FFCP PHASE1:Mm9::chr3:114606980..114607060,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=229759|HGNC=|MCL_coexpression_id=39|UniProt=P63056|association_with_transcript=0bp_to_ENSMUST00000081752_5end|description=CAGE_peak_1_at_Olfm3_5end|id=chr3:114606980..114607060,+|ontology_enrichment_celltype=CL:0000117!1.63e-14!23;CL:0000337!1.63e-14!23;CL:0000540!3.31e-10!33;CL:0000047!3.31e-10!33;CL:0000031!3.31e-10!33;CL:0000404!3.31e-10!33;CL:0000393!2.09e-07!39;CL:0000211!2.09e-07!39;CL:0002319!4.47e-07!43;CL:0000221!9.74e-07!44;CL:0000133!9.74e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.34e-20,23;CL:0000337,1.34e-20,23;CL:0000540,7.26e-13,33;CL:0000047,7.26e-13,33;CL:0000031,7.26e-13,33;CL:0000404,7.26e-13,33;CL:0000393,3.67e-10,39;CL:0000211,3.67e-10,39;CL:0002319,8.62e-09,43;CL:0000221,1.73e-08,44;CL:0000133,1.73e-08,44;CL:0002610,8.15e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.87e-29!71;UBERON:0003075!2.87e-29!71;UBERON:0007284!2.87e-29!71;UBERON:0001049!4.73e-27!52;UBERON:0005068!4.73e-27!52;UBERON:0006241!4.73e-27!52;UBERON:0007135!4.73e-27!52;UBERON:0001017!4.79e-26!73;UBERON:0005743!4.79e-26!73;UBERON:0000073!1.24e-25!75;UBERON:0001016!1.24e-25!75;UBERON:0000955!2.11e-25!50;UBERON:0006238!2.11e-25!50;UBERON:0002616!1.18e-24!49;UBERON:0000033!3.32e-24!63;UBERON:0004121!3.72e-23!102;UBERON:0000924!3.72e-23!102;UBERON:0006601!3.72e-23!102;UBERON:0002020!9.04e-21!34;UBERON:0003056!3.36e-20!49;UBERON:0003080!1.13e-19!40;UBERON:0002780!9.29e-19!39;UBERON:0001890!9.29e-19!39;UBERON:0006240!9.29e-19!39;UBERON:0002791!1.94e-16!29;UBERON:0003528!1.94e-16!29;UBERON:0001893!1.94e-16!29;UBERON:0007811!2.17e-15!86;UBERON:0000153!1.48e-12!94;UBERON:0002619!3.15e-11!17;UBERON:0000956!1.99e-10!21;UBERON:0001869!1.99e-10!21;UBERON:0000203!1.99e-10!21;UBERON:0002021!1.00e-09!10;UBERON:0000411!1.00e-09!10;UBERON:0001950!1.00e-09!10;UBERON:0003076!7.15e-08!12;UBERON:0003057!7.15e-08!12;UBERON:0002420!1.63e-07!8;UBERON:0007245!1.63e-07!8;UBERON:0010009!1.63e-07!8;UBERON:0010011!1.63e-07!8;UBERON:0000454!1.63e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.43e-38,54;UBERON:0001049,1.68e-34,52;UBERON:0005068,1.68e-34,52;UBERON:0006241,1.68e-34,52;UBERON:0007135,1.68e-34,52;UBERON:0001017,2.19e-34,73;UBERON:0001016,3.52e-33,75;UBERON:0002020,7.77e-29,34;UBERON:0002346,6.41e-28,64;UBERON:0003075,6.41e-28,64;UBERON:0007284,6.41e-28,64;UBERON:0000955,5.38e-27,47;UBERON:0006238,5.38e-27,47;UBERON:0002616,8.36e-26,46;UBERON:0004121,2.72e-25,95;UBERON:0000924,2.72e-25,95;UBERON:0006601,2.72e-25,95;UBERON:0010371,2.83e-23,73;UBERON:0003528,2.01e-21,29;UBERON:0002791,2.01e-21,29;UBERON:0001893,2.01e-21,29;UBERON:0003080,2.05e-21,40;UBERON:0002780,5.41e-20,39;UBERON:0001890,5.41e-20,39;UBERON:0006240,5.41e-20,39;UBERON:0003056,1.13e-17,49;UBERON:0010314,1.78e-16,92;UBERON:0002021,1.92e-16,10;UBERON:0000411,1.92e-16,10;UBERON:0001950,1.92e-16,10;UBERON:0003076,5.34e-14,12;UBERON:0003057,5.34e-14,12;UBERON:0002420,2.02e-12,8;UBERON:0007245,2.02e-12,8;UBERON:0010009,2.02e-12,8;UBERON:0010011,2.02e-12,8;UBERON:0000454,2.02e-12,8;UBERON:0002619,2.12e-12,17;UBERON:0000956,1.98e-11,21;UBERON:0001869,1.98e-11,21;UBERON:0000203,1.98e-11,21;UBERON:0000025,1.24e-10,114;UBERON:0002240,1.30e-10,6;UBERON:0005174,1.30e-10,6;UBERON:0001137,1.30e-10,6;UBERON:0004111,2.38e-09,122;UBERON:0001948,3.62e-09,5;UBERON:0002315,3.62e-09,5;UBERON:0002950,5.99e-08,4;UBERON:0001891,5.99e-08,4;UBERON:0009616,5.99e-08,4;UBERON:0010286,5.99e-08,4;UBERON:0000369,9.43e-08,5;UBERON:0002435,9.43e-08,5;UBERON:0000204,9.43e-08,5;UBERON:0010082,9.43e-08,5;UBERON:0004684,8.15e-07,3;UBERON:0002275,8.15e-07,3|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67738095830884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,4.04632921719196,4.7609188134483,3.1691570175309,0,0,0,0,0,0,0,0.103689612308478,0,0,6.56997264128748,5.96345060569357,0.61245399607477,0.862609239164127,1.83843757322004,13.2139057199266,13.0241084846891,16.7431121249305,3.03338461779446,2.19570344645783,2.08365348222704,8.65467296904281,11.8180148106653,10.8486755921535,17.9723437138937,11.6744778255264,7.26957838718672,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0.29688427812965,0.520455980298408,0,0.230615497256059,0.452167921657868,0.352766121407114,0.251333182659351,0,0.144599356919912,0,0,0,0,0,33.0842300623048,47.1255090330274,0,0,0,0,12.1330417917906,5.03250663100489,5.15182843662744,12.5153510538439,13.2972037811772,15.1685272528479,13.9527486238272,0,0,0,0.841767423545896,0.520481771850815,0,0,0.30140963567143,0.340182495756639,0,0.937017245597288,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.22477654945064,11.2523219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| ||
|EntrezGene=229759 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|UniProt=P63056 | |||
|association_with_transcript=0bp_to_ENSMUST00000081752_5end | |||
|description=CAGE_peak_1_at_Olfm3_5end | |||
|id=chr3:114606980..114607060,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.63e-14!23;CL:0000337!1.63e-14!23;CL:0000540!3.31e-10!33;CL:0000047!3.31e-10!33;CL:0000031!3.31e-10!33;CL:0000404!3.31e-10!33;CL:0000393!2.09e-07!39;CL:0000211!2.09e-07!39;CL:0002319!4.47e-07!43;CL:0000221!9.74e-07!44;CL:0000133!9.74e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.34e-20,23;CL:0000337,1.34e-20,23;CL:0000540,7.26e-13,33;CL:0000047,7.26e-13,33;CL:0000031,7.26e-13,33;CL:0000404,7.26e-13,33;CL:0000393,3.67e-10,39;CL:0000211,3.67e-10,39;CL:0002319,8.62e-09,43;CL:0000221,1.73e-08,44;CL:0000133,1.73e-08,44;CL:0002610,8.15e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.87e-29!71;UBERON:0003075!2.87e-29!71;UBERON:0007284!2.87e-29!71;UBERON:0001049!4.73e-27!52;UBERON:0005068!4.73e-27!52;UBERON:0006241!4.73e-27!52;UBERON:0007135!4.73e-27!52;UBERON:0001017!4.79e-26!73;UBERON:0005743!4.79e-26!73;UBERON:0000073!1.24e-25!75;UBERON:0001016!1.24e-25!75;UBERON:0000955!2.11e-25!50;UBERON:0006238!2.11e-25!50;UBERON:0002616!1.18e-24!49;UBERON:0000033!3.32e-24!63;UBERON:0004121!3.72e-23!102;UBERON:0000924!3.72e-23!102;UBERON:0006601!3.72e-23!102;UBERON:0002020!9.04e-21!34;UBERON:0003056!3.36e-20!49;UBERON:0003080!1.13e-19!40;UBERON:0002780!9.29e-19!39;UBERON:0001890!9.29e-19!39;UBERON:0006240!9.29e-19!39;UBERON:0002791!1.94e-16!29;UBERON:0003528!1.94e-16!29;UBERON:0001893!1.94e-16!29;UBERON:0007811!2.17e-15!86;UBERON:0000153!1.48e-12!94;UBERON:0002619!3.15e-11!17;UBERON:0000956!1.99e-10!21;UBERON:0001869!1.99e-10!21;UBERON:0000203!1.99e-10!21;UBERON:0002021!1.00e-09!10;UBERON:0000411!1.00e-09!10;UBERON:0001950!1.00e-09!10;UBERON:0003076!7.15e-08!12;UBERON:0003057!7.15e-08!12;UBERON:0002420!1.63e-07!8;UBERON:0007245!1.63e-07!8;UBERON:0010009!1.63e-07!8;UBERON:0010011!1.63e-07!8;UBERON:0000454!1.63e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.43e-38,54;UBERON:0001049,1.68e-34,52;UBERON:0005068,1.68e-34,52;UBERON:0006241,1.68e-34,52;UBERON:0007135,1.68e-34,52;UBERON:0001017,2.19e-34,73;UBERON:0001016,3.52e-33,75;UBERON:0002020,7.77e-29,34;UBERON:0002346,6.41e-28,64;UBERON:0003075,6.41e-28,64;UBERON:0007284,6.41e-28,64;UBERON:0000955,5.38e-27,47;UBERON:0006238,5.38e-27,47;UBERON:0002616,8.36e-26,46;UBERON:0004121,2.72e-25,95;UBERON:0000924,2.72e-25,95;UBERON:0006601,2.72e-25,95;UBERON:0010371,2.83e-23,73;UBERON:0003528,2.01e-21,29;UBERON:0002791,2.01e-21,29;UBERON:0001893,2.01e-21,29;UBERON:0003080,2.05e-21,40;UBERON:0002780,5.41e-20,39;UBERON:0001890,5.41e-20,39;UBERON:0006240,5.41e-20,39;UBERON:0003056,1.13e-17,49;UBERON:0010314,1.78e-16,92;UBERON:0002021,1.92e-16,10;UBERON:0000411,1.92e-16,10;UBERON:0001950,1.92e-16,10;UBERON:0003076,5.34e-14,12;UBERON:0003057,5.34e-14,12;UBERON:0002420,2.02e-12,8;UBERON:0007245,2.02e-12,8;UBERON:0010009,2.02e-12,8;UBERON:0010011,2.02e-12,8;UBERON:0000454,2.02e-12,8;UBERON:0002619,2.12e-12,17;UBERON:0000956,1.98e-11,21;UBERON:0001869,1.98e-11,21;UBERON:0000203,1.98e-11,21;UBERON:0000025,1.24e-10,114;UBERON:0002240,1.30e-10,6;UBERON:0005174,1.30e-10,6;UBERON:0001137,1.30e-10,6;UBERON:0004111,2.38e-09,122;UBERON:0001948,3.62e-09,5;UBERON:0002315,3.62e-09,5;UBERON:0002950,5.99e-08,4;UBERON:0001891,5.99e-08,4;UBERON:0009616,5.99e-08,4;UBERON:0010286,5.99e-08,4;UBERON:0000369,9.43e-08,5;UBERON:0002435,9.43e-08,5;UBERON:0000204,9.43e-08,5;UBERON:0010082,9.43e-08,5;UBERON:0004684,8.15e-07,3;UBERON:0002275,8.15e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67738095830884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,4.04632921719196,4.7609188134483,3.1691570175309,0,0,0,0,0,0,0,0.103689612308478,0,0,6.56997264128748,5.96345060569357,0.61245399607477,0.862609239164127,1.83843757322004,13.2139057199266,13.0241084846891,16.7431121249305,3.03338461779446,2.19570344645783,2.08365348222704,8.65467296904281,11.8180148106653,10.8486755921535,17.9723437138937,11.6744778255264,7.26957838718672,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0.29688427812965,0.520455980298408,0,0.230615497256059,0.452167921657868,0.352766121407114,0.251333182659351,0,0.144599356919912,0,0,0,0,0,33.0842300623048,47.1255090330274,0,0,0,0,12.1330417917906,5.03250663100489,5.15182843662744,12.5153510538439,13.2972037811772,15.1685272528479,13.9527486238272,0,0,0,0.841767423545896,0.520481771850815,0,0,0.30140963567143,0.340182495756639,0,0.937017245597288,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.22477654945064,11.2523219128515,0,0,0.315508219416257,0.390438744296638,0,0,0,0,0,0,0,2.89189184779626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0.18006109403131,0,0.428674070063185,0.354680467284547,0.178368817602071,0.658196082408484,0,0,0,0.220528398054962,0,0,0,0,0,0,7.78786268444141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.201652370273681,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,7.34177395402186,5.06357760157895,9.16632821503035,8.93636548187176,8.90607275701835,11.3309084608455,10.8003600037089,9.00642406448441,9.5159905886683,5.69536342927002,0,0.798049746802062,0.170733605754134,1.21553358534147,0.419226325255965,0.183843508450014,0.666740183404846,1.23621034343337,0.64183841918363,0.758091635291392,0.50695859978048,1.32038438970253,1.31098110457835,0.704276676453562,0.918967503289812,0.476293691283074,1.0429589335037,1.35036454324594,0.824171801606613,0.588795680537589,1.02860775715625,0.887379030796687,0.238436189947321,0.872078499793971,1.2234219453993,0.930760686808441,0.548783918618318,1.05227884575137,0.950628796921032,0,0.949080144993393,0.985044823755635,0,0.77468420592983,0.385813221962283,0.999242311751784,0.935726433781634,1.93383948643468,0.57386499620653,0.661774257358546,0.231867835620421 | |||
|short_description=p1@Olfm3 | |||
}} |
Revision as of 01:17, 14 September 2013
Short description: | p1@Olfm3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Olfm3_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | 0bp_to_ENSMUST00000081752_5end |
EntrezGene: | Olfm3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.34e-20 | 23 |
neuroblast (sensu Vertebrata) | 1.34e-20 | 23 |
neuron | 7.26e-13 | 33 |
neuronal stem cell | 7.26e-13 | 33 |
neuroblast | 7.26e-13 | 33 |
electrically signaling cell | 7.26e-13 | 33 |
electrically responsive cell | 3.67e-10 | 39 |
electrically active cell | 3.67e-10 | 39 |
neural cell | 8.62e-09 | 43 |
ectodermal cell | 1.73e-08 | 44 |
neurectodermal cell | 1.73e-08 | 44 |
raphe nuclei neuron | 8.15e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.