FFCP PHASE1:Mm9::chr5:151062388..151062404,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=320365|HGNC=|MCL_coexpression_id=13|UniProt=E9PVT7,E9Q8I9,Q4VA57,Q8BIX6,Q8BUA0|association_with_transcript=-100bp_to_ENSMUST00000052630,ENSMUST00000087204,NM_172887,uc009atv.2_5end|description=CAGE_peak_6_at_Fry_5end|id=chr5:151062388..151062404,+|ontology_enrichment_celltype=CL:0000117!3.95e-15!23;CL:0000337!3.95e-15!23;CL:0000540!5.70e-14!33;CL:0000047!5.70e-14!33;CL:0000031!5.70e-14!33;CL:0000404!5.70e-14!33;CL:0000393!1.55e-09!39;CL:0000211!1.55e-09!39;CL:0000221!7.07e-08!44;CL:0000133!7.07e-08!44;CL:0002319!9.62e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,4.31e-28,23;CL:0000337,4.31e-28,23;CL:0000540,1.08e-20,33;CL:0000047,1.08e-20,33;CL:0000031,1.08e-20,33;CL:0000404,1.08e-20,33;CL:0000393,2.45e-16,39;CL:0000211,2.45e-16,39;CL:0002319,3.96e-14,43;CL:0000221,1.22e-13,44;CL:0000133,1.22e-13,44;CL:0002609,2.82e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.37e-23!73;UBERON:0005743!4.37e-23!73;UBERON:0004121!1.35e-22!102;UBERON:0000924!1.35e-22!102;UBERON:0006601!1.35e-22!102;UBERON:0000073!4.19e-22!75;UBERON:0001016!4.19e-22!75;UBERON:0001049!1.15e-21!52;UBERON:0005068!1.15e-21!52;UBERON:0006241!1.15e-21!52;UBERON:0007135!1.15e-21!52;UBERON:0000955!1.82e-20!50;UBERON:0006238!1.82e-20!50;UBERON:0000033!8.01e-20!63;UBERON:0002616!9.45e-20!49;UBERON:0002020!1.73e-19!34;UBERON:0002346!2.16e-19!71;UBERON:0003075!2.16e-19!71;UBERON:0007284!2.16e-19!71;UBERON:0003080!7.18e-18!40;UBERON:0002780!2.19e-17!39;UBERON:0001890!2.19e-17!39;UBERON:0006240!2.19e-17!39;UBERON:0002791!1.47e-16!29;UBERON:0003528!1.47e-16!29;UBERON:0001893!1.47e-16!29;UBERON:0003056!5.09e-16!49;UBERON:0000956!1.04e-11!21;UBERON:0001869!1.04e-11!21;UBERON:0000203!1.04e-11!21;UBERON:0002619!3.51e-09!17;UBERON:0000153!7.76e-09!94;UBERON:0007811!1.14e-08!86;UBERON:0002021!7.60e-08!10;UBERON:0000411!7.60e-08!10;UBERON:0001950!7.60e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.15e-38,34;UBERON:0000073,2.82e-38,54;UBERON:0001017,3.85e-37,73;UBERON:0001049,4.05e-36,52;UBERON:0005068,4.05e-36,52;UBERON:0006241,4.05e-36,52;UBERON:0007135,4.05e-36,52;UBERON:0001016,9.06e-36,75;UBERON:0003528,1.30e-32,29;UBERON:0002791,1.30e-32,29;UBERON:0001893,1.30e-32,29;UBERON:0000955,1.18e-30,47;UBERON:0006238,1.18e-30,47;UBERON:0004121,2.00e-30,95;UBERON:0000924,2.00e-30,95;UBERON:0006601,2.00e-30,95;UBERON:0002616,2.45e-29,46;UBERON:0003080,1.19e-28,40;UBERON:0002780,1.01e-27,39;UBERON:0001890,1.01e-27,39;UBERON:0006240,1.01e-27,39;UBERON:0002346,4.83e-27,64;UBERON:0003075,4.83e-27,64;UBERON:0007284,4.83e-27,64;UBERON:0010371,1.11e-24,73;UBERON:0000956,4.97e-23,21;UBERON:0001869,4.97e-23,21;UBERON:0000203,4.97e-23,21;UBERON:0003056,1.41e-21,49;UBERON:0002619,4.96e-18,17;UBERON:0010314,4.25e-17,92;UBERON:0002021,7.70e-14,10;UBERON:0000411,7.70e-14,10;UBERON:0001950,7.70e-14,10;UBERON:0004111,8.43e-11,122;UBERON:0000025,8.56e-11,114;UBERON:0002420,1.76e-10,8;UBERON:0007245,1.76e-10,8;UBERON:0010009,1.76e-10,8;UBERON:0010011,1.76e-10,8;UBERON:0000454,1.76e-10,8;UBERON:0002240,1.03e-07,6;UBERON:0005174,1.03e-07,6;UBERON:0001137,1.03e-07,6;UBERON:0003076,1.06e-07,12;UBERON:0003057,1.06e-07,12;UBERON:0000369,3.34e-07,5;UBERON:0002435,3.34e-07,5;UBERON:0000204,3.34e-07,5;UBERON:0010082,3.34e-07,5;UBERON:0001948,9.92e-07,5;UBERON:0002315,9.92e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45096213891115,3.70293685490423,4.43681982454325,0,0,0,0,0,0,0,2.07379224616955,3.51015439662396,2.73422449756797,1.99955689082663,1.54607978666129,4.89963196859816,4.98396449294829,6.43453150627015,2.20231761998777,2.42605942361857,1.22885226604995,2.63772575460388,4.66586982372289,1.04182674111352,1.67509799400829,2.8138130501584,3.0559649555362,2.06240009831567,3.70166370077668,2.23679334990361,0.075726193333184,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0.304465478312141,0.691846491768175,0.301445281105245,0.705532242814229,0.125666591329675,0,0.289198713839823,0,0.323533699894818,0,0,0,2.63502717310392,3.35114730901528,0,0,0,0,1.3481157546434,2.28750301409313,9.67538511269056,5.38855392596057,5.37002460393694,2.49345653471472,2.27137768294861,0.509196819251581,0.124406970610093,0.252722758433675,0,0.130120442962704,0.229902104433473,0.180062129805349,0.30140963567143,0.408218994907967,0.12811372028485,0.281105173679186,0.258703370739016,0,0.756424320671277,0.175951124163949,0.219195732427575,0,1.0447564995665,0.61734640922383,0.398068533636986,0,0,0,1.24275463521301,0.469052119962192,0.36012412292203,0,0,0.308534225774757,0,0.268273401399619,0.233530684734339,0,0.32833492815819,0.243206428637567,0.292399974850665,0.439100230582101,0.134206418760372,5.46753866266731,4.01327988279209,0,0,0.213288250535234,0.464473343720877,0,0.403367049246685,0.667134131534611,0.190225626112559,0,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0,0.771494018793504,0.442655759869801,0.885660887877613,0.156998727841375,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.642202359951168,1.52375192569864,0,0,0.94652465824877,0,0.430846795465598,0,0.222798674082394,0.849229592366497,1.21443210502468,1.46127928955656,0.395287777946524,3.85585579706168,0.141940085208269,0.178065603667255,0.325773918707152,0.164970122972535,1.32745138339963,0,0.604647113929502,0,0.590603785761546,0.614870295887855,0.775284879504663,0,0.712994756769443,0.316036757935816,0,1.03135543248187,1.36175842301515,0.36012218806262,0.129358683782755,0,0.354680467284547,0.535106452806212,0.658196082408484,0.913394847343798,0,0.21183207086382,0.661585194164886,0.8244312647074,1.13025098687134,1.08563264870681,0.716234064018819,0.820704498725306,0,2.03967832211561,0,0.412773735926445,0.185194527369712,0,0,0,0,0.279902904647316,0,0,0.158167996790568,0.813277868507395,0.216010681643603,0,0,0.134864346384821,0.41326727862668,0,0,2.4853572523477,0,0,0.165458490457098,0.194451188344048,0,0.675824501963113,0.117357238645754,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0,0,1.13365191807606,0,0,0,0.19318959403219,0.187682475451182,0,0.214368379079066,0,3.3885110557024,1.84130094602871,4.58316410751517,4.81188910562325,7.53590771747707,1.5107877947794,4.72515750162264,3.15224842256954,2.71885445390523,3.62432218226274,0.415149390336707,0.798049746802062,1.36586884603307,0.486213434136588,0.838452650511929,0.183843508450014,0.44449345560323,0.412070114477788,0.64183841918363,1.01078884705519,1.2673964994512,1.13175804831646,0.561849044819294,1.34452820050225,1.32101578597911,0.952587382566147,0.927074607558844,1.35036454324594,0.412085900803307,1.17759136107518,0.342869252385415,0.532427418478012,0.238436189947321,0.436039249896986,0.376437521661322,0.930760686808441,0.548783918618318,1.57841826862706,0.814824683075171,0.561142271657738,1.42362021749009,0.492522411877817,0,0.929621047115796,1.15743966588685,3.2475375131933,0.233931608445408,0.859484216193193,0.765153328275374,0.441182838239031,0.231867835620421|short_description=p6@Fry}} | ||
|EntrezGene=320365 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=E9PVT7,E9Q8I9,Q4VA57,Q8BIX6,Q8BUA0 | |||
|association_with_transcript=-100bp_to_ENSMUST00000052630,ENSMUST00000087204,NM_172887,uc009atv.2_5end | |||
|description=CAGE_peak_6_at_Fry_5end | |||
|id=chr5:151062388..151062404,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.95e-15!23;CL:0000337!3.95e-15!23;CL:0000540!5.70e-14!33;CL:0000047!5.70e-14!33;CL:0000031!5.70e-14!33;CL:0000404!5.70e-14!33;CL:0000393!1.55e-09!39;CL:0000211!1.55e-09!39;CL:0000221!7.07e-08!44;CL:0000133!7.07e-08!44;CL:0002319!9.62e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.31e-28,23;CL:0000337,4.31e-28,23;CL:0000540,1.08e-20,33;CL:0000047,1.08e-20,33;CL:0000031,1.08e-20,33;CL:0000404,1.08e-20,33;CL:0000393,2.45e-16,39;CL:0000211,2.45e-16,39;CL:0002319,3.96e-14,43;CL:0000221,1.22e-13,44;CL:0000133,1.22e-13,44;CL:0002609,2.82e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.37e-23!73;UBERON:0005743!4.37e-23!73;UBERON:0004121!1.35e-22!102;UBERON:0000924!1.35e-22!102;UBERON:0006601!1.35e-22!102;UBERON:0000073!4.19e-22!75;UBERON:0001016!4.19e-22!75;UBERON:0001049!1.15e-21!52;UBERON:0005068!1.15e-21!52;UBERON:0006241!1.15e-21!52;UBERON:0007135!1.15e-21!52;UBERON:0000955!1.82e-20!50;UBERON:0006238!1.82e-20!50;UBERON:0000033!8.01e-20!63;UBERON:0002616!9.45e-20!49;UBERON:0002020!1.73e-19!34;UBERON:0002346!2.16e-19!71;UBERON:0003075!2.16e-19!71;UBERON:0007284!2.16e-19!71;UBERON:0003080!7.18e-18!40;UBERON:0002780!2.19e-17!39;UBERON:0001890!2.19e-17!39;UBERON:0006240!2.19e-17!39;UBERON:0002791!1.47e-16!29;UBERON:0003528!1.47e-16!29;UBERON:0001893!1.47e-16!29;UBERON:0003056!5.09e-16!49;UBERON:0000956!1.04e-11!21;UBERON:0001869!1.04e-11!21;UBERON:0000203!1.04e-11!21;UBERON:0002619!3.51e-09!17;UBERON:0000153!7.76e-09!94;UBERON:0007811!1.14e-08!86;UBERON:0002021!7.60e-08!10;UBERON:0000411!7.60e-08!10;UBERON:0001950!7.60e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.15e-38,34;UBERON:0000073,2.82e-38,54;UBERON:0001017,3.85e-37,73;UBERON:0001049,4.05e-36,52;UBERON:0005068,4.05e-36,52;UBERON:0006241,4.05e-36,52;UBERON:0007135,4.05e-36,52;UBERON:0001016,9.06e-36,75;UBERON:0003528,1.30e-32,29;UBERON:0002791,1.30e-32,29;UBERON:0001893,1.30e-32,29;UBERON:0000955,1.18e-30,47;UBERON:0006238,1.18e-30,47;UBERON:0004121,2.00e-30,95;UBERON:0000924,2.00e-30,95;UBERON:0006601,2.00e-30,95;UBERON:0002616,2.45e-29,46;UBERON:0003080,1.19e-28,40;UBERON:0002780,1.01e-27,39;UBERON:0001890,1.01e-27,39;UBERON:0006240,1.01e-27,39;UBERON:0002346,4.83e-27,64;UBERON:0003075,4.83e-27,64;UBERON:0007284,4.83e-27,64;UBERON:0010371,1.11e-24,73;UBERON:0000956,4.97e-23,21;UBERON:0001869,4.97e-23,21;UBERON:0000203,4.97e-23,21;UBERON:0003056,1.41e-21,49;UBERON:0002619,4.96e-18,17;UBERON:0010314,4.25e-17,92;UBERON:0002021,7.70e-14,10;UBERON:0000411,7.70e-14,10;UBERON:0001950,7.70e-14,10;UBERON:0004111,8.43e-11,122;UBERON:0000025,8.56e-11,114;UBERON:0002420,1.76e-10,8;UBERON:0007245,1.76e-10,8;UBERON:0010009,1.76e-10,8;UBERON:0010011,1.76e-10,8;UBERON:0000454,1.76e-10,8;UBERON:0002240,1.03e-07,6;UBERON:0005174,1.03e-07,6;UBERON:0001137,1.03e-07,6;UBERON:0003076,1.06e-07,12;UBERON:0003057,1.06e-07,12;UBERON:0000369,3.34e-07,5;UBERON:0002435,3.34e-07,5;UBERON:0000204,3.34e-07,5;UBERON:0010082,3.34e-07,5;UBERON:0001948,9.92e-07,5;UBERON:0002315,9.92e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45096213891115,3.70293685490423,4.43681982454325,0,0,0,0,0,0,0,2.07379224616955,3.51015439662396,2.73422449756797,1.99955689082663,1.54607978666129,4.89963196859816,4.98396449294829,6.43453150627015,2.20231761998777,2.42605942361857,1.22885226604995,2.63772575460388,4.66586982372289,1.04182674111352,1.67509799400829,2.8138130501584,3.0559649555362,2.06240009831567,3.70166370077668,2.23679334990361,0.075726193333184,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0.304465478312141,0.691846491768175,0.301445281105245,0.705532242814229,0.125666591329675,0,0.289198713839823,0,0.323533699894818,0,0,0,2.63502717310392,3.35114730901528,0,0,0,0,1.3481157546434,2.28750301409313,9.67538511269056,5.38855392596057,5.37002460393694,2.49345653471472,2.27137768294861,0.509196819251581,0.124406970610093,0.252722758433675,0,0.130120442962704,0.229902104433473,0.180062129805349,0.30140963567143,0.408218994907967,0.12811372028485,0.281105173679186,0.258703370739016,0,0.756424320671277,0.175951124163949,0.219195732427575,0,1.0447564995665,0.61734640922383,0.398068533636986,0,0,0,1.24275463521301,0.469052119962192,0.36012412292203,0,0,0.308534225774757,0,0.268273401399619,0.233530684734339,0,0.32833492815819,0.243206428637567,0.292399974850665,0.439100230582101,0.134206418760372,5.46753866266731,4.01327988279209,0,0,0.213288250535234,0.464473343720877,0,0.403367049246685,0.667134131534611,0.190225626112559,0,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0,0.771494018793504,0.442655759869801,0.885660887877613,0.156998727841375,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.642202359951168,1.52375192569864,0,0,0.94652465824877,0,0.430846795465598,0,0.222798674082394,0.849229592366497,1.21443210502468,1.46127928955656,0.395287777946524,3.85585579706168,0.141940085208269,0.178065603667255,0.325773918707152,0.164970122972535,1.32745138339963,0,0.604647113929502,0,0.590603785761546,0.614870295887855,0.775284879504663,0,0.712994756769443,0.316036757935816,0,1.03135543248187,1.36175842301515,0.36012218806262,0.129358683782755,0,0.354680467284547,0.535106452806212,0.658196082408484,0.913394847343798,0,0.21183207086382,0.661585194164886,0.8244312647074,1.13025098687134,1.08563264870681,0.716234064018819,0.820704498725306,0,2.03967832211561,0,0.412773735926445,0.185194527369712,0,0,0,0,0.279902904647316,0,0,0.158167996790568,0.813277868507395,0.216010681643603,0,0,0.134864346384821,0.41326727862668,0,0,2.4853572523477,0,0,0.165458490457098,0.194451188344048,0,0.675824501963113,0.117357238645754,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0,0,1.13365191807606,0,0,0,0.19318959403219,0.187682475451182,0,0.214368379079066,0,3.3885110557024,1.84130094602871,4.58316410751517,4.81188910562325,7.53590771747707,1.5107877947794,4.72515750162264,3.15224842256954,2.71885445390523,3.62432218226274,0.415149390336707,0.798049746802062,1.36586884603307,0.486213434136588,0.838452650511929,0.183843508450014,0.44449345560323,0.412070114477788,0.64183841918363,1.01078884705519,1.2673964994512,1.13175804831646,0.561849044819294,1.34452820050225,1.32101578597911,0.952587382566147,0.927074607558844,1.35036454324594,0.412085900803307,1.17759136107518,0.342869252385415,0.532427418478012,0.238436189947321,0.436039249896986,0.376437521661322,0.930760686808441,0.548783918618318,1.57841826862706,0.814824683075171,0.561142271657738,1.42362021749009,0.492522411877817,0,0.929621047115796,1.15743966588685,3.2475375131933,0.233931608445408,0.859484216193193,0.765153328275374,0.441182838239031,0.231867835620421 | |||
|short_description=p6@Fry | |||
}} |
Revision as of 07:09, 14 September 2013
Short description: | p6@Fry |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Fry_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -100bp_to_ENSMUST00000052630, ENSMUST00000087204, NM_172887, uc009atv.2_5end |
EntrezGene: | Fry |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.31e-28 | 23 |
neuroblast (sensu Vertebrata) | 4.31e-28 | 23 |
neuron | 1.08e-20 | 33 |
neuronal stem cell | 1.08e-20 | 33 |
neuroblast | 1.08e-20 | 33 |
electrically signaling cell | 1.08e-20 | 33 |
electrically responsive cell | 2.45e-16 | 39 |
electrically active cell | 2.45e-16 | 39 |
neural cell | 3.96e-14 | 43 |
ectodermal cell | 1.22e-13 | 44 |
neurectodermal cell | 1.22e-13 | 44 |
neuron of cerebral cortex | 2.82e-09 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.