FFCP PHASE1:Mm9::chr10:126680496..126680508,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=138|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:126680496..126680508,-|id=chr10:126680496..126680508,-|ontology_enrichment_celltype=CL:0000117!1.32e-21!23;CL:0000337!1.32e-21!23;CL:0000540!2.06e-19!33;CL:0000047!2.06e-19!33;CL:0000031!2.06e-19!33;CL:0000404!2.06e-19!33;CL:0000393!3.06e-15!39;CL:0000211!3.06e-15!39;CL:0002319!3.00e-14!43;CL:0000221!9.47e-14!44;CL:0000133!9.47e-14!44;CL:0000055!3.41e-11!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.96e-22,23;CL:0000337,1.96e-22,23;CL:0000540,1.20e-14,33;CL:0000047,1.20e-14,33;CL:0000031,1.20e-14,33;CL:0000404,1.20e-14,33;CL:0000393,6.77e-12,39;CL:0000211,6.77e-12,39;CL:0002319,1.71e-10,43;CL:0000221,3.50e-10,44;CL:0000133,3.50e-10,44;CL:0002610,3.92e-09,3;CL:0002614,4.73e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.07e-39!75;UBERON:0001016!5.07e-39!75;UBERON:0001017!6.43e-39!73;UBERON:0005743!6.43e-39!73;UBERON:0001049!2.46e-36!52;UBERON:0005068!2.46e-36!52;UBERON:0006241!2.46e-36!52;UBERON:0007135!2.46e-36!52;UBERON:0002616!5.82e-33!49;UBERON:0000955!4.67e-32!50;UBERON:0006238!4.67e-32!50;UBERON:0002346!9.02e-32!71;UBERON:0003075!9.02e-32!71;UBERON:0007284!9.02e-32!71;UBERON:0002020!1.57e-31!34;UBERON:0004121!6.43e-31!102;UBERON:0000924!6.43e-31!102;UBERON:0006601!6.43e-31!102;UBERON:0000033!2.79e-30!63;UBERON:0003056!2.95e-27!49;UBERON:0003080!2.61e-26!40;UBERON:0002791!1.95e-25!29;UBERON:0003528!1.95e-25!29;UBERON:0001893!1.95e-25!29;UBERON:0002780!3.84e-25!39;UBERON:0001890!3.84e-25!39;UBERON:0006240!3.84e-25!39;UBERON:0007811!1.04e-19!86;UBERON:0000153!6.01e-18!94;UBERON:0000956!1.06e-16!21;UBERON:0001869!1.06e-16!21;UBERON:0000203!1.06e-16!21;UBERON:0002021!2.65e-15!10;UBERON:0000411!2.65e-15!10;UBERON:0001950!2.65e-15!10;UBERON:0002619!7.56e-15!17;UBERON:0000025!1.67e-10!114;UBERON:0003076!4.21e-10!12;UBERON:0003057!4.21e-10!12;UBERON:0002420!5.84e-10!8;UBERON:0007245!5.84e-10!8;UBERON:0010009!5.84e-10!8;UBERON:0010011!5.84e-10!8;UBERON:0000454!5.84e-10!8;UBERON:0004111!4.66e-09!122;UBERON:0002298!8.79e-09!6;UBERON:0002240!1.95e-08!6;UBERON:0005174!1.95e-08!6;UBERON:0001137!1.95e-08!6;UBERON:0001948!3.03e-07!5;UBERON:0002315!3.03e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.14e-40,54;UBERON:0002020,6.82e-38,34;UBERON:0001049,1.52e-35,52;UBERON:0005068,1.52e-35,52;UBERON:0006241,1.52e-35,52;UBERON:0007135,1.52e-35,52;UBERON:0001017,1.01e-34,73;UBERON:0001016,1.24e-33,75;UBERON:0003528,2.60e-30,29;UBERON:0002791,2.60e-30,29;UBERON:0001893,2.60e-30,29;UBERON:0003080,2.19e-28,40;UBERON:0002021,4.04e-28,10;UBERON:0000411,4.04e-28,10;UBERON:0001950,4.04e-28,10;UBERON:0002346,8.57e-28,64;UBERON:0003075,8.57e-28,64;UBERON:0007284,8.57e-28,64;UBERON:0002616,1.39e-26,46;UBERON:0002780,1.70e-26,39;UBERON:0001890,1.70e-26,39;UBERON:0006240,1.70e-26,39;UBERON:0000955,6.58e-26,47;UBERON:0006238,6.58e-26,47;UBERON:0004121,2.92e-25,95;UBERON:0000924,2.92e-25,95;UBERON:0006601,2.92e-25,95;UBERON:0010371,1.20e-23,73;UBERON:0003056,2.88e-22,49;UBERON:0000956,2.82e-20,21;UBERON:0001869,2.82e-20,21;UBERON:0000203,2.82e-20,21;UBERON:0002619,9.73e-19,17;UBERON:0010314,1.49e-17,92;UBERON:0000025,5.02e-13,114;UBERON:0004111,8.78e-12,122;UBERON:0002950,3.12e-11,4;UBERON:0001891,3.12e-11,4;UBERON:0009616,3.12e-11,4;UBERON:0010286,3.12e-11,4;UBERON:0002420,4.31e-11,8;UBERON:0007245,4.31e-11,8;UBERON:0010009,4.31e-11,8;UBERON:0010011,4.31e-11,8;UBERON:0000454,4.31e-11,8;UBERON:0002240,7.14e-11,6;UBERON:0005174,7.14e-11,6;UBERON:0001137,7.14e-11,6;UBERON:0004684,3.92e-09,3;UBERON:0002275,3.92e-09,3;UBERON:0011216,4.03e-09,194;UBERON:0002038,4.73e-09,3;UBERON:0009663,4.73e-09,3;UBERON:0009661,4.73e-09,3;UBERON:0000125,4.73e-09,3;UBERON:0002308,4.73e-09,3;UBERON:0001948,1.16e-08,5;UBERON:0002315,1.16e-08,5;UBERON:0003076,1.92e-07,12;UBERON:0003057,1.92e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0.207379224616955,1.21505344498522,0,1.42825492201902,2.42955395046775,0.244981598429908,0.670918297127655,0,2.20231761998777,7.2781782708557,8.60196586234964,0.131886287730194,1.00636407962651,1.04182674111352,8.37548997004143,2.25105044012672,3.51435969886663,2.35702868378934,2.42031857358475,0.559198337475902,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.83778682725382,0,0,0,0,1.79748767285787,1.37250180845588,0.502617408451458,2.08589184230732,1.27857728665165,1.66230435647648,2.10913641988085,0.101839363850316,0,0,0.210441855886474,0,0.229902104433473,0,0,0.408218994907967,0.12811372028485,0,0.517406741478031,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=138 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:126680496..126680508,- | |||
|id=chr10:126680496..126680508,- | |||
|ontology_enrichment_celltype=CL:0000117!1.32e-21!23;CL:0000337!1.32e-21!23;CL:0000540!2.06e-19!33;CL:0000047!2.06e-19!33;CL:0000031!2.06e-19!33;CL:0000404!2.06e-19!33;CL:0000393!3.06e-15!39;CL:0000211!3.06e-15!39;CL:0002319!3.00e-14!43;CL:0000221!9.47e-14!44;CL:0000133!9.47e-14!44;CL:0000055!3.41e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.96e-22,23;CL:0000337,1.96e-22,23;CL:0000540,1.20e-14,33;CL:0000047,1.20e-14,33;CL:0000031,1.20e-14,33;CL:0000404,1.20e-14,33;CL:0000393,6.77e-12,39;CL:0000211,6.77e-12,39;CL:0002319,1.71e-10,43;CL:0000221,3.50e-10,44;CL:0000133,3.50e-10,44;CL:0002610,3.92e-09,3;CL:0002614,4.73e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.07e-39!75;UBERON:0001016!5.07e-39!75;UBERON:0001017!6.43e-39!73;UBERON:0005743!6.43e-39!73;UBERON:0001049!2.46e-36!52;UBERON:0005068!2.46e-36!52;UBERON:0006241!2.46e-36!52;UBERON:0007135!2.46e-36!52;UBERON:0002616!5.82e-33!49;UBERON:0000955!4.67e-32!50;UBERON:0006238!4.67e-32!50;UBERON:0002346!9.02e-32!71;UBERON:0003075!9.02e-32!71;UBERON:0007284!9.02e-32!71;UBERON:0002020!1.57e-31!34;UBERON:0004121!6.43e-31!102;UBERON:0000924!6.43e-31!102;UBERON:0006601!6.43e-31!102;UBERON:0000033!2.79e-30!63;UBERON:0003056!2.95e-27!49;UBERON:0003080!2.61e-26!40;UBERON:0002791!1.95e-25!29;UBERON:0003528!1.95e-25!29;UBERON:0001893!1.95e-25!29;UBERON:0002780!3.84e-25!39;UBERON:0001890!3.84e-25!39;UBERON:0006240!3.84e-25!39;UBERON:0007811!1.04e-19!86;UBERON:0000153!6.01e-18!94;UBERON:0000956!1.06e-16!21;UBERON:0001869!1.06e-16!21;UBERON:0000203!1.06e-16!21;UBERON:0002021!2.65e-15!10;UBERON:0000411!2.65e-15!10;UBERON:0001950!2.65e-15!10;UBERON:0002619!7.56e-15!17;UBERON:0000025!1.67e-10!114;UBERON:0003076!4.21e-10!12;UBERON:0003057!4.21e-10!12;UBERON:0002420!5.84e-10!8;UBERON:0007245!5.84e-10!8;UBERON:0010009!5.84e-10!8;UBERON:0010011!5.84e-10!8;UBERON:0000454!5.84e-10!8;UBERON:0004111!4.66e-09!122;UBERON:0002298!8.79e-09!6;UBERON:0002240!1.95e-08!6;UBERON:0005174!1.95e-08!6;UBERON:0001137!1.95e-08!6;UBERON:0001948!3.03e-07!5;UBERON:0002315!3.03e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.14e-40,54;UBERON:0002020,6.82e-38,34;UBERON:0001049,1.52e-35,52;UBERON:0005068,1.52e-35,52;UBERON:0006241,1.52e-35,52;UBERON:0007135,1.52e-35,52;UBERON:0001017,1.01e-34,73;UBERON:0001016,1.24e-33,75;UBERON:0003528,2.60e-30,29;UBERON:0002791,2.60e-30,29;UBERON:0001893,2.60e-30,29;UBERON:0003080,2.19e-28,40;UBERON:0002021,4.04e-28,10;UBERON:0000411,4.04e-28,10;UBERON:0001950,4.04e-28,10;UBERON:0002346,8.57e-28,64;UBERON:0003075,8.57e-28,64;UBERON:0007284,8.57e-28,64;UBERON:0002616,1.39e-26,46;UBERON:0002780,1.70e-26,39;UBERON:0001890,1.70e-26,39;UBERON:0006240,1.70e-26,39;UBERON:0000955,6.58e-26,47;UBERON:0006238,6.58e-26,47;UBERON:0004121,2.92e-25,95;UBERON:0000924,2.92e-25,95;UBERON:0006601,2.92e-25,95;UBERON:0010371,1.20e-23,73;UBERON:0003056,2.88e-22,49;UBERON:0000956,2.82e-20,21;UBERON:0001869,2.82e-20,21;UBERON:0000203,2.82e-20,21;UBERON:0002619,9.73e-19,17;UBERON:0010314,1.49e-17,92;UBERON:0000025,5.02e-13,114;UBERON:0004111,8.78e-12,122;UBERON:0002950,3.12e-11,4;UBERON:0001891,3.12e-11,4;UBERON:0009616,3.12e-11,4;UBERON:0010286,3.12e-11,4;UBERON:0002420,4.31e-11,8;UBERON:0007245,4.31e-11,8;UBERON:0010009,4.31e-11,8;UBERON:0010011,4.31e-11,8;UBERON:0000454,4.31e-11,8;UBERON:0002240,7.14e-11,6;UBERON:0005174,7.14e-11,6;UBERON:0001137,7.14e-11,6;UBERON:0004684,3.92e-09,3;UBERON:0002275,3.92e-09,3;UBERON:0011216,4.03e-09,194;UBERON:0002038,4.73e-09,3;UBERON:0009663,4.73e-09,3;UBERON:0009661,4.73e-09,3;UBERON:0000125,4.73e-09,3;UBERON:0002308,4.73e-09,3;UBERON:0001948,1.16e-08,5;UBERON:0002315,1.16e-08,5;UBERON:0003076,1.92e-07,12;UBERON:0003057,1.92e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0.207379224616955,1.21505344498522,0,1.42825492201902,2.42955395046775,0.244981598429908,0.670918297127655,0,2.20231761998777,7.2781782708557,8.60196586234964,0.131886287730194,1.00636407962651,1.04182674111352,8.37548997004143,2.25105044012672,3.51435969886663,2.35702868378934,2.42031857358475,0.559198337475902,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.83778682725382,0,0,0,0,1.79748767285787,1.37250180845588,0.502617408451458,2.08589184230732,1.27857728665165,1.66230435647648,2.10913641988085,0.101839363850316,0,0,0.210441855886474,0,0.229902104433473,0,0,0.408218994907967,0.12811372028485,0,0.517406741478031,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,2.57865710502847,0,0,0,0,0.430846795465598,0,0,0,0.404810701674894,0.584511715822624,0.790575555893047,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.34177395402186,8.74617949363636,8.59343270159095,3.26521046453006,4.7955776383945,11.3309084608455,8.10027000278167,11.2580300806055,9.06284817968409,6.21312374102184,0,0.399024873401031,0,0,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.25384382367503,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr10:126680496..126680508,- | |||
}} |
Revision as of 16:01, 12 September 2013
Short description: | p@chr10:126680496..126680508, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:126680496..126680508, - |
Coexpression cluster: | MCL_coexpression_mm9:138 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.96e-22 | 23 |
neuroblast (sensu Vertebrata) | 1.96e-22 | 23 |
neuron | 1.20e-14 | 33 |
neuronal stem cell | 1.20e-14 | 33 |
neuroblast | 1.20e-14 | 33 |
electrically signaling cell | 1.20e-14 | 33 |
electrically responsive cell | 6.77e-12 | 39 |
electrically active cell | 6.77e-12 | 39 |
neural cell | 1.71e-10 | 43 |
ectodermal cell | 3.50e-10 | 44 |
neurectodermal cell | 3.50e-10 | 44 |
raphe nuclei neuron | 3.92e-09 | 3 |
neuron of the substantia nigra | 4.73e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.