FFCP PHASE1:Mm9::chr6:30755657..30755666,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=145|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:30755657..30755666,+|id=chr6:30755657..30755666,+|ontology_enrichment_celltype=CL:0000117!1.43e-13!23;CL:0000337!1.43e-13!23;CL:0000540!1.53e-07!33;CL:0000047!1.53e-07!33;CL:0000031!1.53e-07!33;CL:0000404!1.53e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.98e-14,23;CL:0000337,1.98e-14,23;CL:0002610,5.07e-12,3;CL:0002614,1.40e-11,3;CL:0000540,1.46e-09,33;CL:0000047,1.46e-09,33;CL:0000031,1.46e-09,33;CL:0000404,1.46e-09,33;CL:0000393,7.71e-08,39;CL:0000211,7.71e-08,39;CL:0002319,5.85e-07,43;CL:0000221,9.16e-07,44;CL:0000133,9.16e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.20e-19!52;UBERON:0005068!3.20e-19!52;UBERON:0006241!3.20e-19!52;UBERON:0007135!3.20e-19!52;UBERON:0000955!1.43e-17!50;UBERON:0006238!1.43e-17!50;UBERON:0002616!6.25e-17!49;UBERON:0002020!1.23e-16!34;UBERON:0001017!2.02e-16!73;UBERON:0005743!2.02e-16!73;UBERON:0000073!1.35e-15!75;UBERON:0001016!1.35e-15!75;UBERON:0000033!6.02e-15!63;UBERON:0002346!1.16e-14!71;UBERON:0003075!1.16e-14!71;UBERON:0007284!1.16e-14!71;UBERON:0003080!1.90e-12!40;UBERON:0002791!1.95e-12!29;UBERON:0003528!1.95e-12!29;UBERON:0001893!1.95e-12!29;UBERON:0004121!4.03e-12!102;UBERON:0000924!4.03e-12!102;UBERON:0006601!4.03e-12!102;UBERON:0003056!7.18e-12!49;UBERON:0002780!1.28e-11!39;UBERON:0001890!1.28e-11!39;UBERON:0006240!1.28e-11!39;UBERON:0000025!6.63e-09!114;UBERON:0007811!2.98e-08!86;UBERON:0003076!6.24e-08!12;UBERON:0003057!6.24e-08!12;UBERON:0002298!1.35e-07!6;UBERON:0000956!1.66e-07!21;UBERON:0001869!1.66e-07!21;UBERON:0000203!1.66e-07!21;UBERON:0004111!2.04e-07!122;UBERON:0002021!3.55e-07!10;UBERON:0000411!3.55e-07!10;UBERON:0001950!3.55e-07!10;UBERON:0002240!5.91e-07!6;UBERON:0005174!5.91e-07!6;UBERON:0001137!5.91e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.85e-27,54;UBERON:0001017,1.42e-23,73;UBERON:0001016,7.56e-23,75;UBERON:0001049,8.65e-23,52;UBERON:0005068,8.65e-23,52;UBERON:0006241,8.65e-23,52;UBERON:0007135,8.65e-23,52;UBERON:0002616,5.76e-18,46;UBERON:0002346,6.99e-18,64;UBERON:0003075,6.99e-18,64;UBERON:0007284,6.99e-18,64;UBERON:0000955,1.61e-17,47;UBERON:0006238,1.61e-17,47;UBERON:0004121,2.94e-17,95;UBERON:0000924,2.94e-17,95;UBERON:0006601,2.94e-17,95;UBERON:0002020,1.72e-16,34;UBERON:0003080,7.76e-16,40;UBERON:0010371,2.96e-15,73;UBERON:0002950,6.19e-15,4;UBERON:0001891,6.19e-15,4;UBERON:0009616,6.19e-15,4;UBERON:0010286,6.19e-15,4;UBERON:0002780,6.26e-14,39;UBERON:0001890,6.26e-14,39;UBERON:0006240,6.26e-14,39;UBERON:0003528,6.61e-14,29;UBERON:0002791,6.61e-14,29;UBERON:0001893,6.61e-14,29;UBERON:0002021,1.00e-13,10;UBERON:0000411,1.00e-13,10;UBERON:0001950,1.00e-13,10;UBERON:0003056,1.88e-12,49;UBERON:0004684,5.07e-12,3;UBERON:0002275,5.07e-12,3;UBERON:0002038,1.40e-11,3;UBERON:0009663,1.40e-11,3;UBERON:0009661,1.40e-11,3;UBERON:0000125,1.40e-11,3;UBERON:0002308,1.40e-11,3;UBERON:0010314,2.17e-11,92;UBERON:0002619,2.28e-10,17;UBERON:0000025,9.32e-10,114;UBERON:0004111,7.08e-09,122;UBERON:0001896,1.94e-08,2;UBERON:0002298,1.94e-08,2;UBERON:0005290,1.94e-08,2;UBERON:0010096,1.94e-08,2;UBERON:0000956,3.16e-08,21;UBERON:0001869,3.16e-08,21;UBERON:0000203,3.16e-08,21;UBERON:0003076,1.03e-07,12;UBERON:0003057,1.03e-07,12;UBERON:0002420,1.83e-07,8;UBERON:0007245,1.83e-07,8;UBERON:0010009,1.83e-07,8;UBERON:0010011,1.83e-07,8;UBERON:0000454,1.83e-07,8;UBERON:0011216,2.10e-07,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0,0,0,0,0,0,0,0,0,0.270011876663381,0.210324961351382,0.285650984403804,0.883474163806454,0,0.287536413054709,0,1.10115880999389,2.042997409363,4.76180253094355,0.659431438650969,1.37231465403614,0.52091337055676,1.3959149950069,1.12552522006336,2.75036845998258,5.00868595305235,1.13897344639282,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,1.49790639404823,0,0.753926112677186,0.869121600961382,0.767146371990992,1.24672826735736,1.46017136760982,0,0,0,0,0,0,0,0,0.0680364991513279,0.2562274405697,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308534225774757,0.232533944750408,0,0.233530684734339,0,0.492502392237286,0.243206428637567,0,0,0,0.420579897128254,1.23485534855141,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0.203651327845314,0.387904974335251,0.350679099451593,0.126473074248515,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0.486405680325106,0,4.31304619582064,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0.780534591431195,0.630540576424764,0,0.478364305972461,0.655453258862952,0,0,0,0,0,0,1.44495530989013,1.99259867206745,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=145 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:30755657..30755666,+ | |||
|id=chr6:30755657..30755666,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.43e-13!23;CL:0000337!1.43e-13!23;CL:0000540!1.53e-07!33;CL:0000047!1.53e-07!33;CL:0000031!1.53e-07!33;CL:0000404!1.53e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.98e-14,23;CL:0000337,1.98e-14,23;CL:0002610,5.07e-12,3;CL:0002614,1.40e-11,3;CL:0000540,1.46e-09,33;CL:0000047,1.46e-09,33;CL:0000031,1.46e-09,33;CL:0000404,1.46e-09,33;CL:0000393,7.71e-08,39;CL:0000211,7.71e-08,39;CL:0002319,5.85e-07,43;CL:0000221,9.16e-07,44;CL:0000133,9.16e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.20e-19!52;UBERON:0005068!3.20e-19!52;UBERON:0006241!3.20e-19!52;UBERON:0007135!3.20e-19!52;UBERON:0000955!1.43e-17!50;UBERON:0006238!1.43e-17!50;UBERON:0002616!6.25e-17!49;UBERON:0002020!1.23e-16!34;UBERON:0001017!2.02e-16!73;UBERON:0005743!2.02e-16!73;UBERON:0000073!1.35e-15!75;UBERON:0001016!1.35e-15!75;UBERON:0000033!6.02e-15!63;UBERON:0002346!1.16e-14!71;UBERON:0003075!1.16e-14!71;UBERON:0007284!1.16e-14!71;UBERON:0003080!1.90e-12!40;UBERON:0002791!1.95e-12!29;UBERON:0003528!1.95e-12!29;UBERON:0001893!1.95e-12!29;UBERON:0004121!4.03e-12!102;UBERON:0000924!4.03e-12!102;UBERON:0006601!4.03e-12!102;UBERON:0003056!7.18e-12!49;UBERON:0002780!1.28e-11!39;UBERON:0001890!1.28e-11!39;UBERON:0006240!1.28e-11!39;UBERON:0000025!6.63e-09!114;UBERON:0007811!2.98e-08!86;UBERON:0003076!6.24e-08!12;UBERON:0003057!6.24e-08!12;UBERON:0002298!1.35e-07!6;UBERON:0000956!1.66e-07!21;UBERON:0001869!1.66e-07!21;UBERON:0000203!1.66e-07!21;UBERON:0004111!2.04e-07!122;UBERON:0002021!3.55e-07!10;UBERON:0000411!3.55e-07!10;UBERON:0001950!3.55e-07!10;UBERON:0002240!5.91e-07!6;UBERON:0005174!5.91e-07!6;UBERON:0001137!5.91e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.85e-27,54;UBERON:0001017,1.42e-23,73;UBERON:0001016,7.56e-23,75;UBERON:0001049,8.65e-23,52;UBERON:0005068,8.65e-23,52;UBERON:0006241,8.65e-23,52;UBERON:0007135,8.65e-23,52;UBERON:0002616,5.76e-18,46;UBERON:0002346,6.99e-18,64;UBERON:0003075,6.99e-18,64;UBERON:0007284,6.99e-18,64;UBERON:0000955,1.61e-17,47;UBERON:0006238,1.61e-17,47;UBERON:0004121,2.94e-17,95;UBERON:0000924,2.94e-17,95;UBERON:0006601,2.94e-17,95;UBERON:0002020,1.72e-16,34;UBERON:0003080,7.76e-16,40;UBERON:0010371,2.96e-15,73;UBERON:0002950,6.19e-15,4;UBERON:0001891,6.19e-15,4;UBERON:0009616,6.19e-15,4;UBERON:0010286,6.19e-15,4;UBERON:0002780,6.26e-14,39;UBERON:0001890,6.26e-14,39;UBERON:0006240,6.26e-14,39;UBERON:0003528,6.61e-14,29;UBERON:0002791,6.61e-14,29;UBERON:0001893,6.61e-14,29;UBERON:0002021,1.00e-13,10;UBERON:0000411,1.00e-13,10;UBERON:0001950,1.00e-13,10;UBERON:0003056,1.88e-12,49;UBERON:0004684,5.07e-12,3;UBERON:0002275,5.07e-12,3;UBERON:0002038,1.40e-11,3;UBERON:0009663,1.40e-11,3;UBERON:0009661,1.40e-11,3;UBERON:0000125,1.40e-11,3;UBERON:0002308,1.40e-11,3;UBERON:0010314,2.17e-11,92;UBERON:0002619,2.28e-10,17;UBERON:0000025,9.32e-10,114;UBERON:0004111,7.08e-09,122;UBERON:0001896,1.94e-08,2;UBERON:0002298,1.94e-08,2;UBERON:0005290,1.94e-08,2;UBERON:0010096,1.94e-08,2;UBERON:0000956,3.16e-08,21;UBERON:0001869,3.16e-08,21;UBERON:0000203,3.16e-08,21;UBERON:0003076,1.03e-07,12;UBERON:0003057,1.03e-07,12;UBERON:0002420,1.83e-07,8;UBERON:0007245,1.83e-07,8;UBERON:0010009,1.83e-07,8;UBERON:0010011,1.83e-07,8;UBERON:0000454,1.83e-07,8;UBERON:0011216,2.10e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0,0,0,0,0,0,0,0,0,0.270011876663381,0.210324961351382,0.285650984403804,0.883474163806454,0,0.287536413054709,0,1.10115880999389,2.042997409363,4.76180253094355,0.659431438650969,1.37231465403614,0.52091337055676,1.3959149950069,1.12552522006336,2.75036845998258,5.00868595305235,1.13897344639282,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,1.49790639404823,0,0.753926112677186,0.869121600961382,0.767146371990992,1.24672826735736,1.46017136760982,0,0,0,0,0,0,0,0,0.0680364991513279,0.2562274405697,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308534225774757,0.232533944750408,0,0.233530684734339,0,0.492502392237286,0.243206428637567,0,0,0,0.420579897128254,1.23485534855141,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0.203651327845314,0.387904974335251,0.350679099451593,0.126473074248515,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0.486405680325106,0,4.31304619582064,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0.780534591431195,0.630540576424764,0,0.478364305972461,0.655453258862952,0,0,0,0,0,0,1.44495530989013,1.99259867206745,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0.322928853391811,0,0.119372344003136,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,4.51801474093653,0.920650473014354,4.01026859407578,1.89038500578056,0,3.0215755895588,0,0.45032120322422,1.81256963593682,2.5888015587591,0,0,0,0.729320151204882,0.209613162627982,0,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.231768651889711,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0.887379030796687,0.238436189947321,0,0.376437521661322,0.25384382367503,0,0.526139422875686,0,0,0.118635018124174,0.29551344712669,0.409231043169689,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p@chr6:30755657..30755666,+ | |||
}} |
Revision as of 09:37, 14 September 2013
Short description: | p@chr6:30755657..30755666, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:30755657..30755666, + |
Coexpression cluster: | MCL_coexpression_mm9:145 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.98e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.98e-14 | 23 |
raphe nuclei neuron | 5.07e-12 | 3 |
neuron of the substantia nigra | 1.40e-11 | 3 |
neuron | 1.46e-09 | 33 |
neuronal stem cell | 1.46e-09 | 33 |
neuroblast | 1.46e-09 | 33 |
electrically signaling cell | 1.46e-09 | 33 |
electrically responsive cell | 7.71e-08 | 39 |
electrically active cell | 7.71e-08 | 39 |
neural cell | 5.85e-07 | 43 |
ectodermal cell | 9.16e-07 | 44 |
neurectodermal cell | 9.16e-07 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.