19!39;UBERON:0003056!1.38e-14!49;UBERON:0000956!1.37e-13!21;UBERON:0001869!1.37e-13!21;UBERON:0000203!1.37e-13!21;UBERON:0000033!2.84e-13!63;UBERON:0002619!1.68e-11!17;UBERON:0002021!5.22e-10!10;UBERON:0000411!5.22e-10!10;UBERON:0001950!5.22e-10!10;UBERON:0000010!1.71e-07!11;UBERON:0002420!1.78e-07!8;UBERON:0007245!1.78e-07!8;UBERON:0010009!1.78e-07!8;UBERON:0010011!1.78e-07!8;UBERON:0000454!1.78e-07!8;UBERON:0002410!4.09e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.63e-35,34;UBERON:0001017,1.67e-33,73;UBERON:0001016,2.32e-32,75;UBERON:0003528,4.05e-30,29;UBERON:0002791,4.05e-30,29;UBERON:0001893,4.05e-30,29;UBERON:0000073,7.85e-27,54;UBERON:0003080,2.07e-24,40;UBERON:0001049,2.29e-24,52;UBERON:0005068,2.29e-24,52;UBERON:0006241,2.29e-24,52;UBERON:0007135,2.29e-24,52;UBERON:0004121,1.39e-23,95;UBERON:0000924,1.39e-23,95;UBERON:0006601,1.39e-23,95;UBERON:0002780,5.86e-23,39;UBERON:0001890,5.86e-23,39;UBERON:0006240,5.86e-23,39;UBERON:0002346,1.81e-21,64;UBERON:0003075,1.81e-21,64;UBERON:0007284,1.81e-21,64;UBERON:0002616,2.26e-20,46;UBERON:0000955,8.43e-20,47;UBERON:0006238,8.43e-20,47;UBERON:0000956,2.15e-19,21;UBERON:0001869,2.15e-19,21;UBERON:0000203,2.15e-19,21;UBERON:0002619,6.11e-19,17;UBERON:0003056,9.98e-19,49;UBERON:0010371,7.31e-18,73;UBERON:0002021,1.34e-16,10;UBERON:0000411,1.34e-16,10;UBERON:0001950,1.34e-16,10;UBERON:0010314,1.03e-13,92;UBERON:0002420,6.39e-12,8;UBERON:0007245,6.39e-12,8;UBERON:0010009,6.39e-12,8;UBERON:0010011,6.39e-12,8;UBERON:0000454,6.39e-12,8;UBERON:0002410,2.51e-09,9;UBERON:0002950,3.29e-08,4;UBERON:0001891,3.29e-08,4;UBERON:0009616,3.29e-08,4;UBERON:0010286,3.29e-08,4;UBERON:0000010,1.95e-07,11;UBERON:0011216,2.01e-07,194;UBERON:0000025,3.10e-07,114;UBERON:0000369,5.29e-07,5;UBERON:0002435,5.29e-07,5;UBERON:0000204,5.29e-07,5;UBERON:0010082,5.29e-07,5|phase1_expression=0,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,3.03474691289397,1.5869729378161,0,0,0,0,0,0,0,0,0.518448061542388,0.540023753326763,1.05162480675691,1.14260393761521,1.32521124570968,6.36952155917761,6.99671938433125,0.919218786610021,1.10115880999389,0.510749352340751,1.22885226604995,5.80299666012853,3.47653045689157,3.12548022334056,1.3959149950069,2.8138130501584,2.75036845998258,0.589257170947335,1.99320353118744,2.60959224155421,0.151452386666368,0.604572480854284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.445326417194474,0.520455980298408,1.82679286987285,0.461230994512117,0.753613202763113,0.705532242814229,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,1.9472783122627,0.457500602818626,1.38219787324151,2.25971616249959,3.06858548796397,0.41557608911912,1.94689515681309,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,1.85228302282712,0,0,0.213288250535234,1.16118335930219,0.902072229254653,0.80673409849337,0.444756087689741,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.586058432961016,0,0,0.315508219416257,1.56175497718655,1.07711698866399,0.716906393857656,1.33679204449436,2.26461224631066,2.02405350837447,2.63030272120181,1.58115111178609,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0,0.720244376125241,0.388076051348264,0.214337035031592,0,0.178368817602071,0.493647061806363,0,0,0,0,0,0,0,0,0,0.291480836629851,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.648032044930808,0.209088296014469,0.436725127492355,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51801474093653,4.60325236507177,3.43737308063638,4.1244763762485,2.74033007908257,0.755393897389701,4.05013500139084,4.05289082901798,3.62513927187364,2.07104124700728,0.103787347584177,1.19707462020309,1.19513524027894,1.21553358534147,0,0,0.44449345560323,0,0.320919209591815,1.01078884705519,0.760437899670719,0,0.561849044819294,0.512201219238954,0.34461281373368,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,1.17759136107518,0.685738504770831,0.70990322463735,0,0.436039249896986,0.564656282491984,0.761531471025089,0.548783918618318,0.789209134313529,0.814824683075171,0.561142271657738,0.593175090620871,0.689531376628944,0.409231043169689,0.929621047115796,0.385813221962283,1.49886346762768,0,0.859484216193193,0.382576664137687,0,0.231867835620421|short_description=p@chr3:118134444..118134456,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=958 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:118134444..118134456,+ | |||
|id=chr3:118134444..118134456,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.66e-20!33;CL:0000047!1.66e-20!33;CL:0000031!1.66e-20!33;CL:0000404!1.66e-20!33;CL:0002319!1.34e-15!43;CL:0000117!1.60e-15!23;CL:0000337!1.60e-15!23;CL:0000393!2.22e-15!39;CL:0000211!2.22e-15!39;CL:0000221!6.05e-15!44;CL:0000133!6.05e-15!44;CL:0000055!1.26e-11!50;CL:0000107!4.09e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.67e-28,33;CL:0000047,2.67e-28,33;CL:0000031,2.67e-28,33;CL:0000404,2.67e-28,33;CL:0000393,5.71e-23,39;CL:0000211,5.71e-23,39;CL:0000117,6.29e-21,23;CL:0000337,6.29e-21,23;CL:0002319,3.01e-20,43;CL:0000221,1.21e-19,44;CL:0000133,1.21e-19,44;CL:0002321,4.33e-10,70;CL:0000107,2.51e-09,9;CL:0002613,2.23e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.31e-28!75;UBERON:0001016!1.31e-28!75;UBERON:0001017!6.98e-28!73;UBERON:0005743!6.98e-28!73;UBERON:0002020!2.46e-23!34;UBERON:0001049!4.50e-23!52;UBERON:0005068!4.50e-23!52;UBERON:0006241!4.50e-23!52;UBERON:0007135!4.50e-23!52;UBERON:0002346!7.09e-22!71;UBERON:0003075!7.09e-22!71;UBERON:0007284!7.09e-22!71;UBERON:0004121!6.49e-21!102;UBERON:0000924!6.49e-21!102;UBERON:0006601!6.49e-21!102;UBERON:0002616!8.90e-21!49;UBERON:0003080!3.62e-20!40;UBERON:0000955!4.94e-20!50;UBERON:0006238!4.94e-20!50;UBERON:0002791!7.99e-20!29;UBERON:0003528!7.99e-20!29;UBERON:0001893!7.99e-20!29;UBERON:0002780!2.26e-19!39;UBERON:0001890!2.26e-19!39;UBERON:0006240!2.26e-19!39;UBERON:0003056!1.38e-14!49;UBERON:0000956!1.37e-13!21;UBERON:0001869!1.37e-13!21;UBERON:0000203!1.37e-13!21;UBERON:0000033!2.84e-13!63;UBERON:0002619!1.68e-11!17;UBERON:0002021!5.22e-10!10;UBERON:0000411!5.22e-10!10;UBERON:0001950!5.22e-10!10;UBERON:0000010!1.71e-07!11;UBERON:0002420!1.78e-07!8;UBERON:0007245!1.78e-07!8;UBERON:0010009!1.78e-07!8;UBERON:0010011!1.78e-07!8;UBERON:0000454!1.78e-07!8;UBERON:0002410!4.09e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.63e-35,34;UBERON:0001017,1.67e-33,73;UBERON:0001016,2.32e-32,75;UBERON:0003528,4.05e-30,29;UBERON:0002791,4.05e-30,29;UBERON:0001893,4.05e-30,29;UBERON:0000073,7.85e-27,54;UBERON:0003080,2.07e-24,40;UBERON:0001049,2.29e-24,52;UBERON:0005068,2.29e-24,52;UBERON:0006241,2.29e-24,52;UBERON:0007135,2.29e-24,52;UBERON:0004121,1.39e-23,95;UBERON:0000924,1.39e-23,95;UBERON:0006601,1.39e-23,95;UBERON:0002780,5.86e-23,39;UBERON:0001890,5.86e-23,39;UBERON:0006240,5.86e-23,39;UBERON:0002346,1.81e-21,64;UBERON:0003075,1.81e-21,64;UBERON:0007284,1.81e-21,64;UBERON:0002616,2.26e-20,46;UBERON:0000955,8.43e-20,47;UBERON:0006238,8.43e-20,47;UBERON:0000956,2.15e-19,21;UBERON:0001869,2.15e-19,21;UBERON:0000203,2.15e-19,21;UBERON:0002619,6.11e-19,17;UBERON:0003056,9.98e-19,49;UBERON:0010371,7.31e-18,73;UBERON:0002021,1.34e-16,10;UBERON:0000411,1.34e-16,10;UBERON:0001950,1.34e-16,10;UBERON:0010314,1.03e-13,92;UBERON:0002420,6.39e-12,8;UBERON:0007245,6.39e-12,8;UBERON:0010009,6.39e-12,8;UBERON:0010011,6.39e-12,8;UBERON:0000454,6.39e-12,8;UBERON:0002410,2.51e-09,9;UBERON:0002950,3.29e-08,4;UBERON:0001891,3.29e-08,4;UBERON:0009616,3.29e-08,4;UBERON:0010286,3.29e-08,4;UBERON:0000010,1.95e-07,11;UBERON:0011216,2.01e-07,194;UBERON:0000025,3.10e-07,114;UBERON:0000369,5.29e-07,5;UBERON:0002435,5.29e-07,5;UBERON:0000204,5.29e-07,5;UBERON:0010082,5.29e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,3.03474691289397,1.5869729378161,0,0,0,0,0,0,0,0,0.518448061542388,0.540023753326763,1.05162480675691,1.14260393761521,1.32521124570968,6.36952155917761,6.99671938433125,0.919218786610021,1.10115880999389,0.510749352340751,1.22885226604995,5.80299666012853,3.47653045689157,3.12548022334056,1.3959149950069,2.8138130501584,2.75036845998258,0.589257170947335,1.99320353118744,2.60959224155421,0.151452386666368,0.604572480854284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.445326417194474,0.520455980298408,1.82679286987285,0.461230994512117,0.753613202763113,0.705532242814229,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,1.9472783122627,0.457500602818626,1.38219787324151,2.25971616249959,3.06858548796397,0.41557608911912,1.94689515681309,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,1.85228302282712,0,0,0.213288250535234,1.16118335930219,0.902072229254653,0.80673409849337,0.444756087689741,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.586058432961016,0,0,0.315508219416257,1.56175497718655,1.07711698866399,0.716906393857656,1.33679204449436,2.26461224631066,2.02405350837447,2.63030272120181,1.58115111178609,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0,0.720244376125241,0.388076051348264,0.214337035031592,0,0.178368817602071,0.493647061806363,0,0,0,0,0,0,0,0,0,0.291480836629851,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.648032044930808,0.209088296014469,0.436725127492355,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51801474093653,4.60325236507177,3.43737308063638,4.1244763762485,2.74033007908257,0.755393897389701,4.05013500139084,4.05289082901798,3.62513927187364,2.07104124700728,0.103787347584177,1.19707462020309,1.19513524027894,1.21553358534147,0,0,0.44449345560323,0,0.320919209591815,1.01078884705519,0.760437899670719,0,0.561849044819294,0.512201219238954,0.34461281373368,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,1.17759136107518,0.685738504770831,0.70990322463735,0,0.436039249896986,0.564656282491984,0.761531471025089,0.548783918618318,0.789209134313529,0.814824683075171,0.561142271657738,0.593175090620871,0.689531376628944,0.409231043169689,0.929621047115796,0.385813221962283,1.49886346762768,0,0.859484216193193,0.382576664137687,0,0.231867835620421 | |||
|short_description=p@chr3:118134444..118134456,+ | |||
}} |
Revision as of 01:21, 14 September 2013
Short description: | p@chr3:118134444..118134456, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:118134444..118134456, + |
Coexpression cluster: | MCL_coexpression_mm9:958 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.67e-28 | 33 |
neuronal stem cell | 2.67e-28 | 33 |
neuroblast | 2.67e-28 | 33 |
electrically signaling cell | 2.67e-28 | 33 |
electrically responsive cell | 5.71e-23 | 39 |
electrically active cell | 5.71e-23 | 39 |
CNS neuron (sensu Vertebrata) | 6.29e-21 | 23 |
neuroblast (sensu Vertebrata) | 6.29e-21 | 23 |
neural cell | 3.01e-20 | 43 |
ectodermal cell | 1.21e-19 | 44 |
neurectodermal cell | 1.21e-19 | 44 |
embryonic cell | 4.33e-10 | 70 |
autonomic neuron | 2.51e-09 | 9 |
striatum neuron | 2.23e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.