FFCP PHASE1:Mm9::chr14:14286708..14286747,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=72003|HGNC=|MCL_coexpression_id=360|UniProt=|association_with_transcript=123bp_to_ENSMUST00000147677_5end|description=CAGE_peak_4_at_Synpr_5end|id=chr14:14286708..14286747,+|ontology_enrichment_celltype=CL:0000117!2.68e-11!23;CL:0000337!2.68e-11!23;CL:0000540!3.51e-07!33;CL:0000047!3.51e-07!33;CL:0000031!3.51e-07!33;CL:0000404!3.51e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,7.84e-16,23;CL:0000337,7.84e-16,23;CL:0000540,5.79e-11,33;CL:0000047,5.79e-11,33;CL:0000031,5.79e-11,33;CL:0000404,5.79e-11,33;CL:0000393,1.37e-08,39;CL:0000211,1.37e-08,39;CL:0002319,2.29e-08,43;CL:0000221,4.50e-08,44;CL:0000133,4.50e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.96e-21!63;UBERON:0002346!2.63e-20!71;UBERON:0003075!2.63e-20!71;UBERON:0007284!2.63e-20!71;UBERON:0004121!9.52e-20!102;UBERON:0000924!9.52e-20!102;UBERON:0006601!9.52e-20!102;UBERON:0007811!1.81e-19!86;UBERON:0003056!2.83e-19!49;UBERON:0000073!6.66e-19!75;UBERON:0001016!6.66e-19!75;UBERON:0001017!4.76e-18!73;UBERON:0005743!4.76e-18!73;UBERON:0001049!6.52e-18!52;UBERON:0005068!6.52e-18!52;UBERON:0006241!6.52e-18!52;UBERON:0007135!6.52e-18!52;UBERON:0000955!1.48e-16!50;UBERON:0006238!1.48e-16!50;UBERON:0000153!2.25e-16!94;UBERON:0002616!9.72e-16!49;UBERON:0002020!3.73e-15!34;UBERON:0003080!6.89e-15!40;UBERON:0002780!4.28e-14!39;UBERON:0001890!4.28e-14!39;UBERON:0006240!4.28e-14!39;UBERON:0002791!1.94e-11!29;UBERON:0003528!1.94e-11!29;UBERON:0001893!1.94e-11!29;UBERON:0002420!1.03e-07!8;UBERON:0007245!1.03e-07!8;UBERON:0010009!1.03e-07!8;UBERON:0010011!1.03e-07!8;UBERON:0000454!1.03e-07!8;UBERON:0002021!4.53e-07!10;UBERON:0000411!4.53e-07!10;UBERON:0001950!4.53e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.07e-28,64;UBERON:0003075,1.07e-28,64;UBERON:0007284,1.07e-28,64;UBERON:0000073,1.40e-28,54;UBERON:0001016,9.55e-27,75;UBERON:0001017,3.19e-26,73;UBERON:0001049,1.03e-25,52;UBERON:0005068,1.03e-25,52;UBERON:0006241,1.03e-25,52;UBERON:0007135,1.03e-25,52;UBERON:0004121,1.71e-25,95;UBERON:0000924,1.71e-25,95;UBERON:0006601,1.71e-25,95;UBERON:0010371,7.00e-24,73;UBERON:0002020,6.02e-23,34;UBERON:0003056,5.33e-21,49;UBERON:0000955,1.73e-19,47;UBERON:0006238,1.73e-19,47;UBERON:0002616,4.01e-18,46;UBERON:0003080,4.69e-18,40;UBERON:0010314,7.77e-17,92;UBERON:0002780,1.01e-16,39;UBERON:0001890,1.01e-16,39;UBERON:0006240,1.01e-16,39;UBERON:0003528,4.13e-16,29;UBERON:0002791,4.13e-16,29;UBERON:0001893,4.13e-16,29;UBERON:0002420,1.02e-13,8;UBERON:0007245,1.02e-13,8;UBERON:0010009,1.02e-13,8;UBERON:0010011,1.02e-13,8;UBERON:0000454,1.02e-13,8;UBERON:0002240,2.28e-10,6;UBERON:0005174,2.28e-10,6;UBERON:0001137,2.28e-10,6;UBERON:0001948,3.75e-09,5;UBERON:0002315,3.75e-09,5;UBERON:0000369,3.90e-09,5;UBERON:0002435,3.90e-09,5;UBERON:0000204,3.90e-09,5;UBERON:0010082,3.90e-09,5;UBERON:0002021,8.28e-09,10;UBERON:0000411,8.28e-09,10;UBERON:0001950,8.28e-09,10;UBERON:0003076,2.86e-08,12;UBERON:0003057,2.86e-08,12;UBERON:0002950,7.68e-08,4;UBERON:0001891,7.68e-08,4;UBERON:0009616,7.68e-08,4;UBERON:0010286,7.68e-08,4;UBERON:0000025,4.46e-07,114;UBERON:0002619,5.24e-07,17|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,1.5869729378161,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0.103689612308478,0.135005938331691,0,3.71346279724945,2.87129103237098,0.489963196859816,0.0958454710182364,0,2.20231761998777,3.83062014255563,2.91852413186863,2.37395317914349,2.92760459527711,1.56274011167028,2.51264699101243,4.50210088025344,4.27835093775068,2.94628585473668,4.8406371471695,2.23679334990361,0.37863096666592,1.13357340160178,0,0,0,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.44099749440738,17.3850229071078,11.1832373380449,5.04090528557602,6.90431734791892,4.57133698031032,8.11206315338788,0.509196819251581,0.124406970610093,0,0.210441855886474,0.260240885925407,0.919608417733892,1.0803727788321,2.56198190320716,1.7009124787832,1.0249097622788,2.06143794031403,0.776110112217047,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,1.13195073617213,0,0,0,0.232236671860439,0.257734922644187,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,2.72936002979246,2.81308047821288,0,0,0,0,1.07711698866399,0,0,0,0,0,0,31.1681676929153,0,0.35613120733451,1.46598263418218,0,0,0,0.302323556964751,0.377210159511796,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0.643011105094777,1.06404140185364,1.07021290561242,0.987294123612726,0.913394847343798,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,1.66882771809459,0,0,0.3703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| ||
|EntrezGene=72003 | |||
|HGNC= | |||
|MCL_coexpression_id=360 | |||
|UniProt= | |||
|association_with_transcript=123bp_to_ENSMUST00000147677_5end | |||
|description=CAGE_peak_4_at_Synpr_5end | |||
|id=chr14:14286708..14286747,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.68e-11!23;CL:0000337!2.68e-11!23;CL:0000540!3.51e-07!33;CL:0000047!3.51e-07!33;CL:0000031!3.51e-07!33;CL:0000404!3.51e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.84e-16,23;CL:0000337,7.84e-16,23;CL:0000540,5.79e-11,33;CL:0000047,5.79e-11,33;CL:0000031,5.79e-11,33;CL:0000404,5.79e-11,33;CL:0000393,1.37e-08,39;CL:0000211,1.37e-08,39;CL:0002319,2.29e-08,43;CL:0000221,4.50e-08,44;CL:0000133,4.50e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.96e-21!63;UBERON:0002346!2.63e-20!71;UBERON:0003075!2.63e-20!71;UBERON:0007284!2.63e-20!71;UBERON:0004121!9.52e-20!102;UBERON:0000924!9.52e-20!102;UBERON:0006601!9.52e-20!102;UBERON:0007811!1.81e-19!86;UBERON:0003056!2.83e-19!49;UBERON:0000073!6.66e-19!75;UBERON:0001016!6.66e-19!75;UBERON:0001017!4.76e-18!73;UBERON:0005743!4.76e-18!73;UBERON:0001049!6.52e-18!52;UBERON:0005068!6.52e-18!52;UBERON:0006241!6.52e-18!52;UBERON:0007135!6.52e-18!52;UBERON:0000955!1.48e-16!50;UBERON:0006238!1.48e-16!50;UBERON:0000153!2.25e-16!94;UBERON:0002616!9.72e-16!49;UBERON:0002020!3.73e-15!34;UBERON:0003080!6.89e-15!40;UBERON:0002780!4.28e-14!39;UBERON:0001890!4.28e-14!39;UBERON:0006240!4.28e-14!39;UBERON:0002791!1.94e-11!29;UBERON:0003528!1.94e-11!29;UBERON:0001893!1.94e-11!29;UBERON:0002420!1.03e-07!8;UBERON:0007245!1.03e-07!8;UBERON:0010009!1.03e-07!8;UBERON:0010011!1.03e-07!8;UBERON:0000454!1.03e-07!8;UBERON:0002021!4.53e-07!10;UBERON:0000411!4.53e-07!10;UBERON:0001950!4.53e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.07e-28,64;UBERON:0003075,1.07e-28,64;UBERON:0007284,1.07e-28,64;UBERON:0000073,1.40e-28,54;UBERON:0001016,9.55e-27,75;UBERON:0001017,3.19e-26,73;UBERON:0001049,1.03e-25,52;UBERON:0005068,1.03e-25,52;UBERON:0006241,1.03e-25,52;UBERON:0007135,1.03e-25,52;UBERON:0004121,1.71e-25,95;UBERON:0000924,1.71e-25,95;UBERON:0006601,1.71e-25,95;UBERON:0010371,7.00e-24,73;UBERON:0002020,6.02e-23,34;UBERON:0003056,5.33e-21,49;UBERON:0000955,1.73e-19,47;UBERON:0006238,1.73e-19,47;UBERON:0002616,4.01e-18,46;UBERON:0003080,4.69e-18,40;UBERON:0010314,7.77e-17,92;UBERON:0002780,1.01e-16,39;UBERON:0001890,1.01e-16,39;UBERON:0006240,1.01e-16,39;UBERON:0003528,4.13e-16,29;UBERON:0002791,4.13e-16,29;UBERON:0001893,4.13e-16,29;UBERON:0002420,1.02e-13,8;UBERON:0007245,1.02e-13,8;UBERON:0010009,1.02e-13,8;UBERON:0010011,1.02e-13,8;UBERON:0000454,1.02e-13,8;UBERON:0002240,2.28e-10,6;UBERON:0005174,2.28e-10,6;UBERON:0001137,2.28e-10,6;UBERON:0001948,3.75e-09,5;UBERON:0002315,3.75e-09,5;UBERON:0000369,3.90e-09,5;UBERON:0002435,3.90e-09,5;UBERON:0000204,3.90e-09,5;UBERON:0010082,3.90e-09,5;UBERON:0002021,8.28e-09,10;UBERON:0000411,8.28e-09,10;UBERON:0001950,8.28e-09,10;UBERON:0003076,2.86e-08,12;UBERON:0003057,2.86e-08,12;UBERON:0002950,7.68e-08,4;UBERON:0001891,7.68e-08,4;UBERON:0009616,7.68e-08,4;UBERON:0010286,7.68e-08,4;UBERON:0000025,4.46e-07,114;UBERON:0002619,5.24e-07,17 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,1.5869729378161,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0.103689612308478,0.135005938331691,0,3.71346279724945,2.87129103237098,0.489963196859816,0.0958454710182364,0,2.20231761998777,3.83062014255563,2.91852413186863,2.37395317914349,2.92760459527711,1.56274011167028,2.51264699101243,4.50210088025344,4.27835093775068,2.94628585473668,4.8406371471695,2.23679334990361,0.37863096666592,1.13357340160178,0,0,0,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.44099749440738,17.3850229071078,11.1832373380449,5.04090528557602,6.90431734791892,4.57133698031032,8.11206315338788,0.509196819251581,0.124406970610093,0,0.210441855886474,0.260240885925407,0.919608417733892,1.0803727788321,2.56198190320716,1.7009124787832,1.0249097622788,2.06143794031403,0.776110112217047,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,1.13195073617213,0,0,0,0.232236671860439,0.257734922644187,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,2.72936002979246,2.81308047821288,0,0,0,0,1.07711698866399,0,0,0,0,0,0,31.1681676929153,0,0.35613120733451,1.46598263418218,0,0,0,0.302323556964751,0.377210159511796,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0.643011105094777,1.06404140185364,1.07021290561242,0.987294123612726,0.913394847343798,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,1.66882771809459,0,0,0.370389054739423,0,0,0,0,0,0,0,0,0,0.540026704109006,0.418176592028937,0.218362563746178,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,1.01362607645082,1.23253148597793,1.81889152168913,1.07416017400489,0.596044064343795,0.600977247599844,0.590758108698309,0.100966449948148,0.304827226619999,0.201652370273681,0.292373642219257,0.481059208201647,0,0.453460767230423,0,0,0,0,0,0,0,0,1.12950368523413,2.76195141904306,1.71868654031819,1.03111909406213,1.37016503954128,0.755393897389701,4.72515750162264,0.45032120322422,1.81256963593682,1.55328093525546,0.62272408550506,0.798049746802062,0.512200817262403,0.486213434136588,0.209613162627982,0.367687016900028,0.222246727801615,0.412070114477788,0,0.758091635291392,0.760437899670719,0.188626341386076,0.37456602987953,0.384150914429216,0.516919220600519,1.90517476513229,0.695305955669133,0.192909220463705,1.23625770240992,1.47198920134397,0.685738504770831,0.177475806159338,0.238436189947321,0.581385666529314,0.658765662907314,1.01537529470012,0.73171189149109,0.789209134313529,0.679020569229309,0.561142271657738,0.593175090620871,0.492522411877817,1.22769312950907,0.464810523557898,0.964533054905707,0.499621155875892,1.40358965067245,0.429742108096597,0.382576664137687,0.441182838239031,0.231867835620421 | |||
|short_description=p4@Synpr | |||
}} |
Revision as of 01:41, 13 September 2013
Short description: | p4@Synpr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Synpr_5end |
Coexpression cluster: | MCL_coexpression_mm9:360 |
Association with transcript: | 123bp_to_ENSMUST00000147677_5end |
EntrezGene: | Synpr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.84e-16 | 23 |
neuroblast (sensu Vertebrata) | 7.84e-16 | 23 |
neuron | 5.79e-11 | 33 |
neuronal stem cell | 5.79e-11 | 33 |
neuroblast | 5.79e-11 | 33 |
electrically signaling cell | 5.79e-11 | 33 |
electrically responsive cell | 1.37e-08 | 39 |
electrically active cell | 1.37e-08 | 39 |
neural cell | 2.29e-08 | 43 |
ectodermal cell | 4.50e-08 | 44 |
neurectodermal cell | 4.50e-08 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.