FFCP PHASE1:Mm9::chr17:90435182..90435203,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=145|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:90435182..90435203,-|id=chr17:90435182..90435203,-|ontology_enrichment_celltype=CL:0000117!9.78e-16!23;CL:0000337!9.78e-16!23;CL:0000540!1.09e-13!33;CL:0000047!1.09e-13!33;CL:0000031!1.09e-13!33;CL:0000404!1.09e-13!33;CL:0002319!3.82e-10!43;CL:0000393!5.99e-10!39;CL:0000211!5.99e-10!39;CL:0000221!1.15e-09!44;CL:0000133!1.15e-09!44;CL:0000055!2.82e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.90e-25,23;CL:0000337,1.90e-25,23;CL:0000540,5.51e-18,33;CL:0000047,5.51e-18,33;CL:0000031,5.51e-18,33;CL:0000404,5.51e-18,33;CL:0000393,2.00e-14,39;CL:0000211,2.00e-14,39;CL:0002319,1.30e-12,43;CL:0000221,3.27e-12,44;CL:0000133,3.27e-12,44;CL:0002610,3.55e-07,3;CL:0002612,5.87e-07,3;CL:0002614,8.03e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.75e-33!71;UBERON:0003075!3.75e-33!71;UBERON:0007284!3.75e-33!71;UBERON:0001017!8.34e-31!73;UBERON:0005743!8.34e-31!73;UBERON:0000955!2.31e-30!50;UBERON:0006238!2.31e-30!50;UBERON:0000073!3.78e-30!75;UBERON:0001016!3.78e-30!75;UBERON:0001049!1.08e-29!52;UBERON:0005068!1.08e-29!52;UBERON:0006241!1.08e-29!52;UBERON:0007135!1.08e-29!52;UBERON:0002616!1.72e-29!49;UBERON:0000033!1.79e-29!63;UBERON:0004121!2.77e-26!102;UBERON:0000924!2.77e-26!102;UBERON:0006601!2.77e-26!102;UBERON:0003056!1.39e-25!49;UBERON:0003080!1.99e-24!40;UBERON:0002780!1.08e-23!39;UBERON:0001890!1.08e-23!39;UBERON:0006240!1.08e-23!39;UBERON:0002020!3.03e-23!34;UBERON:0002791!2.58e-21!29;UBERON:0003528!2.58e-21!29;UBERON:0001893!2.58e-21!29;UBERON:0007811!1.04e-15!86;UBERON:0000956!3.76e-15!21;UBERON:0001869!3.76e-15!21;UBERON:0000203!3.76e-15!21;UBERON:0000153!1.16e-12!94;UBERON:0002619!1.86e-12!17;UBERON:0002021!2.85e-10!10;UBERON:0000411!2.85e-10!10;UBERON:0001950!2.85e-10!10;UBERON:0000025!6.51e-08!114;UBERON:0002420!2.52e-07!8;UBERON:0007245!2.52e-07!8;UBERON:0010009!2.52e-07!8;UBERON:0010011!2.52e-07!8;UBERON:0000454!2.52e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.24e-50,54;UBERON:0001049,7.71e-46,52;UBERON:0005068,7.71e-46,52;UBERON:0006241,7.71e-46,52;UBERON:0007135,7.71e-46,52;UBERON:0001017,3.17e-45,73;UBERON:0001016,9.40e-44,75;UBERON:0000955,1.53e-42,47;UBERON:0006238,1.53e-42,47;UBERON:0002020,2.01e-42,34;UBERON:0002616,7.99e-41,46;UBERON:0003528,8.67e-40,29;UBERON:0002791,8.67e-40,29;UBERON:0001893,8.67e-40,29;UBERON:0002346,1.73e-37,64;UBERON:0003075,1.73e-37,64;UBERON:0007284,1.73e-37,64;UBERON:0003080,8.35e-37,40;UBERON:0002780,2.62e-35,39;UBERON:0001890,2.62e-35,39;UBERON:0006240,2.62e-35,39;UBERON:0004121,1.96e-32,95;UBERON:0000924,1.96e-32,95;UBERON:0006601,1.96e-32,95;UBERON:0010371,1.05e-31,73;UBERON:0003056,1.35e-28,49;UBERON:0000956,1.50e-26,21;UBERON:0001869,1.50e-26,21;UBERON:0000203,1.50e-26,21;UBERON:0010314,3.28e-23,92;UBERON:0002619,9.17e-21,17;UBERON:0002021,1.85e-20,10;UBERON:0000411,1.85e-20,10;UBERON:0001950,1.85e-20,10;UBERON:0000025,7.39e-16,114;UBERON:0004111,3.27e-14,122;UBERON:0002420,4.50e-14,8;UBERON:0007245,4.50e-14,8;UBERON:0010009,4.50e-14,8;UBERON:0010011,4.50e-14,8;UBERON:0000454,4.50e-14,8;UBERON:0011216,1.12e-10,194;UBERON:0003076,5.74e-09,12;UBERON:0003057,5.74e-09,12;UBERON:0000369,7.42e-09,5;UBERON:0002435,7.42e-09,5;UBERON:0000204,7.42e-09,5;UBERON:0010082,7.42e-09,5;UBERON:0002950,3.32e-08,4;UBERON:0001891,3.32e-08,4;UBERON:0009616,3.32e-08,4;UBERON:0010286,3.32e-08,4;UBERON:0000483,7.16e-08,174;UBERON:0000119,1.12e-07,176;UBERON:0004684,3.55e-07,3;UBERON:0002275,3.55e-07,3;UBERON:0002257,5.87e-07,3;UBERON:0002038,8.03e-07,3;UBERON:0009663,8.03e-07,3;UBERON:0009661,8.03e-07,3;UBERON:0000125,8.03e-07,3;UBERON:0002308,8.03e-07,3|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0,0,0,0,0,0,0,0,0,1.61853168687678,6.34789175126439,0.633831403506179,0,0,0,0,0,0,0,1.65903379693564,2.16009501330705,1.89292465216244,0,0.441737081903227,1.83736198822431,0.958454710182364,1.83843757322004,6.60695285996332,15.3224805702225,18.279177457493,2.1101806036831,3.47653045689157,4.68822033501084,4.74611098302348,9.00420176050688,10.5430790965999,22.3917724959987,9.681274294339,4.65998614563251,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0,0.304465478312141,0.230615497256059,0.301445281105245,0.23517741427141,0,0,0,0,0,0,0,0,3.51336956413857,4.81727425670947,0,0.239630249011841,0,0.127070227073065,2.54644086988199,4.11750542536764,3.01570445070875,5.56237824615285,8.69432554923124,5.40248915854856,4.70499662896497,0.203678727700633,0.124406970610093,0,0.631325567659422,0,0,0.180062129805349,0.452114453507145,0.476255494059295,0.896796041993948,0.281105173679186,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,3.15434922846191,4.52780294468852,0,0,0,0.232236671860439,0,0,0,0.380451252225118,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0,0,0,0,0.469380496577004,0,0.238043640886014,0,0,0,0,0.327726629431476,0.172684981865896,0,0,0,0,0,1.9266070798535,2.34423373184406,0,0,0.631016438832513,0.780877488593277,1.29254038639679,0,0,0,0,0,0.790575555893047,5.14114106274891,0,0,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,1.70219802876894,0.540183282093931,0,0.428674070063185,0.354680467284547,0.891844088010353,0.493647061806363,0,0,0,0,0,0,0,0,0,0,3.8939313422207,0,0.82554747185289,0,0,0,0,0.169978429993855,0.139951452323658,0.276399947608848,0,0,0,0,0.209088296014469,0.436725127492355,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.3310663342144,13.3494318587081,16.0410743763031,35.4017555627996,12.3314853558716,11.3309084608455,8.10027000278167,8.55610286126019,6.79713613476307,19.1571315348173,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0,0,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0.760437899670719,0.188626341386076,0.280924522409647,0.192075457214608,0.0574354689556133,1.42888107384922,0.231768651889711,0.38581844092741,0,0.294397840268795,0.685738504770831,1.4198064492747,0.476872379894642,0.145346416632329,0.282328141245992,0.423073039458382,0.182927972872773,0.526139422875686,0.679020569229309,0,0.118635018124174,0.197008964751127,1.22769312950907,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0,0.231867835620421|short_description=p@chr17:90435182..90435203,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=145 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:90435182..90435203,- | |||
|id=chr17:90435182..90435203,- | |||
|ontology_enrichment_celltype=CL:0000117!9.78e-16!23;CL:0000337!9.78e-16!23;CL:0000540!1.09e-13!33;CL:0000047!1.09e-13!33;CL:0000031!1.09e-13!33;CL:0000404!1.09e-13!33;CL:0002319!3.82e-10!43;CL:0000393!5.99e-10!39;CL:0000211!5.99e-10!39;CL:0000221!1.15e-09!44;CL:0000133!1.15e-09!44;CL:0000055!2.82e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.90e-25,23;CL:0000337,1.90e-25,23;CL:0000540,5.51e-18,33;CL:0000047,5.51e-18,33;CL:0000031,5.51e-18,33;CL:0000404,5.51e-18,33;CL:0000393,2.00e-14,39;CL:0000211,2.00e-14,39;CL:0002319,1.30e-12,43;CL:0000221,3.27e-12,44;CL:0000133,3.27e-12,44;CL:0002610,3.55e-07,3;CL:0002612,5.87e-07,3;CL:0002614,8.03e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.75e-33!71;UBERON:0003075!3.75e-33!71;UBERON:0007284!3.75e-33!71;UBERON:0001017!8.34e-31!73;UBERON:0005743!8.34e-31!73;UBERON:0000955!2.31e-30!50;UBERON:0006238!2.31e-30!50;UBERON:0000073!3.78e-30!75;UBERON:0001016!3.78e-30!75;UBERON:0001049!1.08e-29!52;UBERON:0005068!1.08e-29!52;UBERON:0006241!1.08e-29!52;UBERON:0007135!1.08e-29!52;UBERON:0002616!1.72e-29!49;UBERON:0000033!1.79e-29!63;UBERON:0004121!2.77e-26!102;UBERON:0000924!2.77e-26!102;UBERON:0006601!2.77e-26!102;UBERON:0003056!1.39e-25!49;UBERON:0003080!1.99e-24!40;UBERON:0002780!1.08e-23!39;UBERON:0001890!1.08e-23!39;UBERON:0006240!1.08e-23!39;UBERON:0002020!3.03e-23!34;UBERON:0002791!2.58e-21!29;UBERON:0003528!2.58e-21!29;UBERON:0001893!2.58e-21!29;UBERON:0007811!1.04e-15!86;UBERON:0000956!3.76e-15!21;UBERON:0001869!3.76e-15!21;UBERON:0000203!3.76e-15!21;UBERON:0000153!1.16e-12!94;UBERON:0002619!1.86e-12!17;UBERON:0002021!2.85e-10!10;UBERON:0000411!2.85e-10!10;UBERON:0001950!2.85e-10!10;UBERON:0000025!6.51e-08!114;UBERON:0002420!2.52e-07!8;UBERON:0007245!2.52e-07!8;UBERON:0010009!2.52e-07!8;UBERON:0010011!2.52e-07!8;UBERON:0000454!2.52e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.24e-50,54;UBERON:0001049,7.71e-46,52;UBERON:0005068,7.71e-46,52;UBERON:0006241,7.71e-46,52;UBERON:0007135,7.71e-46,52;UBERON:0001017,3.17e-45,73;UBERON:0001016,9.40e-44,75;UBERON:0000955,1.53e-42,47;UBERON:0006238,1.53e-42,47;UBERON:0002020,2.01e-42,34;UBERON:0002616,7.99e-41,46;UBERON:0003528,8.67e-40,29;UBERON:0002791,8.67e-40,29;UBERON:0001893,8.67e-40,29;UBERON:0002346,1.73e-37,64;UBERON:0003075,1.73e-37,64;UBERON:0007284,1.73e-37,64;UBERON:0003080,8.35e-37,40;UBERON:0002780,2.62e-35,39;UBERON:0001890,2.62e-35,39;UBERON:0006240,2.62e-35,39;UBERON:0004121,1.96e-32,95;UBERON:0000924,1.96e-32,95;UBERON:0006601,1.96e-32,95;UBERON:0010371,1.05e-31,73;UBERON:0003056,1.35e-28,49;UBERON:0000956,1.50e-26,21;UBERON:0001869,1.50e-26,21;UBERON:0000203,1.50e-26,21;UBERON:0010314,3.28e-23,92;UBERON:0002619,9.17e-21,17;UBERON:0002021,1.85e-20,10;UBERON:0000411,1.85e-20,10;UBERON:0001950,1.85e-20,10;UBERON:0000025,7.39e-16,114;UBERON:0004111,3.27e-14,122;UBERON:0002420,4.50e-14,8;UBERON:0007245,4.50e-14,8;UBERON:0010009,4.50e-14,8;UBERON:0010011,4.50e-14,8;UBERON:0000454,4.50e-14,8;UBERON:0011216,1.12e-10,194;UBERON:0003076,5.74e-09,12;UBERON:0003057,5.74e-09,12;UBERON:0000369,7.42e-09,5;UBERON:0002435,7.42e-09,5;UBERON:0000204,7.42e-09,5;UBERON:0010082,7.42e-09,5;UBERON:0002950,3.32e-08,4;UBERON:0001891,3.32e-08,4;UBERON:0009616,3.32e-08,4;UBERON:0010286,3.32e-08,4;UBERON:0000483,7.16e-08,174;UBERON:0000119,1.12e-07,176;UBERON:0004684,3.55e-07,3;UBERON:0002275,3.55e-07,3;UBERON:0002257,5.87e-07,3;UBERON:0002038,8.03e-07,3;UBERON:0009663,8.03e-07,3;UBERON:0009661,8.03e-07,3;UBERON:0000125,8.03e-07,3;UBERON:0002308,8.03e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0,0,0,0,0,0,0,0,0,1.61853168687678,6.34789175126439,0.633831403506179,0,0,0,0,0,0,0,1.65903379693564,2.16009501330705,1.89292465216244,0,0.441737081903227,1.83736198822431,0.958454710182364,1.83843757322004,6.60695285996332,15.3224805702225,18.279177457493,2.1101806036831,3.47653045689157,4.68822033501084,4.74611098302348,9.00420176050688,10.5430790965999,22.3917724959987,9.681274294339,4.65998614563251,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0,0.304465478312141,0.230615497256059,0.301445281105245,0.23517741427141,0,0,0,0,0,0,0,0,3.51336956413857,4.81727425670947,0,0.239630249011841,0,0.127070227073065,2.54644086988199,4.11750542536764,3.01570445070875,5.56237824615285,8.69432554923124,5.40248915854856,4.70499662896497,0.203678727700633,0.124406970610093,0,0.631325567659422,0,0,0.180062129805349,0.452114453507145,0.476255494059295,0.896796041993948,0.281105173679186,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,3.15434922846191,4.52780294468852,0,0,0,0.232236671860439,0,0,0,0.380451252225118,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0,0,0,0,0.469380496577004,0,0.238043640886014,0,0,0,0,0.327726629431476,0.172684981865896,0,0,0,0,0,1.9266070798535,2.34423373184406,0,0,0.631016438832513,0.780877488593277,1.29254038639679,0,0,0,0,0,0.790575555893047,5.14114106274891,0,0,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,1.70219802876894,0.540183282093931,0,0.428674070063185,0.354680467284547,0.891844088010353,0.493647061806363,0,0,0,0,0,0,0,0,0,0,3.8939313422207,0,0.82554747185289,0,0,0,0,0.169978429993855,0.139951452323658,0.276399947608848,0,0,0,0,0.209088296014469,0.436725127492355,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.3310663342144,13.3494318587081,16.0410743763031,35.4017555627996,12.3314853558716,11.3309084608455,8.10027000278167,8.55610286126019,6.79713613476307,19.1571315348173,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0,0,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0.760437899670719,0.188626341386076,0.280924522409647,0.192075457214608,0.0574354689556133,1.42888107384922,0.231768651889711,0.38581844092741,0,0.294397840268795,0.685738504770831,1.4198064492747,0.476872379894642,0.145346416632329,0.282328141245992,0.423073039458382,0.182927972872773,0.526139422875686,0.679020569229309,0,0.118635018124174,0.197008964751127,1.22769312950907,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr17:90435182..90435203,- | |||
}} |
Revision as of 15:37, 13 September 2013
Short description: | p@chr17:90435182..90435203, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:90435182..90435203, - |
Coexpression cluster: | MCL_coexpression_mm9:145 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.90e-25 | 23 |
neuroblast (sensu Vertebrata) | 1.90e-25 | 23 |
neuron | 5.51e-18 | 33 |
neuronal stem cell | 5.51e-18 | 33 |
neuroblast | 5.51e-18 | 33 |
electrically signaling cell | 5.51e-18 | 33 |
electrically responsive cell | 2.00e-14 | 39 |
electrically active cell | 2.00e-14 | 39 |
neural cell | 1.30e-12 | 43 |
ectodermal cell | 3.27e-12 | 44 |
neurectodermal cell | 3.27e-12 | 44 |
raphe nuclei neuron | 3.55e-07 | 3 |
neuron of the ventral spinal cord | 5.87e-07 | 3 |
neuron of the substantia nigra | 8.03e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.