FFCP PHASE1:Mm9::chr13:83866952..83866963,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=22|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:83866952..83866963,+|id=chr13:83866952..83866963,+|ontology_enrichment_celltype=CL:0000540!8.61e-22!33;CL:0000047!8.61e-22!33;CL:0000031!8.61e-22!33;CL:0000404!8.61e-22!33;CL:0000221!5.92e-21!44;CL:0000133!5.92e-21!44;CL:0002319!8.58e-21!43;CL:0000117!1.73e-19!23;CL:0000337!1.73e-19!23;CL:0000393!1.77e-16!39;CL:0000211!1.77e-16!39;CL:0000055!7.19e-16!50;CL:0002321!3.68e-08!70;CL:0000220!3.68e-08!70;CL:0002609!2.64e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,4.38e-31,23;CL:0000337,4.38e-31,23;CL:0000540,1.81e-30,33;CL:0000047,1.81e-30,33;CL:0000031,1.81e-30,33;CL:0000404,1.81e-30,33;CL:0002319,4.01e-25,43;CL:0000393,1.41e-24,39;CL:0000211,1.41e-24,39;CL:0000221,2.30e-24,44;CL:0000133,2.30e-24,44;CL:0002321,2.36e-12,70;CL:0002609,9.62e-12,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.98e-38!73;UBERON:0005743!7.98e-38!73;UBERON:0000073!3.82e-36!75;UBERON:0001016!3.82e-36!75;UBERON:0004121!2.52e-32!102;UBERON:0000924!2.52e-32!102;UBERON:0006601!2.52e-32!102;UBERON:0002346!8.94e-29!71;UBERON:0003075!8.94e-29!71;UBERON:0007284!8.94e-29!71;UBERON:0000033!5.18e-28!63;UBERON:0001049!3.49e-26!52;UBERON:0005068!3.49e-26!52;UBERON:0006241!3.49e-26!52;UBERON:0007135!3.49e-26!52;UBERON:0002020!1.02e-25!34;UBERON:0003056!1.18e-25!49;UBERON:0000955!2.29e-24!50;UBERON:0006238!2.29e-24!50;UBERON:0002616!1.93e-23!49;UBERON:0002791!1.59e-21!29;UBERON:0003528!1.59e-21!29;UBERON:0001893!1.59e-21!29;UBERON:0003080!5.16e-20!40;UBERON:0002780!1.49e-19!39;UBERON:0001890!1.49e-19!39;UBERON:0006240!1.49e-19!39;UBERON:0000956!7.73e-16!21;UBERON:0001869!7.73e-16!21;UBERON:0000203!7.73e-16!21;UBERON:0007811!3.06e-15!86;UBERON:0000153!2.14e-12!94;UBERON:0002619!3.00e-12!17;UBERON:0002021!1.33e-08!10;UBERON:0000411!1.33e-08!10;UBERON:0001950!1.33e-08!10;UBERON:0002420!7.79e-07!8;UBERON:0007245!7.79e-07!8;UBERON:0010009!7.79e-07!8;UBERON:0010011!7.79e-07!8;UBERON:0000454!7.79e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.08e-38,34;UBERON:0001017,4.27e-36,73;UBERON:0004121,4.59e-35,95;UBERON:0000924,4.59e-35,95;UBERON:0006601,4.59e-35,95;UBERON:0001016,8.01e-35,75;UBERON:0002346,6.33e-33,64;UBERON:0003075,6.33e-33,64;UBERON:0007284,6.33e-33,64;UBERON:0003528,4.09e-31,29;UBERON:0002791,4.09e-31,29;UBERON:0001893,4.09e-31,29;UBERON:0000073,4.02e-29,54;UBERON:0010371,1.58e-27,73;UBERON:0003056,4.72e-26,49;UBERON:0001049,1.88e-25,52;UBERON:0005068,1.88e-25,52;UBERON:0006241,1.88e-25,52;UBERON:0007135,1.88e-25,52;UBERON:0000956,3.79e-23,21;UBERON:0001869,3.79e-23,21;UBERON:0000203,3.79e-23,21;UBERON:0000955,2.57e-21,47;UBERON:0006238,2.57e-21,47;UBERON:0002780,2.98e-21,39;UBERON:0001890,2.98e-21,39;UBERON:0006240,2.98e-21,39;UBERON:0003080,1.54e-20,40;UBERON:0002616,5.24e-20,46;UBERON:0010314,1.27e-19,92;UBERON:0002619,5.70e-17,17;UBERON:0002021,4.64e-12,10;UBERON:0000411,4.64e-12,10;UBERON:0001950,4.64e-12,10;UBERON:0002420,6.38e-09,8;UBERON:0007245,6.38e-09,8;UBERON:0010009,6.38e-09,8;UBERON:0010011,6.38e-09,8;UBERON:0000454,6.38e-09,8;UBERON:0000369,1.95e-08,5;UBERON:0002435,1.95e-08,5;UBERON:0000204,1.95e-08,5;UBERON:0010082,1.95e-08,5;UBERON:0001948,2.62e-08,5;UBERON:0002315,2.62e-08,5;UBERON:0000025,5.55e-07,114;UBERON:0002240,7.77e-07,6;UBERON:0005174,7.77e-07,6;UBERON:0001137,7.77e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,0.659058548203415,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,5.26022798234954,8.99284664762456,11.4089652631112,0.338844532069132,0,0,0,0,0.599200221036809,0.384218305321555,10.1615820062308,9.58542162155004,9.88527318351495,3.14216082844184,3.3130281142742,8.45186514583183,8.33855597858656,11.0306254393203,1.10115880999389,1.0214987046815,1.0752457327937,4.2203612073662,3.47653045689157,2.6045668527838,1.3959149950069,0.56276261003168,1.22238598221448,2.35702868378934,2.56269025438385,4.10078780815661,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,1.67557365450764,0,0,0,0,0.599162557619291,1.37250180845588,10.0523481690292,2.08589184230732,1.79000820131231,0.62336413367868,0.811206315338788,0,0,0,0.210441855886474,0.130120442962704,2.98872735763515,3.24111833649629,2.86339153887859,4.01415344992834,3.58718416797579,3.09215691047105,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89260953707715,5.55684906848136,0,0,0,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0.321101179975584,0.35163505977661,0,0,0.94652465824877,2.34263246577983,1.50796378412959,1.19484398976276,0,0.283076530788832,1.61924280669958,0.584511715822624,3.95287777946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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:83866952..83866963,+ | |||
|id=chr13:83866952..83866963,+ | |||
|ontology_enrichment_celltype=CL:0000540!8.61e-22!33;CL:0000047!8.61e-22!33;CL:0000031!8.61e-22!33;CL:0000404!8.61e-22!33;CL:0000221!5.92e-21!44;CL:0000133!5.92e-21!44;CL:0002319!8.58e-21!43;CL:0000117!1.73e-19!23;CL:0000337!1.73e-19!23;CL:0000393!1.77e-16!39;CL:0000211!1.77e-16!39;CL:0000055!7.19e-16!50;CL:0002321!3.68e-08!70;CL:0000220!3.68e-08!70;CL:0002609!2.64e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.38e-31,23;CL:0000337,4.38e-31,23;CL:0000540,1.81e-30,33;CL:0000047,1.81e-30,33;CL:0000031,1.81e-30,33;CL:0000404,1.81e-30,33;CL:0002319,4.01e-25,43;CL:0000393,1.41e-24,39;CL:0000211,1.41e-24,39;CL:0000221,2.30e-24,44;CL:0000133,2.30e-24,44;CL:0002321,2.36e-12,70;CL:0002609,9.62e-12,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.98e-38!73;UBERON:0005743!7.98e-38!73;UBERON:0000073!3.82e-36!75;UBERON:0001016!3.82e-36!75;UBERON:0004121!2.52e-32!102;UBERON:0000924!2.52e-32!102;UBERON:0006601!2.52e-32!102;UBERON:0002346!8.94e-29!71;UBERON:0003075!8.94e-29!71;UBERON:0007284!8.94e-29!71;UBERON:0000033!5.18e-28!63;UBERON:0001049!3.49e-26!52;UBERON:0005068!3.49e-26!52;UBERON:0006241!3.49e-26!52;UBERON:0007135!3.49e-26!52;UBERON:0002020!1.02e-25!34;UBERON:0003056!1.18e-25!49;UBERON:0000955!2.29e-24!50;UBERON:0006238!2.29e-24!50;UBERON:0002616!1.93e-23!49;UBERON:0002791!1.59e-21!29;UBERON:0003528!1.59e-21!29;UBERON:0001893!1.59e-21!29;UBERON:0003080!5.16e-20!40;UBERON:0002780!1.49e-19!39;UBERON:0001890!1.49e-19!39;UBERON:0006240!1.49e-19!39;UBERON:0000956!7.73e-16!21;UBERON:0001869!7.73e-16!21;UBERON:0000203!7.73e-16!21;UBERON:0007811!3.06e-15!86;UBERON:0000153!2.14e-12!94;UBERON:0002619!3.00e-12!17;UBERON:0002021!1.33e-08!10;UBERON:0000411!1.33e-08!10;UBERON:0001950!1.33e-08!10;UBERON:0002420!7.79e-07!8;UBERON:0007245!7.79e-07!8;UBERON:0010009!7.79e-07!8;UBERON:0010011!7.79e-07!8;UBERON:0000454!7.79e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.08e-38,34;UBERON:0001017,4.27e-36,73;UBERON:0004121,4.59e-35,95;UBERON:0000924,4.59e-35,95;UBERON:0006601,4.59e-35,95;UBERON:0001016,8.01e-35,75;UBERON:0002346,6.33e-33,64;UBERON:0003075,6.33e-33,64;UBERON:0007284,6.33e-33,64;UBERON:0003528,4.09e-31,29;UBERON:0002791,4.09e-31,29;UBERON:0001893,4.09e-31,29;UBERON:0000073,4.02e-29,54;UBERON:0010371,1.58e-27,73;UBERON:0003056,4.72e-26,49;UBERON:0001049,1.88e-25,52;UBERON:0005068,1.88e-25,52;UBERON:0006241,1.88e-25,52;UBERON:0007135,1.88e-25,52;UBERON:0000956,3.79e-23,21;UBERON:0001869,3.79e-23,21;UBERON:0000203,3.79e-23,21;UBERON:0000955,2.57e-21,47;UBERON:0006238,2.57e-21,47;UBERON:0002780,2.98e-21,39;UBERON:0001890,2.98e-21,39;UBERON:0006240,2.98e-21,39;UBERON:0003080,1.54e-20,40;UBERON:0002616,5.24e-20,46;UBERON:0010314,1.27e-19,92;UBERON:0002619,5.70e-17,17;UBERON:0002021,4.64e-12,10;UBERON:0000411,4.64e-12,10;UBERON:0001950,4.64e-12,10;UBERON:0002420,6.38e-09,8;UBERON:0007245,6.38e-09,8;UBERON:0010009,6.38e-09,8;UBERON:0010011,6.38e-09,8;UBERON:0000454,6.38e-09,8;UBERON:0000369,1.95e-08,5;UBERON:0002435,1.95e-08,5;UBERON:0000204,1.95e-08,5;UBERON:0010082,1.95e-08,5;UBERON:0001948,2.62e-08,5;UBERON:0002315,2.62e-08,5;UBERON:0000025,5.55e-07,114;UBERON:0002240,7.77e-07,6;UBERON:0005174,7.77e-07,6;UBERON:0001137,7.77e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,0.659058548203415,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,5.26022798234954,8.99284664762456,11.4089652631112,0.338844532069132,0,0,0,0,0.599200221036809,0.384218305321555,10.1615820062308,9.58542162155004,9.88527318351495,3.14216082844184,3.3130281142742,8.45186514583183,8.33855597858656,11.0306254393203,1.10115880999389,1.0214987046815,1.0752457327937,4.2203612073662,3.47653045689157,2.6045668527838,1.3959149950069,0.56276261003168,1.22238598221448,2.35702868378934,2.56269025438385,4.10078780815661,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,1.67557365450764,0,0,0,0,0.599162557619291,1.37250180845588,10.0523481690292,2.08589184230732,1.79000820131231,0.62336413367868,0.811206315338788,0,0,0,0.210441855886474,0.130120442962704,2.98872735763515,3.24111833649629,2.86339153887859,4.01415344992834,3.58718416797579,3.09215691047105,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89260953707715,5.55684906848136,0,0,0,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0.321101179975584,0.35163505977661,0,0,0.94652465824877,2.34263246577983,1.50796378412959,1.19484398976276,0,0.283076530788832,1.61924280669958,0.584511715822624,3.95287777946523,4.4984984299053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0,0,0,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,0.460325236507177,6.87474616127276,3.09335728218638,2.74033007908257,2.2661816921691,4.05013500139084,2.70192721934532,1.81256963593682,3.62432218226274,1.45302286617847,3.59122386060928,2.04880326904961,0.243106717068294,0.628839487883947,0.735374033800057,0.888986911206461,1.03017528619447,0.320919209591815,0.505394423527595,0.50695859978048,0.377252682772152,0.655490552289177,0.320125762024346,0.459483751644906,0,0.347652977834566,0.578727661391115,0.412085900803307,0,0,0.532427418478012,0.953744759789284,1.0174249164263,0.846984423737976,0.592302255241736,0.365855945745545,0.789209134313529,0.814824683075171,0,0.711810108745045,0.591026894253381,0.818462086339379,0.464810523557898,0.192906610981141,2.24829520144151,0.233931608445408,0.429742108096597,0,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr13:83866952..83866963,+ | |||
}} |
Revision as of 01:11, 13 September 2013
Short description: | p@chr13:83866952..83866963, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:83866952..83866963, + |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.38e-31 | 23 |
neuroblast (sensu Vertebrata) | 4.38e-31 | 23 |
neuron | 1.81e-30 | 33 |
neuronal stem cell | 1.81e-30 | 33 |
neuroblast | 1.81e-30 | 33 |
electrically signaling cell | 1.81e-30 | 33 |
neural cell | 4.01e-25 | 43 |
electrically responsive cell | 1.41e-24 | 39 |
electrically active cell | 1.41e-24 | 39 |
ectodermal cell | 2.30e-24 | 44 |
neurectodermal cell | 2.30e-24 | 44 |
embryonic cell | 2.36e-12 | 70 |
neuron of cerebral cortex | 9.62e-12 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
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