FFCP PHASE1:Mm9::chr17:56381175..56381209,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=248|UniProt=|association_with_transcript=36bp_to_uc008dbj.1_5end|description=CAGE_peak_1_at_uc008dbj.1_5end|id=chr17:56381175..56381209,+|ontology_enrichment_celltype=CL:0000540!1.26e-15!33;CL:0000047!1.26e-15!33;CL:0000031!1.26e-15!33;CL:0000404!1.26e-15!33;CL:0000221!7.31e-12!44;CL:0000133!7.31e-12!44;CL:0002319!1.39e-11!43;CL:0000393!5.82e-11!39;CL:0000211!5.82e-11!39;CL:0000117!1.41e-09!23;CL:0000337!1.41e-09!23;CL:0000055!5.84e-08!50;CL:0000107!5.73e-07!9|ontology_enrichment_celltype_v019_2=CL:0000540,3.33e-20,33;CL:0000047,3.33e-20,33;CL:0000031,3.33e-20,33;CL:0000404,3.33e-20,33;CL:0000393,1.15e-15,39;CL:0000211,1.15e-15,39;CL:0002319,2.25e-13,43;CL:0000221,7.18e-13,44;CL:0000133,7.18e-13,44;CL:0000117,3.29e-11,23;CL:0000337,3.29e-11,23;CL:0000107,5.88e-10,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.88e-34!71;UBERON:0003075!1.88e-34!71;UBERON:0007284!1.88e-34!71;UBERON:0001017!2.94e-33!73;UBERON:0005743!2.94e-33!73;UBERON:0000073!8.12e-33!75;UBERON:0001016!8.12e-33!75;UBERON:0004121!2.46e-32!102;UBERON:0000924!2.46e-32!102;UBERON:0006601!2.46e-32!102;UBERON:0000033!1.58e-27!63;UBERON:0001049!5.83e-26!52;UBERON:0005068!5.83e-26!52;UBERON:0006241!5.83e-26!52;UBERON:0007135!5.83e-26!52;UBERON:0000955!4.14e-25!50;UBERON:0006238!4.14e-25!50;UBERON:0002616!2.11e-24!49;UBERON:0003056!1.11e-23!49;UBERON:0003080!1.56e-20!40;UBERON:0002780!6.04e-20!39;UBERON:0001890!6.04e-20!39;UBERON:0006240!6.04e-20!39;UBERON:0002020!1.47e-15!34;UBERON:0007811!1.07e-14!86;UBERON:0002791!4.14e-13!29;UBERON:0003528!4.14e-13!29;UBERON:0001893!4.14e-13!29;UBERON:0000153!9.73e-12!94;UBERON:0002021!8.11e-09!10;UBERON:0000411!8.11e-09!10;UBERON:0001950!8.11e-09!10;UBERON:0000956!9.28e-09!21;UBERON:0001869!9.28e-09!21;UBERON:0000203!9.28e-09!21;UBERON:0001894!4.90e-08!10;UBERON:0006222!4.90e-08!10;UBERON:0002619!1.47e-07!17;UBERON:0000007!4.50e-07!8;UBERON:0003296!4.50e-07!8;UBERON:0010133!4.50e-07!8;UBERON:0002410!5.73e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.66e-46,73;UBERON:0001016,9.65e-45,75;UBERON:0004121,6.15e-41,95;UBERON:0000924,6.15e-41,95;UBERON:0006601,6.15e-41,95;UBERON:0002346,3.10e-40,64;UBERON:0003075,3.10e-40,64;UBERON:0007284,3.10e-40,64;UBERON:0000073,3.86e-35,54;UBERON:0010371,1.13e-34,73;UBERON:0001049,2.43e-33,52;UBERON:0005068,2.43e-33,52;UBERON:0006241,2.43e-33,52;UBERON:0007135,2.43e-33,52;UBERON:0003056,1.85e-30,49;UBERON:0000955,9.81e-30,47;UBERON:0006238,9.81e-30,47;UBERON:0002616,1.07e-28,46;UBERON:0010314,1.27e-28,92;UBERON:0003080,2.80e-27,40;UBERON:0002780,2.19e-26,39;UBERON:0001890,2.19e-26,39;UBERON:0006240,2.19e-26,39;UBERON:0002020,7.50e-20,34;UBERON:0003528,3.76e-16,29;UBERON:0002791,3.76e-16,29;UBERON:0001893,3.76e-16,29;UBERON:0002021,8.14e-13,10;UBERON:0000411,8.14e-13,10;UBERON:0001950,8.14e-13,10;UBERON:0001894,1.32e-11,10;UBERON:0006222,1.32e-11,10;UBERON:0000007,4.05e-10,8;UBERON:0003296,4.05e-10,8;UBERON:0010133,4.05e-10,8;UBERON:0002410,5.88e-10,9;UBERON:0000956,9.73e-10,21;UBERON:0001869,9.73e-10,21;UBERON:0000203,9.73e-10,21;UBERON:0011216,1.28e-09,194;UBERON:0002619,7.75e-09,17;UBERON:0002420,4.15e-08,8;UBERON:0007245,4.15e-08,8;UBERON:0010009,4.15e-08,8;UBERON:0010011,4.15e-08,8;UBERON:0000454,4.15e-08,8;UBERON:0000025,9.38e-08,114;UBERON:0000010,1.08e-07,11;UBERON:0004111,5.00e-07,122|phase1_expression=2.88267924788629,0,0,0.60492842261366,0.500895729946347,2.85394762250213,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0.91763712426868,0.57423196411502,0.86152399231815,0.861884930743556,0.570070258369122,0.252030129759931,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.436050312760893,0.219686182734472,0,0,0,0,0,0,0,0,0,2.02316460859598,2.64495489636016,2.53532561402472,0,0,0,0,0,0,0,0.725827286159344,1.08004750665353,1.05162480675691,2.28520787523043,2.65042249141936,0.979926393719632,0.575072826109418,0,1.10115880999389,3.19218345212969,3.22573719838111,6.4624280987795,2.92760459527711,6.25096044668112,2.23346399201105,5.6276261003168,7.48711414106369,5.89257170947335,2.70506193518296,2.42319279572891,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.985903938436763,0,0,0,0,0,0,0.22836775943812,0,0.890652834388949,2.60227990149204,2.43572382649713,0.922461989024234,2.86373017049983,1.17588707135705,0.376999773989026,0,0,0,0,0,0,0,7.02673912827713,3.77004072264219,0,0,0,0,3.74476598512057,5.94750783664214,1.88481528169297,4.69325664519146,8.69432554923124,2.49345653471472,5.67844420737152,0.101839363850316,0.124406970610093,0,0.631325567659422,0.130120442962704,1.14951052216736,1.0803727788321,4.06903008156431,2.85753296435577,2.0498195245576,1.68663104207512,4.9153640440413,0,0,0,0,0,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.57043814830858,1.13195073617213,0.330418782983798,0,1.06644125267617,1.16118335930219,1.15980715189884,0.403367049246685,0.444756087689741,0.380451252225118,1.42358718463353,0.164698954724011,0.754005626400808,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0,1.9266070798535,2.10981035865966,0,0,5.67914794949262,5.85658116444958,9.90947629570875,2.86762557543062,3.56477878531831,5.09537755419898,9.31064613852257,7.89090816360542,13.0444966722353,6.10510501201433,0,0,0,0,0,2.91336763385978,0.302323556964751,1.88605079755898,1.18120757152309,2.45948118355142,1.03371317267288,3.99887102425256,1.06949213515416,0.316036757935816,0,0,82.0459449866629,1.44048875225048,5.17434735131018,14.5749183821483,65.6158864476412,55.8294399094481,52.6556865926787,34.7090041990643,0,0,0,0,0,0,0,0,0.291480836629851,1.11255181206306,0,0,0,0,0,0,0,0,0,0,1.26534397432454,0.609958401380546,0.324016022465404,0.836353184057875,0.655087691238533,0.134864346384821,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0.100826185136841,0,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0.183151624267265,0,0,16.942555278512,11.0478056761722,10.8850147553485,9.6237782112465,19.182310553578,15.107877947794,12.8254275044043,12.6089936902782,15.406841905463,12.4262474820437,0.207574695168353,0.798049746802062,1.53660245178721,0.243106717068294,0.209613162627982,0.183843508450014,1.11123363900808,0.824140228955577,0.320919209591815,0,0.25347929989024,0.754505365544305,0.468207537349412,0.512201219238954,0.34461281373368,0.952587382566147,0.231768651889711,0,0.824171801606613,0.883193520806384,0.685738504770831,0.532427418478012,0.238436189947321,0.872078499793971,0.282328141245992,0.25384382367503,0.182927972872773,0.263069711437843,0.271608227691724,1.12228454331548,0.593175090620871,0.591026894253381,0.818462086339379,0.619747364743864,0.385813221962283,0.749431733813838,0.935726433781634,0,0,0,0.231867835620421|short_description=p1@uc008dbj.1}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=248 | |||
|UniProt= | |||
|association_with_transcript=36bp_to_uc008dbj.1_5end | |||
|description=CAGE_peak_1_at_uc008dbj.1_5end | |||
|id=chr17:56381175..56381209,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.26e-15!33;CL:0000047!1.26e-15!33;CL:0000031!1.26e-15!33;CL:0000404!1.26e-15!33;CL:0000221!7.31e-12!44;CL:0000133!7.31e-12!44;CL:0002319!1.39e-11!43;CL:0000393!5.82e-11!39;CL:0000211!5.82e-11!39;CL:0000117!1.41e-09!23;CL:0000337!1.41e-09!23;CL:0000055!5.84e-08!50;CL:0000107!5.73e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.33e-20,33;CL:0000047,3.33e-20,33;CL:0000031,3.33e-20,33;CL:0000404,3.33e-20,33;CL:0000393,1.15e-15,39;CL:0000211,1.15e-15,39;CL:0002319,2.25e-13,43;CL:0000221,7.18e-13,44;CL:0000133,7.18e-13,44;CL:0000117,3.29e-11,23;CL:0000337,3.29e-11,23;CL:0000107,5.88e-10,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.88e-34!71;UBERON:0003075!1.88e-34!71;UBERON:0007284!1.88e-34!71;UBERON:0001017!2.94e-33!73;UBERON:0005743!2.94e-33!73;UBERON:0000073!8.12e-33!75;UBERON:0001016!8.12e-33!75;UBERON:0004121!2.46e-32!102;UBERON:0000924!2.46e-32!102;UBERON:0006601!2.46e-32!102;UBERON:0000033!1.58e-27!63;UBERON:0001049!5.83e-26!52;UBERON:0005068!5.83e-26!52;UBERON:0006241!5.83e-26!52;UBERON:0007135!5.83e-26!52;UBERON:0000955!4.14e-25!50;UBERON:0006238!4.14e-25!50;UBERON:0002616!2.11e-24!49;UBERON:0003056!1.11e-23!49;UBERON:0003080!1.56e-20!40;UBERON:0002780!6.04e-20!39;UBERON:0001890!6.04e-20!39;UBERON:0006240!6.04e-20!39;UBERON:0002020!1.47e-15!34;UBERON:0007811!1.07e-14!86;UBERON:0002791!4.14e-13!29;UBERON:0003528!4.14e-13!29;UBERON:0001893!4.14e-13!29;UBERON:0000153!9.73e-12!94;UBERON:0002021!8.11e-09!10;UBERON:0000411!8.11e-09!10;UBERON:0001950!8.11e-09!10;UBERON:0000956!9.28e-09!21;UBERON:0001869!9.28e-09!21;UBERON:0000203!9.28e-09!21;UBERON:0001894!4.90e-08!10;UBERON:0006222!4.90e-08!10;UBERON:0002619!1.47e-07!17;UBERON:0000007!4.50e-07!8;UBERON:0003296!4.50e-07!8;UBERON:0010133!4.50e-07!8;UBERON:0002410!5.73e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.66e-46,73;UBERON:0001016,9.65e-45,75;UBERON:0004121,6.15e-41,95;UBERON:0000924,6.15e-41,95;UBERON:0006601,6.15e-41,95;UBERON:0002346,3.10e-40,64;UBERON:0003075,3.10e-40,64;UBERON:0007284,3.10e-40,64;UBERON:0000073,3.86e-35,54;UBERON:0010371,1.13e-34,73;UBERON:0001049,2.43e-33,52;UBERON:0005068,2.43e-33,52;UBERON:0006241,2.43e-33,52;UBERON:0007135,2.43e-33,52;UBERON:0003056,1.85e-30,49;UBERON:0000955,9.81e-30,47;UBERON:0006238,9.81e-30,47;UBERON:0002616,1.07e-28,46;UBERON:0010314,1.27e-28,92;UBERON:0003080,2.80e-27,40;UBERON:0002780,2.19e-26,39;UBERON:0001890,2.19e-26,39;UBERON:0006240,2.19e-26,39;UBERON:0002020,7.50e-20,34;UBERON:0003528,3.76e-16,29;UBERON:0002791,3.76e-16,29;UBERON:0001893,3.76e-16,29;UBERON:0002021,8.14e-13,10;UBERON:0000411,8.14e-13,10;UBERON:0001950,8.14e-13,10;UBERON:0001894,1.32e-11,10;UBERON:0006222,1.32e-11,10;UBERON:0000007,4.05e-10,8;UBERON:0003296,4.05e-10,8;UBERON:0010133,4.05e-10,8;UBERON:0002410,5.88e-10,9;UBERON:0000956,9.73e-10,21;UBERON:0001869,9.73e-10,21;UBERON:0000203,9.73e-10,21;UBERON:0011216,1.28e-09,194;UBERON:0002619,7.75e-09,17;UBERON:0002420,4.15e-08,8;UBERON:0007245,4.15e-08,8;UBERON:0010009,4.15e-08,8;UBERON:0010011,4.15e-08,8;UBERON:0000454,4.15e-08,8;UBERON:0000025,9.38e-08,114;UBERON:0000010,1.08e-07,11;UBERON:0004111,5.00e-07,122 | |||
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|short_description=p1@uc008dbj.1 | |||
}} |
Revision as of 14:58, 13 September 2013
Short description: | p1@uc008dbj.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc008dbj.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:248 |
Association with transcript: | 36bp_to_uc008dbj.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.33e-20 | 33 |
neuronal stem cell | 3.33e-20 | 33 |
neuroblast | 3.33e-20 | 33 |
electrically signaling cell | 3.33e-20 | 33 |
electrically responsive cell | 1.15e-15 | 39 |
electrically active cell | 1.15e-15 | 39 |
neural cell | 2.25e-13 | 43 |
ectodermal cell | 7.18e-13 | 44 |
neurectodermal cell | 7.18e-13 | 44 |
CNS neuron (sensu Vertebrata) | 3.29e-11 | 23 |
neuroblast (sensu Vertebrata) | 3.29e-11 | 23 |
autonomic neuron | 5.88e-10 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.