FFCP PHASE1:Mm9::chr2:22629858..22629890,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=54519|HGNC=|MCL_coexpression_id=36|UniProt=B1AYC9,Q8R5A3,Q3TS23|association_with_transcript=11bp_to_NM_019456,uc008inl.2,uc008inm.2,uc008inn.2,uc008ino.2_5end|description=CAGE_peak_3_at_Apbb1ip_5end|id=chr2:22629858..22629890,+|ontology_enrichment_celltype=CL:0000988!1.79e-11!32;CL:0002032!1.79e-11!32;CL:0000037!1.79e-11!32;CL:0000566!1.79e-11!32;CL:0000837!1.79e-11!32;CL:0002031!7.04e-10!25;CL:0000838!1.57e-07!12;CL:0000738!2.00e-07!17;CL:0002087!2.00e-07!17;CL:0002320!2.21e-07!46;CL:0000134!2.21e-07!46;CL:0000084!4.67e-07!11;CL:0000827!4.67e-07!11|ontology_enrichment_celltype_v019_2=CL:0000988,7.07e-14,32;CL:0002032,7.07e-14,32;CL:0000037,7.07e-14,32;CL:0000837,7.07e-14,32;CL:0002031,6.85e-12,25;CL:0002320,6.99e-10,46;CL:0000134,6.99e-10,46;CL:0000838,1.18e-08,12;CL:0000738,1.22e-08,17;CL:0002087,1.22e-08,17;CL:0000084,4.29e-08,11;CL:0000827,4.29e-08,11;CL:0000049,1.32e-07,19;CL:0000542,1.45e-07,13;CL:0000051,1.45e-07,13;CL:0000791,2.89e-07,9;CL:0000789,2.89e-07,9;CL:0002420,2.89e-07,9;CL:0002419,2.89e-07,9;CL:0000790,2.89e-07,9;CL:0000219,3.81e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!9.93e-22!48;UBERON:0002390!1.39e-21!45;UBERON:0003061!1.39e-21!45;UBERON:0002405!3.52e-18!70;UBERON:0004177!2.29e-14!29;UBERON:0003081!1.78e-13!88;UBERON:0003408!8.78e-12!24;UBERON:0006562!1.54e-11!24;UBERON:0001557!1.54e-11!24;UBERON:0001042!1.54e-11!24;UBERON:0008814!1.54e-11!24;UBERON:0009145!1.54e-11!24;UBERON:0002370!1.61e-11!23;UBERON:0000974!1.61e-11!23;UBERON:0004807!1.61e-11!23;UBERON:0005058!1.61e-11!23;UBERON:0003351!1.61e-11!23;UBERON:0009113!1.61e-11!23;UBERON:0003295!1.61e-11!23;UBERON:0009722!1.61e-11!23;UBERON:0005562!1.61e-11!23;UBERON:0007690!1.61e-11!23;UBERON:0002204!4.02e-11!32;UBERON:0005057!7.19e-11!51;UBERON:0001474!2.08e-08!22;UBERON:0004765!2.08e-08!22;UBERON:0001434!2.08e-08!22;UBERON:0000072!3.04e-08!27;UBERON:0002371!6.63e-08!16;UBERON:0002368!1.42e-07!60;UBERON:0002384!2.21e-07!46;UBERON:0002530!2.57e-07!65;UBERON:0001004!7.00e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.97e-26,45;UBERON:0003061,6.97e-26,45;UBERON:0002193,1.26e-25,48;UBERON:0002405,1.26e-25,48;UBERON:0004177,2.74e-17,29;UBERON:0005057,2.74e-17,29;UBERON:0000077,2.31e-14,35;UBERON:0003408,3.30e-14,24;UBERON:0006562,6.53e-14,24;UBERON:0001557,6.53e-14,24;UBERON:0001042,6.53e-14,24;UBERON:0008814,6.53e-14,24;UBERON:0009145,6.53e-14,24;UBERON:0002370,6.72e-14,23;UBERON:0000974,6.72e-14,23;UBERON:0004807,6.72e-14,23;UBERON:0005058,6.72e-14,23;UBERON:0003351,6.72e-14,23;UBERON:0009113,6.72e-14,23;UBERON:0003295,6.72e-14,23;UBERON:0009722,6.72e-14,23;UBERON:0005562,6.72e-14,23;UBERON:0007690,6.72e-14,23;UBERON:0003081,6.76e-14,87;UBERON:0002204,4.05e-12,32;UBERON:0000072,4.06e-11,27;UBERON:0000926,5.15e-10,120;UBERON:0004120,5.15e-10,120;UBERON:0006603,5.15e-10,120;UBERON:0002384,6.99e-10,46;UBERON:0001474,2.84e-09,22;UBERON:0004765,2.84e-09,22;UBERON:0001434,2.84e-09,22;UBERON:0001004,4.08e-09,42;UBERON:0002371,4.25e-09,16;UBERON:0000065,8.56e-09,41;UBERON:0000490,4.82e-08,66;UBERON:0001041,6.30e-08,80;UBERON:0002368,7.83e-08,60;UBERON:0002530,9.35e-07,65|phase1_expression=0.160148847104794,0,0,0,0,0,0,15.8821687833139,6.19470377467334,7.0219357896598,6.8487187290202,7.97721589953364,22.5984963509192,21.5054189950734,6.99530499812892,7.28910962603373,5.59649502502517,14.0380663584416,13.1629856261509,9.76096199135469,1.10556277196391,6.15603897445489,4.70159620450084,1.27993938234725,0.68822784320151,0,0,0,0,0.504060259519861,0.221730510655305,1.27006134691926,1.23012957516914,0,0,0.166234645358492,0,20.0895182753716,10.9386948233332,20.4174260149781,25.2939539853336,20.4913645487534,20.8769451803396,2.89562681343828,2.63580021170738,3.30384153891027,3.12956537739216,0.436050312760893,0.219686182734472,0.388859798148567,0.139986421625363,0,7.88578248471361,17.4086914082723,14.452033363126,1.80081605225163,1.71920063963254,3.09403255366465,0,0,0,0.677689064138264,0,7.64914759689189,8.89979726310277,8.5257613793532,3.29560121570245,1.15265491596466,0.207379224616955,0.270011876663381,0,0,0,0.122490799214954,0.0958454710182364,0,0,0.766124028511126,0.307213066512487,0.131886287730194,0.365950574409639,0,0.558365998002762,0.56276261003168,1.22238598221448,0.294628585473668,0.711858403995515,0,0.151452386666368,0.0755715601067855,0,0,0,0,0.649776417447669,0,1.96622188184453,1.87473354835864,0.779358013808606,1.41335829804136,0.985903938436763,6.41632387071589,10.1922095882658,0,0,0,0,1.59857431606684,44.5373159873135,1.03909497345377,1.21439728736295,0.913396434936424,0.230615497256059,0.150722640552623,0.940709657085638,0.376999773989026,0,1.73519228303894,7.96149496754887,3.72063754879041,7.50861162765338,6.30337829075789,0,0,0.209446706813455,0.766371165625774,7.30872259486114,2.99951365496704,5.71816021828791,1.3481157546434,1.83000241127451,0.125654352112864,1.39059456153821,0.255715457330331,1.0389402227978,0.811206315338788,1.01839363850316,5.47390670684409,0.505445516867349,0.210441855886474,0.130120442962704,0.459804208866946,0.720248519221397,0.452114453507145,0.340182495756639,0.384341160854549,0.562210347358373,0.776110112217047,0.431135985865684,0,0.351902248327898,0.43839146485515,0.278047249225598,1.39300866608867,0.61734640922383,0.199034266818493,4.91549231119264,6.94839349209731,7.38825098428541,0.621377317606506,0.469052119962192,0,0,0,0.925602677324269,0.465067889500816,0.268273401399619,0.817357396570186,0.658239399653922,0.820837320395476,0.810688095458557,0.730999937126662,1.75640092232841,1.07365135008297,0.841159794256509,0.205809224758569,0,2.64450566663544,0.213288250535234,0,0.257734922644187,0.201683524623343,0.22237804384487,0.570676878337677,0.949058123089023,0.658795818896044,0.502670417600539,0.795825888164603,1.16978452271472,0,1.94524244887225,1.39398891278057,0.569003702859245,1.02823661348756,1.1270773567308,1.01825663922657,0.387904974335251,1.19230893813542,0.316182685621286,0,0.156998727841375,0.246794327843601,0.592905254174298,5.33904338291501,4.71741588271687,5.17182858485164,8.52012509831712,4.58236603529592,3.05551022137704,3.74004978686054,3.72911021582581,3.29473695825698,5.75072826109418,0.744281895337007,1.24815069245824,0.757736633841335,0.538192240565737,0.964887042726734,1.47802552133284,0.189491411770485,0.814824882210129,0.169745085775188,0,1.00503754465089,0.476087281772027,0.390267295715598,1.7339865851681,1.99318220683897,1.75400245523236,1.80249646187312,3.45369963731791,3.47157740595628,4.52373851817817,7.61467957346193,0.983528546038072,0.827810238914197,1.44495530989013,0.703270119553219,2.29508923527346,0.757412781613119,0,0.780877488593277,0,0,0,0,0.404810701674894,0.584511715822624,0.790575555893047,0.642642632843614,1.70328102249922,0.35613120733451,1.30309567482861,2.8044920905331,1.32745138339963,0.485561272309963,0.302323556964751,0,0.295301892880773,0.307435147943927,0.775284879504663,1.45413491791002,1.42598951353889,0.948110273807448,0,0,1.36175842301515,2.16073312837572,1.81102157295856,0.857348140126369,2.83744373827638,0.891844088010353,1.15184314421485,1.2178597964584,1.17335854031855,0.63549621259146,0.661585194164886,1.31909002353184,1.29171541356724,1.68876189798836,1.07435109602823,0.984845398470368,0.291480836629851,0.741701208042039,11.1066072518604,2.27025554759545,5.55583582109135,11.1137389632768,12.0290920394502,11.4389086603261,4.24946074984638,5.318155188299,3.45499934511059,0,0.632671987162271,0.203319467126849,0.540026704109006,0.418176592028937,0.218362563746178,0.134864346384821,0.578574190077352,1.04702376793612,1.29614973291793,3.10669656543463,0,0.149516546043979,0.330916980914195,0.777804753376191,0.129159823477731,0.168956125490778,0.352071715937262,1.0416350787516,0.838874755405687,0.724752362478018,0.576060012515731,21.1727450820879,2.02725215290164,3.3894615864393,5.45667456506739,13.4270021750611,11.5235185773134,12.3801313005568,13.7351260272357,17.5681622909777,11.964468644835,18.2495395097681,20.076323432389,19.6272156946272,19.6353195665036,1.58711268530648,0,0,0.503653849092235,1.54551675225752,2.064507229963,2.56412273974171,1.50057865355346,0.501572104035363,0.564751842617067,0,0.572895513439397,1.20297227640581,0.685082519770642,0,0,0.900642406448441,0.453142408984205,0,0.207574695168353,0.798049746802062,0.853668028770671,0.972426868273176,1.88651846365184,0.919217542250071,1.77797382241292,0.618105171716683,0.64183841918363,1.76888048234658,1.52087579934144,1.69763707247469,0.842773567228942,1.6646539625266,1.37845125493472,1.42888107384922,1.0429589335037,1.73618298417335,1.64834360321323,1.03039244094078,1.02860775715625,0.887379030796687,0.476872379894642,1.45346416632329,1.31753132581463,1.35383372626682,1.64635175585495,2.10455769150274,0.543216455383447,0.561142271657738,2.13543032623513,1.0835493061312,0.409231043169689,1.54936841185966,1.15743966588685,0.499621155875892,0.467863216890817,2.14871054048298,0.765153328275374,1.98532277207564,2.55054619182464|short_description=p3@Apbb1ip}} | ||
|EntrezGene=54519 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|UniProt=B1AYC9,Q8R5A3,Q3TS23 | |||
|association_with_transcript=11bp_to_NM_019456,uc008inl.2,uc008inm.2,uc008inn.2,uc008ino.2_5end | |||
|description=CAGE_peak_3_at_Apbb1ip_5end | |||
|id=chr2:22629858..22629890,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.79e-11!32;CL:0002032!1.79e-11!32;CL:0000037!1.79e-11!32;CL:0000566!1.79e-11!32;CL:0000837!1.79e-11!32;CL:0002031!7.04e-10!25;CL:0000838!1.57e-07!12;CL:0000738!2.00e-07!17;CL:0002087!2.00e-07!17;CL:0002320!2.21e-07!46;CL:0000134!2.21e-07!46;CL:0000084!4.67e-07!11;CL:0000827!4.67e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.07e-14,32;CL:0002032,7.07e-14,32;CL:0000037,7.07e-14,32;CL:0000837,7.07e-14,32;CL:0002031,6.85e-12,25;CL:0002320,6.99e-10,46;CL:0000134,6.99e-10,46;CL:0000838,1.18e-08,12;CL:0000738,1.22e-08,17;CL:0002087,1.22e-08,17;CL:0000084,4.29e-08,11;CL:0000827,4.29e-08,11;CL:0000049,1.32e-07,19;CL:0000542,1.45e-07,13;CL:0000051,1.45e-07,13;CL:0000791,2.89e-07,9;CL:0000789,2.89e-07,9;CL:0002420,2.89e-07,9;CL:0002419,2.89e-07,9;CL:0000790,2.89e-07,9;CL:0000219,3.81e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.93e-22!48;UBERON:0002390!1.39e-21!45;UBERON:0003061!1.39e-21!45;UBERON:0002405!3.52e-18!70;UBERON:0004177!2.29e-14!29;UBERON:0003081!1.78e-13!88;UBERON:0003408!8.78e-12!24;UBERON:0006562!1.54e-11!24;UBERON:0001557!1.54e-11!24;UBERON:0001042!1.54e-11!24;UBERON:0008814!1.54e-11!24;UBERON:0009145!1.54e-11!24;UBERON:0002370!1.61e-11!23;UBERON:0000974!1.61e-11!23;UBERON:0004807!1.61e-11!23;UBERON:0005058!1.61e-11!23;UBERON:0003351!1.61e-11!23;UBERON:0009113!1.61e-11!23;UBERON:0003295!1.61e-11!23;UBERON:0009722!1.61e-11!23;UBERON:0005562!1.61e-11!23;UBERON:0007690!1.61e-11!23;UBERON:0002204!4.02e-11!32;UBERON:0005057!7.19e-11!51;UBERON:0001474!2.08e-08!22;UBERON:0004765!2.08e-08!22;UBERON:0001434!2.08e-08!22;UBERON:0000072!3.04e-08!27;UBERON:0002371!6.63e-08!16;UBERON:0002368!1.42e-07!60;UBERON:0002384!2.21e-07!46;UBERON:0002530!2.57e-07!65;UBERON:0001004!7.00e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.97e-26,45;UBERON:0003061,6.97e-26,45;UBERON:0002193,1.26e-25,48;UBERON:0002405,1.26e-25,48;UBERON:0004177,2.74e-17,29;UBERON:0005057,2.74e-17,29;UBERON:0000077,2.31e-14,35;UBERON:0003408,3.30e-14,24;UBERON:0006562,6.53e-14,24;UBERON:0001557,6.53e-14,24;UBERON:0001042,6.53e-14,24;UBERON:0008814,6.53e-14,24;UBERON:0009145,6.53e-14,24;UBERON:0002370,6.72e-14,23;UBERON:0000974,6.72e-14,23;UBERON:0004807,6.72e-14,23;UBERON:0005058,6.72e-14,23;UBERON:0003351,6.72e-14,23;UBERON:0009113,6.72e-14,23;UBERON:0003295,6.72e-14,23;UBERON:0009722,6.72e-14,23;UBERON:0005562,6.72e-14,23;UBERON:0007690,6.72e-14,23;UBERON:0003081,6.76e-14,87;UBERON:0002204,4.05e-12,32;UBERON:0000072,4.06e-11,27;UBERON:0000926,5.15e-10,120;UBERON:0004120,5.15e-10,120;UBERON:0006603,5.15e-10,120;UBERON:0002384,6.99e-10,46;UBERON:0001474,2.84e-09,22;UBERON:0004765,2.84e-09,22;UBERON:0001434,2.84e-09,22;UBERON:0001004,4.08e-09,42;UBERON:0002371,4.25e-09,16;UBERON:0000065,8.56e-09,41;UBERON:0000490,4.82e-08,66;UBERON:0001041,6.30e-08,80;UBERON:0002368,7.83e-08,60;UBERON:0002530,9.35e-07,65 | |||
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| |||
|short_description=p3@Apbb1ip | |||
}} |
Revision as of 23:21, 13 September 2013
Short description: | p3@Apbb1ip |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Apbb1ip_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 11bp_to_NM_019456, uc008inl.2, uc008inm.2, uc008inn.2, uc008ino.2_5end |
EntrezGene: | Apbb1ip |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 7.07e-14 | 32 |
hematopoietic oligopotent progenitor cell | 7.07e-14 | 32 |
hematopoietic stem cell | 7.07e-14 | 32 |
hematopoietic multipotent progenitor cell | 7.07e-14 | 32 |
hematopoietic lineage restricted progenitor cell | 6.85e-12 | 25 |
connective tissue cell | 6.99e-10 | 46 |
mesenchymal cell | 6.99e-10 | 46 |
lymphoid lineage restricted progenitor cell | 1.18e-08 | 12 |
leukocyte | 1.22e-08 | 17 |
nongranular leukocyte | 1.22e-08 | 17 |
T cell | 4.29e-08 | 11 |
pro-T cell | 4.29e-08 | 11 |
common myeloid progenitor | 1.32e-07 | 19 |
lymphocyte | 1.45e-07 | 13 |
common lymphoid progenitor | 1.45e-07 | 13 |
mature alpha-beta T cell | 2.89e-07 | 9 |
alpha-beta T cell | 2.89e-07 | 9 |
immature T cell | 2.89e-07 | 9 |
mature T cell | 2.89e-07 | 9 |
immature alpha-beta T cell | 2.89e-07 | 9 |
motile cell | 3.81e-07 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.