FFCP PHASE1:Mm9::chr15:22966175..22966196,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=320865|HGNC=|MCL_coexpression_id=39|UniProt=|association_with_transcript=-13bp_to_ENSMUST00000170626_5end|description=CAGE_peak_2_at_Cdh18_5end|id=chr15:22966175..22966196,+|ontology_enrichment_celltype=CL:0000117!3.23e-09!23;CL:0000337!3.23e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,7.76e-11,23;CL:0000337,7.76e-11,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.40e-22!63;UBERON:0001049!4.53e-22!52;UBERON:0005068!4.53e-22!52;UBERON:0006241!4.53e-22!52;UBERON:0007135!4.53e-22!52;UBERON:0002346!5.62e-22!71;UBERON:0003075!5.62e-22!71;UBERON:0007284!5.62e-22!71;UBERON:0000955!9.96e-21!50;UBERON:0006238!9.96e-21!50;UBERON:0001017!3.28e-20!73;UBERON:0005743!3.28e-20!73;UBERON:0002616!7.38e-20!49;UBERON:0000073!8.57e-20!75;UBERON:0001016!8.57e-20!75;UBERON:0004121!1.44e-19!102;UBERON:0000924!1.44e-19!102;UBERON:0006601!1.44e-19!102;UBERON:0003056!8.59e-18!49;UBERON:0002020!1.18e-16!34;UBERON:0003080!7.63e-16!40;UBERON:0002780!4.62e-15!39;UBERON:0001890!4.62e-15!39;UBERON:0006240!4.62e-15!39;UBERON:0002791!3.14e-13!29;UBERON:0003528!3.14e-13!29;UBERON:0001893!3.14e-13!29;UBERON:0000153!7.08e-13!94;UBERON:0007811!4.38e-12!86;UBERON:0002021!1.85e-09!10;UBERON:0000411!1.85e-09!10;UBERON:0001950!1.85e-09!10;UBERON:0000956!1.68e-08!21;UBERON:0001869!1.68e-08!21;UBERON:0000203!1.68e-08!21;UBERON:0002619!1.82e-08!17;UBERON:0003076!5.92e-07!12;UBERON:0003057!5.92e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.23e-38,54;UBERON:0001049,3.66e-35,52;UBERON:0005068,3.66e-35,52;UBERON:0006241,3.66e-35,52;UBERON:0007135,3.66e-35,52;UBERON:0001017,6.54e-32,73;UBERON:0001016,8.17e-31,75;UBERON:0002346,7.30e-29,64;UBERON:0003075,7.30e-29,64;UBERON:0007284,7.30e-29,64;UBERON:0000955,7.00e-28,47;UBERON:0006238,7.00e-28,47;UBERON:0002616,3.43e-26,46;UBERON:0010371,7.60e-26,73;UBERON:0004121,2.74e-25,95;UBERON:0000924,2.74e-25,95;UBERON:0006601,2.74e-25,95;UBERON:0002020,4.07e-25,34;UBERON:0003080,4.12e-21,40;UBERON:0002780,1.31e-19,39;UBERON:0001890,1.31e-19,39;UBERON:0006240,1.31e-19,39;UBERON:0002021,1.95e-19,10;UBERON:0000411,1.95e-19,10;UBERON:0001950,1.95e-19,10;UBERON:0010314,1.05e-18,92;UBERON:0003528,4.13e-18,29;UBERON:0002791,4.13e-18,29;UBERON:0001893,4.13e-18,29;UBERON:0003056,1.02e-17,49;UBERON:0003076,3.00e-15,12;UBERON:0003057,3.00e-15,12;UBERON:0002619,1.26e-12,17;UBERON:0000956,1.14e-11,21;UBERON:0001869,1.14e-11,21;UBERON:0000203,1.14e-11,21;UBERON:0000025,1.69e-11,114;UBERON:0004111,4.72e-11,122;UBERON:0002240,5.96e-11,6;UBERON:0005174,5.96e-11,6;UBERON:0001137,5.96e-11,6;UBERON:0001948,4.67e-09,5;UBERON:0002315,4.67e-09,5;UBERON:0011216,7.36e-09,194;UBERON:0002950,4.26e-08,4;UBERON:0001891,4.26e-08,4;UBERON:0009616,4.26e-08,4;UBERON:0010286,4.26e-08,4;UBERON:0002420,7.27e-08,8;UBERON:0007245,7.27e-08,8;UBERON:0010009,7.27e-08,8;UBERON:0010011,7.27e-08,8;UBERON:0000454,7.27e-08,8|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.101376931219515,0.917733760808408,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.809265843438391,2.64495489636016,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,1.42825492201902,1.32521124570968,0.489963196859816,0.191690942036473,0,1.10115880999389,3.83062014255563,5.37622866396852,0.527545150920775,1.55528994124096,0.52091337055676,4.4669279840221,2.25105044012672,1.83357897332172,2.94628585473668,4.12877874317399,2.23679334990361,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,1.12674735821344,1.28326477414318,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0.304465478312141,0,0.150722640552623,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,11.1256702864388,15.7085030110091,0,0,0,0,5.09288173976397,4.11750542536764,1.38219787324151,3.99795936442236,4.34716277461562,5.40248915854856,4.54275536589721,0.203678727700633,0,0,0.420883711772948,0,0,0.900310649026746,0.452114453507145,0.884474488967262,0.512454881139399,0.843315521037559,2.06962696591213,0,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0,2.52347938276953,0.308713837137853,0,0,0.213288250535234,0,0.515469845288373,0,0,0.380451252225118,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58257418949947,4.33683240391152,0,0,0,0.390438744296638,0,0,0,0,0,0.292255857911312,0,7.06906896127976,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,5.7874732978144,0,0,0.428674070063185,0.532020700926821,0.713475270408282,1.15184314421485,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0.328281799490123,0,6.11903496634682,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.813277868507395,1.18805874903981,0.418176592028937,1.09181281873089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| ||
|EntrezGene=320865 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|UniProt= | |||
|association_with_transcript=-13bp_to_ENSMUST00000170626_5end | |||
|description=CAGE_peak_2_at_Cdh18_5end | |||
|id=chr15:22966175..22966196,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.23e-09!23;CL:0000337!3.23e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.76e-11,23;CL:0000337,7.76e-11,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.40e-22!63;UBERON:0001049!4.53e-22!52;UBERON:0005068!4.53e-22!52;UBERON:0006241!4.53e-22!52;UBERON:0007135!4.53e-22!52;UBERON:0002346!5.62e-22!71;UBERON:0003075!5.62e-22!71;UBERON:0007284!5.62e-22!71;UBERON:0000955!9.96e-21!50;UBERON:0006238!9.96e-21!50;UBERON:0001017!3.28e-20!73;UBERON:0005743!3.28e-20!73;UBERON:0002616!7.38e-20!49;UBERON:0000073!8.57e-20!75;UBERON:0001016!8.57e-20!75;UBERON:0004121!1.44e-19!102;UBERON:0000924!1.44e-19!102;UBERON:0006601!1.44e-19!102;UBERON:0003056!8.59e-18!49;UBERON:0002020!1.18e-16!34;UBERON:0003080!7.63e-16!40;UBERON:0002780!4.62e-15!39;UBERON:0001890!4.62e-15!39;UBERON:0006240!4.62e-15!39;UBERON:0002791!3.14e-13!29;UBERON:0003528!3.14e-13!29;UBERON:0001893!3.14e-13!29;UBERON:0000153!7.08e-13!94;UBERON:0007811!4.38e-12!86;UBERON:0002021!1.85e-09!10;UBERON:0000411!1.85e-09!10;UBERON:0001950!1.85e-09!10;UBERON:0000956!1.68e-08!21;UBERON:0001869!1.68e-08!21;UBERON:0000203!1.68e-08!21;UBERON:0002619!1.82e-08!17;UBERON:0003076!5.92e-07!12;UBERON:0003057!5.92e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.23e-38,54;UBERON:0001049,3.66e-35,52;UBERON:0005068,3.66e-35,52;UBERON:0006241,3.66e-35,52;UBERON:0007135,3.66e-35,52;UBERON:0001017,6.54e-32,73;UBERON:0001016,8.17e-31,75;UBERON:0002346,7.30e-29,64;UBERON:0003075,7.30e-29,64;UBERON:0007284,7.30e-29,64;UBERON:0000955,7.00e-28,47;UBERON:0006238,7.00e-28,47;UBERON:0002616,3.43e-26,46;UBERON:0010371,7.60e-26,73;UBERON:0004121,2.74e-25,95;UBERON:0000924,2.74e-25,95;UBERON:0006601,2.74e-25,95;UBERON:0002020,4.07e-25,34;UBERON:0003080,4.12e-21,40;UBERON:0002780,1.31e-19,39;UBERON:0001890,1.31e-19,39;UBERON:0006240,1.31e-19,39;UBERON:0002021,1.95e-19,10;UBERON:0000411,1.95e-19,10;UBERON:0001950,1.95e-19,10;UBERON:0010314,1.05e-18,92;UBERON:0003528,4.13e-18,29;UBERON:0002791,4.13e-18,29;UBERON:0001893,4.13e-18,29;UBERON:0003056,1.02e-17,49;UBERON:0003076,3.00e-15,12;UBERON:0003057,3.00e-15,12;UBERON:0002619,1.26e-12,17;UBERON:0000956,1.14e-11,21;UBERON:0001869,1.14e-11,21;UBERON:0000203,1.14e-11,21;UBERON:0000025,1.69e-11,114;UBERON:0004111,4.72e-11,122;UBERON:0002240,5.96e-11,6;UBERON:0005174,5.96e-11,6;UBERON:0001137,5.96e-11,6;UBERON:0001948,4.67e-09,5;UBERON:0002315,4.67e-09,5;UBERON:0011216,7.36e-09,194;UBERON:0002950,4.26e-08,4;UBERON:0001891,4.26e-08,4;UBERON:0009616,4.26e-08,4;UBERON:0010286,4.26e-08,4;UBERON:0002420,7.27e-08,8;UBERON:0007245,7.27e-08,8;UBERON:0010009,7.27e-08,8;UBERON:0010011,7.27e-08,8;UBERON:0000454,7.27e-08,8 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.101376931219515,0.917733760808408,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.809265843438391,2.64495489636016,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,1.42825492201902,1.32521124570968,0.489963196859816,0.191690942036473,0,1.10115880999389,3.83062014255563,5.37622866396852,0.527545150920775,1.55528994124096,0.52091337055676,4.4669279840221,2.25105044012672,1.83357897332172,2.94628585473668,4.12877874317399,2.23679334990361,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,1.12674735821344,1.28326477414318,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0.304465478312141,0,0.150722640552623,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,11.1256702864388,15.7085030110091,0,0,0,0,5.09288173976397,4.11750542536764,1.38219787324151,3.99795936442236,4.34716277461562,5.40248915854856,4.54275536589721,0.203678727700633,0,0,0.420883711772948,0,0,0.900310649026746,0.452114453507145,0.884474488967262,0.512454881139399,0.843315521037559,2.06962696591213,0,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0,2.52347938276953,0.308713837137853,0,0,0.213288250535234,0,0.515469845288373,0,0,0.380451252225118,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58257418949947,4.33683240391152,0,0,0,0.390438744296638,0,0,0,0,0,0.292255857911312,0,7.06906896127976,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,5.7874732978144,0,0,0.428674070063185,0.532020700926821,0.713475270408282,1.15184314421485,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0.328281799490123,0,6.11903496634682,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.813277868507395,1.18805874903981,0.418176592028937,1.09181281873089,0.674321731924103,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,7.90652579663893,8.74617949363636,4.01026859407578,3.78077001156113,6.16574267793578,9.06472676867641,3.37511250115903,3.60256962579376,3.17199686288943,4.65984280576638,0,0.399024873401031,0.341467211508268,0,0,0.367687016900028,0,0.618105171716683,0,0.758091635291392,0.50695859978048,0.565879024158229,0.561849044819294,0.768301828858431,0.402048282689293,0.476293691283074,0.695305955669133,0.77163688185482,0.824171801606613,0.735994600671987,0.342869252385415,0.177475806159338,0.715308569841963,0.436039249896986,0.846984423737976,0.507687647350059,0.365855945745545,1.05227884575137,0.950628796921032,1.12228454331548,0.593175090620871,0.0985044823755635,0.818462086339379,1.08455788830176,0.192906610981141,0,0.467863216890817,0.429742108096597,0.956441660344217,0.661774257358546,0.231867835620421 | |||
|short_description=p2@Cdh18 | |||
}} |
Revision as of 10:15, 13 September 2013
Short description: | p2@Cdh18 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cdh18_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | -13bp_to_ENSMUST00000170626_5end |
EntrezGene: | Cdh18 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.76e-11 | 23 |
neuroblast (sensu Vertebrata) | 7.76e-11 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.