FFCP PHASE1:Mm9::chr11:30167616..30167628,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20742|HGNC=|MCL_coexpression_id=1|UniProt=Q62261|association_with_transcript=-402bp_to_ENSMUST00000124231_5end|description=CAGE_peak_12_at_Spnb2_5end|id=chr11:30167616..30167628,-|ontology_enrichment_celltype=CL:0000393!3.68e-11!39;CL:0000211!3.68e-11!39;CL:0000540!8.11e-11!33;CL:0000047!8.11e-11!33;CL:0000031!8.11e-11!33;CL:0000404!8.11e-11!33;CL:0000117!9.65e-08!23;CL:0000337!9.65e-08!23;CL:0000055!3.99e-07!50;CL:0002319!5.18e-07!43;CL:0000221!8.45e-07!44;CL:0000133!8.45e-07!44|ontology_enrichment_celltype_v019_2=CL:0000540,1.55e-08,33;CL:0000047,1.55e-08,33;CL:0000031,1.55e-08,33;CL:0000404,1.55e-08,33;CL:0000117,1.48e-07,23;CL:0000337,1.48e-07,23;CL:0000393,1.78e-07,39;CL:0000211,1.78e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.48e-21!102;UBERON:0000924!4.48e-21!102;UBERON:0006601!4.48e-21!102;UBERON:0000073!5.89e-21!75;UBERON:0001016!5.89e-21!75;UBERON:0001017!4.44e-20!73;UBERON:0005743!4.44e-20!73;UBERON:0002346!4.14e-19!71;UBERON:0003075!4.14e-19!71;UBERON:0007284!4.14e-19!71;UBERON:0000033!4.14e-17!63;UBERON:0001049!9.66e-17!52;UBERON:0005068!9.66e-17!52;UBERON:0006241!9.66e-17!52;UBERON:0007135!9.66e-17!52;UBERON:0000955!4.06e-16!50;UBERON:0006238!4.06e-16!50;UBERON:0002616!1.30e-15!49;UBERON:0003056!3.60e-15!49;UBERON:0002020!1.43e-13!34;UBERON:0003080!3.42e-13!40;UBERON:0000025!5.14e-13!114;UBERON:0002780!1.46e-12!39;UBERON:0001890!1.46e-12!39;UBERON:0006240!1.46e-12!39;UBERON:0004111!8.16e-12!122;UBERON:0002791!3.97e-11!29;UBERON:0003528!3.97e-11!29;UBERON:0001893!3.97e-11!29;UBERON:0002021!5.59e-08!10;UBERON:0000411!5.59e-08!10;UBERON:0001950!5.59e-08!10;UBERON:0000956!1.61e-07!21;UBERON:0001869!1.61e-07!21;UBERON:0000203!1.61e-07!21;UBERON:0002619!2.27e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.47e-29,54;UBERON:0001016,1.67e-28,75;UBERON:0001017,4.28e-28,73;UBERON:0001049,2.20e-26,52;UBERON:0005068,2.20e-26,52;UBERON:0006241,2.20e-26,52;UBERON:0007135,2.20e-26,52;UBERON:0002346,2.85e-24,64;UBERON:0003075,2.85e-24,64;UBERON:0007284,2.85e-24,64;UBERON:0004121,6.69e-24,95;UBERON:0000924,6.69e-24,95;UBERON:0006601,6.69e-24,95;UBERON:0000955,2.83e-22,47;UBERON:0006238,2.83e-22,47;UBERON:0010371,2.36e-21,73;UBERON:0002616,2.93e-21,46;UBERON:0002020,1.59e-20,34;UBERON:0010314,2.83e-20,92;UBERON:0003080,2.91e-18,40;UBERON:0002780,5.00e-17,39;UBERON:0001890,5.00e-17,39;UBERON:0006240,5.00e-17,39;UBERON:0003528,1.26e-16,29;UBERON:0002791,1.26e-16,29;UBERON:0001893,1.26e-16,29;UBERON:0003056,2.48e-16,49;UBERON:0002021,3.80e-16,10;UBERON:0000411,3.80e-16,10;UBERON:0001950,3.80e-16,10;UBERON:0000025,5.20e-13,114;UBERON:0002619,2.17e-12,17;UBERON:0004111,1.90e-11,122;UBERON:0000956,3.34e-11,21;UBERON:0001869,3.34e-11,21;UBERON:0000203,3.34e-11,21;UBERON:0003076,9.68e-09,12;UBERON:0003057,9.68e-09,12;UBERON:0000483,3.43e-07,174;UBERON:0002950,5.14e-07,4;UBERON:0001891,5.14e-07,4;UBERON:0009616,5.14e-07,4;UBERON:0010286,5.14e-07,4;UBERON:0000119,5.52e-07,176;UBERON:0002420,9.23e-07,8;UBERON:0007245,9.23e-07,8;UBERON:0010009,9.23e-07,8;UBERON:0010011,9.23e-07,8;UBERON:0000454,9.23e-07,8|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.405507724878058,0.550640256485045,0,0,0,0,0,0,0,0,0,0.514518872071894,0.573066879877513,1.03134418455488,0.809265843438391,0.528990979272033,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0.103689612308478,0.540023753326763,0.420649922702764,1.14260393761521,0.662605622854841,0.367472397644862,0.958454710182364,0.919218786610021,3.30347642998166,1.91531007127782,3.99376986466233,0.395658863190582,2.01272815925301,1.56274011167028,2.79182999001381,1.68828783009504,2.29197371665215,2.94628585473668,1.70846016958924,2.42319279572891,0.908714319998209,1.058001841495,0.579728977403356,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.452167921657868,0.587943535678524,0.502666365318702,0.741584903203122,0.289198713839823,0,0.647067399789637,0.220841518460394,0,0,1.75668478206928,1.04723353406728,0,0,0,0,2.84602214869163,0.915001205637253,2.51308704225729,2.43354048269187,3.58001640262463,2.0778804455956,2.75810147215188,0.305518091550949,0.248813941220186,0,0.420883711772948,0.260240885925407,0.689706313300419,1.0803727788321,0.90422890701429,0.816437989815934,0.512454881139399,0.562210347358373,2.06962696591213,0,0.189106080167819,0,0.219195732427575,0,1.0447564995665,0.205782136407943,0.199034266818493,0,0.257347907114715,0,1.24275463521301,1.17263029990548,0.36012412292203,1.18372367792605,1.57411385397923,0.925602677324269,0.697601834251224,0.536546802799238,1.16765342367169,0.987359099480883,0.32833492815819,0.486412857275134,0.292399974850665,0.219550115291051,0.402619256281115,3.57492912559016,1.85228302282712,0,0,0,0.232236671860439,0.257734922644187,0.806734098493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| ||
|EntrezGene=20742 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q62261 | |||
|association_with_transcript=-402bp_to_ENSMUST00000124231_5end | |||
|description=CAGE_peak_12_at_Spnb2_5end | |||
|id=chr11:30167616..30167628,- | |||
|ontology_enrichment_celltype=CL:0000393!3.68e-11!39;CL:0000211!3.68e-11!39;CL:0000540!8.11e-11!33;CL:0000047!8.11e-11!33;CL:0000031!8.11e-11!33;CL:0000404!8.11e-11!33;CL:0000117!9.65e-08!23;CL:0000337!9.65e-08!23;CL:0000055!3.99e-07!50;CL:0002319!5.18e-07!43;CL:0000221!8.45e-07!44;CL:0000133!8.45e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.55e-08,33;CL:0000047,1.55e-08,33;CL:0000031,1.55e-08,33;CL:0000404,1.55e-08,33;CL:0000117,1.48e-07,23;CL:0000337,1.48e-07,23;CL:0000393,1.78e-07,39;CL:0000211,1.78e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.48e-21!102;UBERON:0000924!4.48e-21!102;UBERON:0006601!4.48e-21!102;UBERON:0000073!5.89e-21!75;UBERON:0001016!5.89e-21!75;UBERON:0001017!4.44e-20!73;UBERON:0005743!4.44e-20!73;UBERON:0002346!4.14e-19!71;UBERON:0003075!4.14e-19!71;UBERON:0007284!4.14e-19!71;UBERON:0000033!4.14e-17!63;UBERON:0001049!9.66e-17!52;UBERON:0005068!9.66e-17!52;UBERON:0006241!9.66e-17!52;UBERON:0007135!9.66e-17!52;UBERON:0000955!4.06e-16!50;UBERON:0006238!4.06e-16!50;UBERON:0002616!1.30e-15!49;UBERON:0003056!3.60e-15!49;UBERON:0002020!1.43e-13!34;UBERON:0003080!3.42e-13!40;UBERON:0000025!5.14e-13!114;UBERON:0002780!1.46e-12!39;UBERON:0001890!1.46e-12!39;UBERON:0006240!1.46e-12!39;UBERON:0004111!8.16e-12!122;UBERON:0002791!3.97e-11!29;UBERON:0003528!3.97e-11!29;UBERON:0001893!3.97e-11!29;UBERON:0002021!5.59e-08!10;UBERON:0000411!5.59e-08!10;UBERON:0001950!5.59e-08!10;UBERON:0000956!1.61e-07!21;UBERON:0001869!1.61e-07!21;UBERON:0000203!1.61e-07!21;UBERON:0002619!2.27e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.47e-29,54;UBERON:0001016,1.67e-28,75;UBERON:0001017,4.28e-28,73;UBERON:0001049,2.20e-26,52;UBERON:0005068,2.20e-26,52;UBERON:0006241,2.20e-26,52;UBERON:0007135,2.20e-26,52;UBERON:0002346,2.85e-24,64;UBERON:0003075,2.85e-24,64;UBERON:0007284,2.85e-24,64;UBERON:0004121,6.69e-24,95;UBERON:0000924,6.69e-24,95;UBERON:0006601,6.69e-24,95;UBERON:0000955,2.83e-22,47;UBERON:0006238,2.83e-22,47;UBERON:0010371,2.36e-21,73;UBERON:0002616,2.93e-21,46;UBERON:0002020,1.59e-20,34;UBERON:0010314,2.83e-20,92;UBERON:0003080,2.91e-18,40;UBERON:0002780,5.00e-17,39;UBERON:0001890,5.00e-17,39;UBERON:0006240,5.00e-17,39;UBERON:0003528,1.26e-16,29;UBERON:0002791,1.26e-16,29;UBERON:0001893,1.26e-16,29;UBERON:0003056,2.48e-16,49;UBERON:0002021,3.80e-16,10;UBERON:0000411,3.80e-16,10;UBERON:0001950,3.80e-16,10;UBERON:0000025,5.20e-13,114;UBERON:0002619,2.17e-12,17;UBERON:0004111,1.90e-11,122;UBERON:0000956,3.34e-11,21;UBERON:0001869,3.34e-11,21;UBERON:0000203,3.34e-11,21;UBERON:0003076,9.68e-09,12;UBERON:0003057,9.68e-09,12;UBERON:0000483,3.43e-07,174;UBERON:0002950,5.14e-07,4;UBERON:0001891,5.14e-07,4;UBERON:0009616,5.14e-07,4;UBERON:0010286,5.14e-07,4;UBERON:0000119,5.52e-07,176;UBERON:0002420,9.23e-07,8;UBERON:0007245,9.23e-07,8;UBERON:0010009,9.23e-07,8;UBERON:0010011,9.23e-07,8;UBERON:0000454,9.23e-07,8 | |||
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|short_description=p12@Spnb2 | |||
}} |
Revision as of 19:23, 12 September 2013
Short description: | p12@Spnb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Spnb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -402bp_to_ENSMUST00000124231_5end |
EntrezGene: | Spnb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.55e-08 | 33 |
neuronal stem cell | 1.55e-08 | 33 |
neuroblast | 1.55e-08 | 33 |
electrically signaling cell | 1.55e-08 | 33 |
CNS neuron (sensu Vertebrata) | 1.48e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.48e-07 | 23 |
electrically responsive cell | 1.78e-07 | 39 |
electrically active cell | 1.78e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.