FFCP PHASE1:Mm9::chr9:59465091..59465108,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67287|HGNC=|MCL_coexpression_id=13|UniProt=G5E856,Q6P6P7|association_with_transcript=0bp_to_ENSMUST00000026267,ENSMUST00000050483,NM_001205239,NM_029922,NR_038074,NR_038075,uc009pxz.1,uc009pya.1,uc009pyb.1,uc009pyc.1_5end|description=CAGE_peak_3_at_Parp6_5end|id=chr9:59465091..59465108,+|ontology_enrichment_celltype=CL:0000117!3.03e-15!23;CL:0000337!3.03e-15!23;CL:0000540!1.34e-14!33;CL:0000047!1.34e-14!33;CL:0000031!1.34e-14!33;CL:0000404!1.34e-14!33;CL:0000393!2.29e-09!39;CL:0000211!2.29e-09!39;CL:0000221!2.04e-08!44;CL:0000133!2.04e-08!44;CL:0002319!2.20e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,5.99e-25,23;CL:0000337,5.99e-25,23;CL:0000540,6.04e-16,33;CL:0000047,6.04e-16,33;CL:0000031,6.04e-16,33;CL:0000404,6.04e-16,33;CL:0000393,3.32e-12,39;CL:0000211,3.32e-12,39;CL:0002319,2.52e-10,43;CL:0000221,6.50e-10,44;CL:0000133,6.50e-10,44;CL:0002609,1.15e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.35e-24!73;UBERON:0005743!3.35e-24!73;UBERON:0000033!2.16e-23!63;UBERON:0002346!2.37e-23!71;UBERON:0003075!2.37e-23!71;UBERON:0007284!2.37e-23!71;UBERON:0004121!2.58e-23!102;UBERON:0000924!2.58e-23!102;UBERON:0006601!2.58e-23!102;UBERON:0000073!5.05e-23!75;UBERON:0001016!5.05e-23!75;UBERON:0001049!1.60e-22!52;UBERON:0005068!1.60e-22!52;UBERON:0006241!1.60e-22!52;UBERON:0007135!1.60e-22!52;UBERON:0000955!3.92e-21!50;UBERON:0006238!3.92e-21!50;UBERON:0002616!1.48e-20!49;UBERON:0003056!3.73e-20!49;UBERON:0002020!1.63e-18!34;UBERON:0003080!3.34e-18!40;UBERON:0002780!1.28e-17!39;UBERON:0001890!1.28e-17!39;UBERON:0006240!1.28e-17!39;UBERON:0007811!4.64e-16!86;UBERON:0000153!5.08e-16!94;UBERON:0002791!2.13e-15!29;UBERON:0003528!2.13e-15!29;UBERON:0001893!2.13e-15!29;UBERON:0000956!1.06e-10!21;UBERON:0001869!1.06e-10!21;UBERON:0000203!1.06e-10!21;UBERON:0002619!2.39e-08!17;UBERON:0002021!4.39e-07!10;UBERON:0000411!4.39e-07!10;UBERON:0001950!4.39e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.97e-35,54;UBERON:0001049,1.00e-32,52;UBERON:0005068,1.00e-32,52;UBERON:0006241,1.00e-32,52;UBERON:0007135,1.00e-32,52;UBERON:0002020,3.99e-31,34;UBERON:0002346,1.03e-30,64;UBERON:0003075,1.03e-30,64;UBERON:0007284,1.03e-30,64;UBERON:0001017,1.15e-30,73;UBERON:0001016,2.23e-29,75;UBERON:0000955,1.63e-27,47;UBERON:0006238,1.63e-27,47;UBERON:0002616,1.41e-26,46;UBERON:0003528,9.17e-26,29;UBERON:0002791,9.17e-26,29;UBERON:0001893,9.17e-26,29;UBERON:0003056,5.02e-25,49;UBERON:0004121,5.60e-25,95;UBERON:0000924,5.60e-25,95;UBERON:0006601,5.60e-25,95;UBERON:0010371,6.73e-25,73;UBERON:0003080,7.25e-25,40;UBERON:0002780,6.57e-24,39;UBERON:0001890,6.57e-24,39;UBERON:0006240,6.57e-24,39;UBERON:0000956,1.08e-17,21;UBERON:0001869,1.08e-17,21;UBERON:0000203,1.08e-17,21;UBERON:0010314,2.73e-17,92;UBERON:0002619,1.18e-13,17;UBERON:0002021,5.27e-11,10;UBERON:0000411,5.27e-11,10;UBERON:0001950,5.27e-11,10;UBERON:0002420,3.56e-09,8;UBERON:0007245,3.56e-09,8;UBERON:0010009,3.56e-09,8;UBERON:0010011,3.56e-09,8;UBERON:0000454,3.56e-09,8;UBERON:0003076,4.14e-08,12;UBERON:0003057,4.14e-08,12;UBERON:0000025,2.26e-07,114;UBERON:0002240,3.74e-07,6;UBERON:0005174,3.74e-07,6;UBERON:0001137,3.74e-07,6;UBERON:0000369,6.12e-07,5;UBERON:0002435,6.12e-07,5;UBERON:0000204,6.12e-07,5;UBERON:0010082,6.12e-07,5|phase1_expression=0.480446541314382,0,0,0,0,0.33575854382378,0,0.258246646883153,0,0.468129052643987,0.34243593645101,0.478632953972018,0.171200729931206,0.611942816932982,0,0,0,0,0.274228867211478,0.42438965179803,0.765389611359628,0,0.522399578277871,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0.635030673459631,0,0,0,0,0.204169356262369,0,0,0,0,0,0.485510353031154,0,0,0,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0.503347818173209,0.725362142011344,0.336093799142464,0,0,0,12.1389876515759,6.87688273053643,14.5781222806421,0,0,0,0,0,0,0,5.08079100311541,6.21027316325777,5.67877395648731,4.85606673486466,3.53389665522582,6.24703075996266,4.2172007248024,7.35375029288017,5.50579404996943,2.68143409978894,4.91540906419979,13.8480602116704,12.5338071735301,8.33461392890816,2.51264699101243,2.8138130501584,3.51435969886663,5.59794312399969,5.55249555116501,8.94717339961443,0,0.226714680320357,0,0,0,0,0,0,0,0.170430322578058,0,0,0.422530259330042,0,0,0,0,0.253359865475099,0,0.11418387971906,0.517875767294343,0,1.21439728736295,0,0.691846491768175,0.60289056221049,0.705532242814229,0.125666591329675,0,0,0,0.485300549842228,0,0.484875253135222,0,2.34224637609238,3.56059401582874,0,0,0,0.381210681219194,4.34392854273986,2.74500361691176,6.78533501409468,5.04090528557602,5.11430914660661,3.1168206683934,4.2182728397617,0.101839363850316,0.497627882440372,0,0.841767423545896,0.260240885925407,0.459804208866946,1.80062129805349,1.65775299619287,2.24520447199382,2.43416068541215,2.24884138943349,0.517406741478031,0,0.945530400839096,0.527853372491847,0.219195732427575,0.556094498451196,0.348252166522167,0.411564272815887,0.398068533636986,0,0.257347907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| ||
|EntrezGene=67287 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=G5E856,Q6P6P7 | |||
|association_with_transcript=0bp_to_ENSMUST00000026267,ENSMUST00000050483,NM_001205239,NM_029922,NR_038074,NR_038075,uc009pxz.1,uc009pya.1,uc009pyb.1,uc009pyc.1_5end | |||
|description=CAGE_peak_3_at_Parp6_5end | |||
|id=chr9:59465091..59465108,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.03e-15!23;CL:0000337!3.03e-15!23;CL:0000540!1.34e-14!33;CL:0000047!1.34e-14!33;CL:0000031!1.34e-14!33;CL:0000404!1.34e-14!33;CL:0000393!2.29e-09!39;CL:0000211!2.29e-09!39;CL:0000221!2.04e-08!44;CL:0000133!2.04e-08!44;CL:0002319!2.20e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.99e-25,23;CL:0000337,5.99e-25,23;CL:0000540,6.04e-16,33;CL:0000047,6.04e-16,33;CL:0000031,6.04e-16,33;CL:0000404,6.04e-16,33;CL:0000393,3.32e-12,39;CL:0000211,3.32e-12,39;CL:0002319,2.52e-10,43;CL:0000221,6.50e-10,44;CL:0000133,6.50e-10,44;CL:0002609,1.15e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.35e-24!73;UBERON:0005743!3.35e-24!73;UBERON:0000033!2.16e-23!63;UBERON:0002346!2.37e-23!71;UBERON:0003075!2.37e-23!71;UBERON:0007284!2.37e-23!71;UBERON:0004121!2.58e-23!102;UBERON:0000924!2.58e-23!102;UBERON:0006601!2.58e-23!102;UBERON:0000073!5.05e-23!75;UBERON:0001016!5.05e-23!75;UBERON:0001049!1.60e-22!52;UBERON:0005068!1.60e-22!52;UBERON:0006241!1.60e-22!52;UBERON:0007135!1.60e-22!52;UBERON:0000955!3.92e-21!50;UBERON:0006238!3.92e-21!50;UBERON:0002616!1.48e-20!49;UBERON:0003056!3.73e-20!49;UBERON:0002020!1.63e-18!34;UBERON:0003080!3.34e-18!40;UBERON:0002780!1.28e-17!39;UBERON:0001890!1.28e-17!39;UBERON:0006240!1.28e-17!39;UBERON:0007811!4.64e-16!86;UBERON:0000153!5.08e-16!94;UBERON:0002791!2.13e-15!29;UBERON:0003528!2.13e-15!29;UBERON:0001893!2.13e-15!29;UBERON:0000956!1.06e-10!21;UBERON:0001869!1.06e-10!21;UBERON:0000203!1.06e-10!21;UBERON:0002619!2.39e-08!17;UBERON:0002021!4.39e-07!10;UBERON:0000411!4.39e-07!10;UBERON:0001950!4.39e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.97e-35,54;UBERON:0001049,1.00e-32,52;UBERON:0005068,1.00e-32,52;UBERON:0006241,1.00e-32,52;UBERON:0007135,1.00e-32,52;UBERON:0002020,3.99e-31,34;UBERON:0002346,1.03e-30,64;UBERON:0003075,1.03e-30,64;UBERON:0007284,1.03e-30,64;UBERON:0001017,1.15e-30,73;UBERON:0001016,2.23e-29,75;UBERON:0000955,1.63e-27,47;UBERON:0006238,1.63e-27,47;UBERON:0002616,1.41e-26,46;UBERON:0003528,9.17e-26,29;UBERON:0002791,9.17e-26,29;UBERON:0001893,9.17e-26,29;UBERON:0003056,5.02e-25,49;UBERON:0004121,5.60e-25,95;UBERON:0000924,5.60e-25,95;UBERON:0006601,5.60e-25,95;UBERON:0010371,6.73e-25,73;UBERON:0003080,7.25e-25,40;UBERON:0002780,6.57e-24,39;UBERON:0001890,6.57e-24,39;UBERON:0006240,6.57e-24,39;UBERON:0000956,1.08e-17,21;UBERON:0001869,1.08e-17,21;UBERON:0000203,1.08e-17,21;UBERON:0010314,2.73e-17,92;UBERON:0002619,1.18e-13,17;UBERON:0002021,5.27e-11,10;UBERON:0000411,5.27e-11,10;UBERON:0001950,5.27e-11,10;UBERON:0002420,3.56e-09,8;UBERON:0007245,3.56e-09,8;UBERON:0010009,3.56e-09,8;UBERON:0010011,3.56e-09,8;UBERON:0000454,3.56e-09,8;UBERON:0003076,4.14e-08,12;UBERON:0003057,4.14e-08,12;UBERON:0000025,2.26e-07,114;UBERON:0002240,3.74e-07,6;UBERON:0005174,3.74e-07,6;UBERON:0001137,3.74e-07,6;UBERON:0000369,6.12e-07,5;UBERON:0002435,6.12e-07,5;UBERON:0000204,6.12e-07,5;UBERON:0010082,6.12e-07,5 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0.33575854382378,0,0.258246646883153,0,0.468129052643987,0.34243593645101,0.478632953972018,0.171200729931206,0.611942816932982,0,0,0,0,0.274228867211478,0.42438965179803,0.765389611359628,0,0.522399578277871,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0.635030673459631,0,0,0,0,0.204169356262369,0,0,0,0,0,0.485510353031154,0,0,0,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0.503347818173209,0.725362142011344,0.336093799142464,0,0,0,12.1389876515759,6.87688273053643,14.5781222806421,0,0,0,0,0,0,0,5.08079100311541,6.21027316325777,5.67877395648731,4.85606673486466,3.53389665522582,6.24703075996266,4.2172007248024,7.35375029288017,5.50579404996943,2.68143409978894,4.91540906419979,13.8480602116704,12.5338071735301,8.33461392890816,2.51264699101243,2.8138130501584,3.51435969886663,5.59794312399969,5.55249555116501,8.94717339961443,0,0.226714680320357,0,0,0,0,0,0,0,0.170430322578058,0,0,0.422530259330042,0,0,0,0,0.253359865475099,0,0.11418387971906,0.517875767294343,0,1.21439728736295,0,0.691846491768175,0.60289056221049,0.705532242814229,0.125666591329675,0,0,0,0.485300549842228,0,0.484875253135222,0,2.34224637609238,3.56059401582874,0,0,0,0.381210681219194,4.34392854273986,2.74500361691176,6.78533501409468,5.04090528557602,5.11430914660661,3.1168206683934,4.2182728397617,0.101839363850316,0.497627882440372,0,0.841767423545896,0.260240885925407,0.459804208866946,1.80062129805349,1.65775299619287,2.24520447199382,2.43416068541215,2.24884138943349,0.517406741478031,0,0.945530400839096,0.527853372491847,0.219195732427575,0.556094498451196,0.348252166522167,0.411564272815887,0.398068533636986,0,0.257347907114715,0,0,0.703578179943289,0,0.473489471170421,0.590292695242212,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.32833492815819,0.0810688095458557,0.146199987425332,0,0,5.04695876553905,6.48299057989492,0.330418782983798,0.264450566663544,1.2797295032114,0.232236671860439,0,0.403367049246685,0,0,0,0.164698954724011,1.00534083520108,0.198956472041151,0.19496408711912,0,0,0,0,0.571242563048644,2.25415471346161,0.407302655690628,0,0.0701358198903186,0.252946148497029,0.147610147979602,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0.369506380333209,0.37898282354097,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0,0.390267295715598,0.157635144106191,0,0.318909537314974,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0.275936746304732,3.05046120976805,4.33683240391152,0.327869890753351,0,0.94652465824877,0.390438744296638,0.646270193198397,0.477937595905104,0.891194696329576,1.13230612315533,0.404810701674894,0.292255857911312,0.395287777946524,4.17717711348349,0.425820255624806,0.35613120733451,0.325773918707152,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,1.8006109403131,0.905510786479282,0.857348140126369,0.709360934569094,1.07021290561242,1.48094118541909,0.608929898229199,0,0,0,0.16488625294148,0.968786560175433,0.422190474497091,0.119372344003136,0.164140899745061,0,2.59595422814714,0,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0.139951452323658,0.276399947608848,0,0.316335993581135,0.406638934253697,0.216010681643603,0.418176592028937,0,0.269728692769641,0.165306911450672,0.26175594198403,0,0.621339313086926,2.25477175473676,0.299033092087958,0.165458490457098,0.194451188344048,0.258319646955462,0.844780627453891,0.117357238645754,0.651021924219751,1.04859344425711,2.65742532908607,0.864090018773596,0.316011120628178,0.202725215290164,0.102710957164827,0.129920822977795,0.179026695667481,0.596044064343795,0,0,0.100966449948148,0.381034033274999,0.201652370273681,0.0974578807397524,0.481059208201647,0.701261413089414,0.453460767230423,0.221985953374065,0.179427713218951,0.167884616364078,0.386379188064381,0,0.36630324853453,0,0,5.64751842617067,5.52390283808612,5.15605962095457,8.59265911718438,6.16574267793578,9.82012066606611,3.37511250115903,3.60256962579376,1.35942722695261,6.21312374102184,2.07574695168353,2.39414924040619,1.70733605754134,2.18796045361465,1.88651846365184,1.47074806760011,1.55572709461131,1.03017528619447,0.320919209591815,1.26348605881899,1.2673964994512,0.943131706930381,1.21733959710847,1.79270426733634,1.32101578597911,2.38146845641537,2.20180219295225,1.54327376370964,0.412085900803307,1.47198920134397,0.685738504770831,0.354951612318675,0.715308569841963,1.16277133305863,1.41164070622996,0.676916863133412,0.73171189149109,0.789209134313529,1.35804113845862,1.68342681497322,1.66089025373844,1.0835493061312,2.45538625901814,1.08455788830176,1.35034627686799,2.99772693525535,1.16965804222704,1.50409737833809,0.382576664137687,0.220591419119515,0.695603506861264 | |||
|short_description=p3@Parp6 | |||
}} |
Revision as of 18:24, 14 September 2013
Short description: | p3@Parp6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Parp6_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000026267, ENSMUST00000050483, NM_001205239, NM_029922, NR_038074, NR_038075, uc009pxz.1, uc009pya.1, uc009pyb.1, uc009pyc.1_5end |
EntrezGene: | Parp6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.99e-25 | 23 |
neuroblast (sensu Vertebrata) | 5.99e-25 | 23 |
neuron | 6.04e-16 | 33 |
neuronal stem cell | 6.04e-16 | 33 |
neuroblast | 6.04e-16 | 33 |
electrically signaling cell | 6.04e-16 | 33 |
electrically responsive cell | 3.32e-12 | 39 |
electrically active cell | 3.32e-12 | 39 |
neural cell | 2.52e-10 | 43 |
ectodermal cell | 6.50e-10 | 44 |
neurectodermal cell | 6.50e-10 | 44 |
neuron of cerebral cortex | 1.15e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.