FFCP PHASE1:Mm9::chr5:65928378..65928412,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=68552|HGNC=|MCL_coexpression_id=1|UniProt=D3YYP6|association_with_transcript=10bp_to_ENSMUST00000149167_5end|description=CAGE_peak_6_at_1110003E01Rik_5end|id=chr5:65928378..65928412,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,6.03e-09,23;CL:0000337,6.03e-09,23;CL:0002614,5.65e-08,3;CL:0002610,1.70e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!6.49e-20!71;UBERON:0003075!6.49e-20!71;UBERON:0007284!6.49e-20!71;UBERON:0001017!2.84e-19!73;UBERON:0005743!2.84e-19!73;UBERON:0000073!1.03e-18!75;UBERON:0001016!1.03e-18!75;UBERON:0001049!4.54e-18!52;UBERON:0005068!4.54e-18!52;UBERON:0006241!4.54e-18!52;UBERON:0007135!4.54e-18!52;UBERON:0000033!5.29e-18!63;UBERON:0004121!1.38e-17!102;UBERON:0000924!1.38e-17!102;UBERON:0006601!1.38e-17!102;UBERON:0000955!2.08e-17!50;UBERON:0006238!2.08e-17!50;UBERON:0002616!7.97e-17!49;UBERON:0007811!3.00e-15!86;UBERON:0003056!4.95e-15!49;UBERON:0000153!4.93e-14!94;UBERON:0003080!2.33e-13!40;UBERON:0002780!9.51e-13!39;UBERON:0001890!9.51e-13!39;UBERON:0006240!9.51e-13!39;UBERON:0002020!1.44e-12!34;UBERON:0002791!3.54e-10!29;UBERON:0003528!3.54e-10!29;UBERON:0001893!3.54e-10!29;UBERON:0002619!3.36e-08!17;UBERON:0002021!8.79e-08!10;UBERON:0000411!8.79e-08!10;UBERON:0001950!8.79e-08!10;UBERON:0000956!5.05e-07!21;UBERON:0001869!5.05e-07!21;UBERON:0000203!5.05e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.73e-32,54;UBERON:0001049,2.33e-28,52;UBERON:0005068,2.33e-28,52;UBERON:0006241,2.33e-28,52;UBERON:0007135,2.33e-28,52;UBERON:0001017,9.61e-27,73;UBERON:0001016,8.24e-26,75;UBERON:0002020,2.18e-23,34;UBERON:0000955,2.39e-23,47;UBERON:0006238,2.39e-23,47;UBERON:0002346,2.83e-23,64;UBERON:0003075,2.83e-23,64;UBERON:0007284,2.83e-23,64;UBERON:0002616,6.11e-22,46;UBERON:0004121,2.67e-21,95;UBERON:0000924,2.67e-21,95;UBERON:0006601,2.67e-21,95;UBERON:0002021,1.15e-20,10;UBERON:0000411,1.15e-20,10;UBERON:0001950,1.15e-20,10;UBERON:0010371,1.77e-19,73;UBERON:0003528,1.37e-18,29;UBERON:0002791,1.37e-18,29;UBERON:0001893,1.37e-18,29;UBERON:0003080,1.20e-17,40;UBERON:0002780,3.19e-16,39;UBERON:0001890,3.19e-16,39;UBERON:0006240,3.19e-16,39;UBERON:0003056,7.66e-15,49;UBERON:0010314,6.46e-14,92;UBERON:0002619,1.06e-13,17;UBERON:0000956,7.13e-13,21;UBERON:0001869,7.13e-13,21;UBERON:0000203,7.13e-13,21;UBERON:0003076,8.54e-12,12;UBERON:0003057,8.54e-12,12;UBERON:0002950,7.32e-10,4;UBERON:0001891,7.32e-10,4;UBERON:0009616,7.32e-10,4;UBERON:0010286,7.32e-10,4;UBERON:0004111,1.51e-09,122;UBERON:0000025,5.25e-09,114;UBERON:0002038,5.65e-08,3;UBERON:0009663,5.65e-08,3;UBERON:0009661,5.65e-08,3;UBERON:0000125,5.65e-08,3;UBERON:0002308,5.65e-08,3;UBERON:0002240,6.32e-08,6;UBERON:0005174,6.32e-08,6;UBERON:0001137,6.32e-08,6;UBERON:0004684,1.70e-07,3;UBERON:0002275,1.70e-07,3;UBERON:0002420,5.79e-07,8;UBERON:0007245,5.79e-07,8;UBERON:0010009,5.79e-07,8;UBERON:0010011,5.79e-07,8;UBERON:0000454,5.79e-07,8|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0.387369970324729,0.563154888606667,0,0.34243593645101,0.398860794976682,0.513602189793617,0.174840804837995,0,0.202475267389826,0.699561878128147,0.473193248037357,0.822686601634433,0.84877930359606,1.53077922271926,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0.288851619751275,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0.436050312760893,0.439372365468944,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,0.809265843438391,0,0,0.338844532069132,0,0,0,0,1.19840044207362,0.768436610643109,0,0.135005938331691,0.210324961351382,1.99955689082663,1.10434270475807,0.367472397644862,0.191690942036473,0.919218786610021,6.60695285996332,5.87361755191863,4.45458946443106,0.131886287730194,0.731901148819277,1.56274011167028,6.14202597803038,8.4414391504752,7.48711414106369,2.35702868378934,0.711858403995515,1.3047961207771,0,0.453429360640713,0.869593466105033,0.860423876981386,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0,0.517875767294343,0.29688427812965,0.346970653532272,0.304465478312141,0,0.150722640552623,0.23517741427141,0.502666365318702,0.494389935468748,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,1.75668478206928,1.67557365450764,0.255457055208591,0.239630249011841,0,0.127070227073065,5.24267237916879,5.94750783664214,0.753926112677186,6.43149984711423,4.85859368927628,4.57133698031032,3.56930778749067,0.101839363850316,0.373220911830279,0.758168275301024,0.631325567659422,0.260240885925407,0.689706313300419,0.540186389416048,0.452114453507145,0.340182495756639,0.384341160854549,0.468508622798644,1.03481348295606,0,0.189106080167819,0.351902248327898,0,0,1.0447564995665,0.205782136407943,0,0,0,0,0,0,0.36012412292203,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0.350296027101508,0.16455984991348,0,0,0,0.219550115291051,0.134206418760372,5.25724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| ||
|EntrezGene=68552 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=D3YYP6 | |||
|association_with_transcript=10bp_to_ENSMUST00000149167_5end | |||
|description=CAGE_peak_6_at_1110003E01Rik_5end | |||
|id=chr5:65928378..65928412,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.03e-09,23;CL:0000337,6.03e-09,23;CL:0002614,5.65e-08,3;CL:0002610,1.70e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.49e-20!71;UBERON:0003075!6.49e-20!71;UBERON:0007284!6.49e-20!71;UBERON:0001017!2.84e-19!73;UBERON:0005743!2.84e-19!73;UBERON:0000073!1.03e-18!75;UBERON:0001016!1.03e-18!75;UBERON:0001049!4.54e-18!52;UBERON:0005068!4.54e-18!52;UBERON:0006241!4.54e-18!52;UBERON:0007135!4.54e-18!52;UBERON:0000033!5.29e-18!63;UBERON:0004121!1.38e-17!102;UBERON:0000924!1.38e-17!102;UBERON:0006601!1.38e-17!102;UBERON:0000955!2.08e-17!50;UBERON:0006238!2.08e-17!50;UBERON:0002616!7.97e-17!49;UBERON:0007811!3.00e-15!86;UBERON:0003056!4.95e-15!49;UBERON:0000153!4.93e-14!94;UBERON:0003080!2.33e-13!40;UBERON:0002780!9.51e-13!39;UBERON:0001890!9.51e-13!39;UBERON:0006240!9.51e-13!39;UBERON:0002020!1.44e-12!34;UBERON:0002791!3.54e-10!29;UBERON:0003528!3.54e-10!29;UBERON:0001893!3.54e-10!29;UBERON:0002619!3.36e-08!17;UBERON:0002021!8.79e-08!10;UBERON:0000411!8.79e-08!10;UBERON:0001950!8.79e-08!10;UBERON:0000956!5.05e-07!21;UBERON:0001869!5.05e-07!21;UBERON:0000203!5.05e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.73e-32,54;UBERON:0001049,2.33e-28,52;UBERON:0005068,2.33e-28,52;UBERON:0006241,2.33e-28,52;UBERON:0007135,2.33e-28,52;UBERON:0001017,9.61e-27,73;UBERON:0001016,8.24e-26,75;UBERON:0002020,2.18e-23,34;UBERON:0000955,2.39e-23,47;UBERON:0006238,2.39e-23,47;UBERON:0002346,2.83e-23,64;UBERON:0003075,2.83e-23,64;UBERON:0007284,2.83e-23,64;UBERON:0002616,6.11e-22,46;UBERON:0004121,2.67e-21,95;UBERON:0000924,2.67e-21,95;UBERON:0006601,2.67e-21,95;UBERON:0002021,1.15e-20,10;UBERON:0000411,1.15e-20,10;UBERON:0001950,1.15e-20,10;UBERON:0010371,1.77e-19,73;UBERON:0003528,1.37e-18,29;UBERON:0002791,1.37e-18,29;UBERON:0001893,1.37e-18,29;UBERON:0003080,1.20e-17,40;UBERON:0002780,3.19e-16,39;UBERON:0001890,3.19e-16,39;UBERON:0006240,3.19e-16,39;UBERON:0003056,7.66e-15,49;UBERON:0010314,6.46e-14,92;UBERON:0002619,1.06e-13,17;UBERON:0000956,7.13e-13,21;UBERON:0001869,7.13e-13,21;UBERON:0000203,7.13e-13,21;UBERON:0003076,8.54e-12,12;UBERON:0003057,8.54e-12,12;UBERON:0002950,7.32e-10,4;UBERON:0001891,7.32e-10,4;UBERON:0009616,7.32e-10,4;UBERON:0010286,7.32e-10,4;UBERON:0004111,1.51e-09,122;UBERON:0000025,5.25e-09,114;UBERON:0002038,5.65e-08,3;UBERON:0009663,5.65e-08,3;UBERON:0009661,5.65e-08,3;UBERON:0000125,5.65e-08,3;UBERON:0002308,5.65e-08,3;UBERON:0002240,6.32e-08,6;UBERON:0005174,6.32e-08,6;UBERON:0001137,6.32e-08,6;UBERON:0004684,1.70e-07,3;UBERON:0002275,1.70e-07,3;UBERON:0002420,5.79e-07,8;UBERON:0007245,5.79e-07,8;UBERON:0010009,5.79e-07,8;UBERON:0010011,5.79e-07,8;UBERON:0000454,5.79e-07,8 | |||
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|short_description=p6@1110003E01Rik | |||
}} |
Revision as of 07:51, 14 September 2013
Short description: | p6@1110003E01Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_1110003E01Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 10bp_to_ENSMUST00000149167_5end |
EntrezGene: | 1110003E01Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.03e-09 | 23 |
neuroblast (sensu Vertebrata) | 6.03e-09 | 23 |
neuron of the substantia nigra | 5.65e-08 | 3 |
raphe nuclei neuron | 1.70e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.