FFCP PHASE1:Mm9::chr1:89406858..89406869,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=53972|HGNC=|MCL_coexpression_id=2|UniProt=Q8CHT1|association_with_transcript=67bp_to_ENSMUST00000027477,NM_019867,uc007bwx.2_5end|description=CAGE_peak_4_at_Ngef_5end|id=chr1:89406858..89406869,-|ontology_enrichment_celltype=CL:0000117!2.02e-12!23;CL:0000337!2.02e-12!23;CL:0002319!1.53e-08!43;CL:0000221!3.80e-08!44;CL:0000133!3.80e-08!44;CL:0000540!2.50e-07!33;CL:0000047!2.50e-07!33;CL:0000031!2.50e-07!33;CL:0000404!2.50e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.17e-09,23;CL:0000337,1.17e-09,23;CL:0002612,1.88e-07,3;CL:0002614,2.84e-07,3;CL:0002610,6.01e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.03e-24!75;UBERON:0001016!1.03e-24!75;UBERON:0001017!5.50e-24!73;UBERON:0005743!5.50e-24!73;UBERON:0001049!1.45e-23!52;UBERON:0005068!1.45e-23!52;UBERON:0006241!1.45e-23!52;UBERON:0007135!1.45e-23!52;UBERON:0000033!4.63e-23!63;UBERON:0002020!1.11e-22!34;UBERON:0003056!8.62e-22!49;UBERON:0000955!1.48e-21!50;UBERON:0006238!1.48e-21!50;UBERON:0002346!2.33e-21!71;UBERON:0003075!2.33e-21!71;UBERON:0007284!2.33e-21!71;UBERON:0002616!8.28e-21!49;UBERON:0004121!9.77e-21!102;UBERON:0000924!9.77e-21!102;UBERON:0006601!9.77e-21!102;UBERON:0003080!8.01e-19!40;UBERON:0002791!2.91e-18!29;UBERON:0003528!2.91e-18!29;UBERON:0001893!2.91e-18!29;UBERON:0002780!5.42e-18!39;UBERON:0001890!5.42e-18!39;UBERON:0006240!5.42e-18!39;UBERON:0007811!1.22e-13!86;UBERON:0002619!1.24e-12!17;UBERON:0000956!3.53e-12!21;UBERON:0001869!3.53e-12!21;UBERON:0000203!3.53e-12!21;UBERON:0000153!9.72e-12!94;UBERON:0002021!4.72e-11!10;UBERON:0000411!4.72e-11!10;UBERON:0001950!4.72e-11!10;UBERON:0002420!2.06e-07!8;UBERON:0007245!2.06e-07!8;UBERON:0010009!2.06e-07!8;UBERON:0010011!2.06e-07!8;UBERON:0000454!2.06e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.18e-36,54;UBERON:0001049,8.57e-33,52;UBERON:0005068,8.57e-33,52;UBERON:0006241,8.57e-33,52;UBERON:0007135,8.57e-33,52;UBERON:0002346,2.61e-31,64;UBERON:0003075,2.61e-31,64;UBERON:0007284,2.61e-31,64;UBERON:0001017,1.28e-30,73;UBERON:0002020,2.41e-30,34;UBERON:0001016,1.32e-29,75;UBERON:0010371,1.47e-26,73;UBERON:0004121,1.62e-26,95;UBERON:0000924,1.62e-26,95;UBERON:0006601,1.62e-26,95;UBERON:0002021,1.98e-24,10;UBERON:0000411,1.98e-24,10;UBERON:0001950,1.98e-24,10;UBERON:0000955,4.07e-24,47;UBERON:0006238,4.07e-24,47;UBERON:0003056,7.96e-23,49;UBERON:0002616,1.10e-22,46;UBERON:0003080,2.19e-22,40;UBERON:0003528,3.15e-21,29;UBERON:0002791,3.15e-21,29;UBERON:0001893,3.15e-21,29;UBERON:0002780,8.84e-21,39;UBERON:0001890,8.84e-21,39;UBERON:0006240,8.84e-21,39;UBERON:0010314,1.41e-19,92;UBERON:0002619,4.17e-16,17;UBERON:0000956,3.71e-15,21;UBERON:0001869,3.71e-15,21;UBERON:0000203,3.71e-15,21;UBERON:0002240,1.78e-13,6;UBERON:0005174,1.78e-13,6;UBERON:0001137,1.78e-13,6;UBERON:0000025,2.92e-12,114;UBERON:0001948,1.33e-11,5;UBERON:0002315,1.33e-11,5;UBERON:0004111,5.31e-11,122;UBERON:0003076,8.58e-11,12;UBERON:0003057,8.58e-11,12;UBERON:0002950,3.07e-09,4;UBERON:0001891,3.07e-09,4;UBERON:0009616,3.07e-09,4;UBERON:0010286,3.07e-09,4;UBERON:0000483,1.23e-07,174;UBERON:0011216,1.66e-07,194;UBERON:0000119,1.82e-07,176;UBERON:0002257,1.88e-07,3;UBERON:0002038,2.84e-07,3;UBERON:0009663,2.84e-07,3;UBERON:0009661,2.84e-07,3;UBERON:0000125,2.84e-07,3;UBERON:0002308,2.84e-07,3;UBERON:0002420,3.15e-07,8;UBERON:0007245,3.15e-07,8;UBERON:0010009,3.15e-07,8;UBERON:0010011,3.15e-07,8;UBERON:0000454,3.15e-07,8;UBERON:0004684,6.01e-07,3;UBERON:0002275,6.01e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,1.53687322128622,0,0.675029691658453,0,8.2838785477103,6.84692476950002,0.979926393719632,0.670918297127655,0,1.10115880999389,2.93680877595932,3.68655679814984,0.791317726381163,0.457438218012048,0.52091337055676,1.95428099300967,4.50210088025344,3.20876320331301,5.30331453852602,5.83723891276322,2.05039390407831,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0.292780797011547,0,0,0,0,0,4.34392854273986,29.2800385803921,9.04711335212624,18.251553620189,12.0186264945255,3.74018480207208,7.62533936418461,0,0.124406970610093,0,0.420883711772948,0.520481771850815,0,1.44049703844279,0.30140963567143,1.02054748726992,1.2811372028485,0.749613796477831,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,0.411618449517138,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,1.9266070798535,1.17211686592203,0,0,0.3155082194162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| ||
|EntrezGene=53972 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=Q8CHT1 | |||
|association_with_transcript=67bp_to_ENSMUST00000027477,NM_019867,uc007bwx.2_5end | |||
|description=CAGE_peak_4_at_Ngef_5end | |||
|id=chr1:89406858..89406869,- | |||
|ontology_enrichment_celltype=CL:0000117!2.02e-12!23;CL:0000337!2.02e-12!23;CL:0002319!1.53e-08!43;CL:0000221!3.80e-08!44;CL:0000133!3.80e-08!44;CL:0000540!2.50e-07!33;CL:0000047!2.50e-07!33;CL:0000031!2.50e-07!33;CL:0000404!2.50e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.17e-09,23;CL:0000337,1.17e-09,23;CL:0002612,1.88e-07,3;CL:0002614,2.84e-07,3;CL:0002610,6.01e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.03e-24!75;UBERON:0001016!1.03e-24!75;UBERON:0001017!5.50e-24!73;UBERON:0005743!5.50e-24!73;UBERON:0001049!1.45e-23!52;UBERON:0005068!1.45e-23!52;UBERON:0006241!1.45e-23!52;UBERON:0007135!1.45e-23!52;UBERON:0000033!4.63e-23!63;UBERON:0002020!1.11e-22!34;UBERON:0003056!8.62e-22!49;UBERON:0000955!1.48e-21!50;UBERON:0006238!1.48e-21!50;UBERON:0002346!2.33e-21!71;UBERON:0003075!2.33e-21!71;UBERON:0007284!2.33e-21!71;UBERON:0002616!8.28e-21!49;UBERON:0004121!9.77e-21!102;UBERON:0000924!9.77e-21!102;UBERON:0006601!9.77e-21!102;UBERON:0003080!8.01e-19!40;UBERON:0002791!2.91e-18!29;UBERON:0003528!2.91e-18!29;UBERON:0001893!2.91e-18!29;UBERON:0002780!5.42e-18!39;UBERON:0001890!5.42e-18!39;UBERON:0006240!5.42e-18!39;UBERON:0007811!1.22e-13!86;UBERON:0002619!1.24e-12!17;UBERON:0000956!3.53e-12!21;UBERON:0001869!3.53e-12!21;UBERON:0000203!3.53e-12!21;UBERON:0000153!9.72e-12!94;UBERON:0002021!4.72e-11!10;UBERON:0000411!4.72e-11!10;UBERON:0001950!4.72e-11!10;UBERON:0002420!2.06e-07!8;UBERON:0007245!2.06e-07!8;UBERON:0010009!2.06e-07!8;UBERON:0010011!2.06e-07!8;UBERON:0000454!2.06e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.18e-36,54;UBERON:0001049,8.57e-33,52;UBERON:0005068,8.57e-33,52;UBERON:0006241,8.57e-33,52;UBERON:0007135,8.57e-33,52;UBERON:0002346,2.61e-31,64;UBERON:0003075,2.61e-31,64;UBERON:0007284,2.61e-31,64;UBERON:0001017,1.28e-30,73;UBERON:0002020,2.41e-30,34;UBERON:0001016,1.32e-29,75;UBERON:0010371,1.47e-26,73;UBERON:0004121,1.62e-26,95;UBERON:0000924,1.62e-26,95;UBERON:0006601,1.62e-26,95;UBERON:0002021,1.98e-24,10;UBERON:0000411,1.98e-24,10;UBERON:0001950,1.98e-24,10;UBERON:0000955,4.07e-24,47;UBERON:0006238,4.07e-24,47;UBERON:0003056,7.96e-23,49;UBERON:0002616,1.10e-22,46;UBERON:0003080,2.19e-22,40;UBERON:0003528,3.15e-21,29;UBERON:0002791,3.15e-21,29;UBERON:0001893,3.15e-21,29;UBERON:0002780,8.84e-21,39;UBERON:0001890,8.84e-21,39;UBERON:0006240,8.84e-21,39;UBERON:0010314,1.41e-19,92;UBERON:0002619,4.17e-16,17;UBERON:0000956,3.71e-15,21;UBERON:0001869,3.71e-15,21;UBERON:0000203,3.71e-15,21;UBERON:0002240,1.78e-13,6;UBERON:0005174,1.78e-13,6;UBERON:0001137,1.78e-13,6;UBERON:0000025,2.92e-12,114;UBERON:0001948,1.33e-11,5;UBERON:0002315,1.33e-11,5;UBERON:0004111,5.31e-11,122;UBERON:0003076,8.58e-11,12;UBERON:0003057,8.58e-11,12;UBERON:0002950,3.07e-09,4;UBERON:0001891,3.07e-09,4;UBERON:0009616,3.07e-09,4;UBERON:0010286,3.07e-09,4;UBERON:0000483,1.23e-07,174;UBERON:0011216,1.66e-07,194;UBERON:0000119,1.82e-07,176;UBERON:0002257,1.88e-07,3;UBERON:0002038,2.84e-07,3;UBERON:0009663,2.84e-07,3;UBERON:0009661,2.84e-07,3;UBERON:0000125,2.84e-07,3;UBERON:0002308,2.84e-07,3;UBERON:0002420,3.15e-07,8;UBERON:0007245,3.15e-07,8;UBERON:0010009,3.15e-07,8;UBERON:0010011,3.15e-07,8;UBERON:0000454,3.15e-07,8;UBERON:0004684,6.01e-07,3;UBERON:0002275,6.01e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,1.53687322128622,0,0.675029691658453,0,8.2838785477103,6.84692476950002,0.979926393719632,0.670918297127655,0,1.10115880999389,2.93680877595932,3.68655679814984,0.791317726381163,0.457438218012048,0.52091337055676,1.95428099300967,4.50210088025344,3.20876320331301,5.30331453852602,5.83723891276322,2.05039390407831,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0.292780797011547,0,0,0,0,0,4.34392854273986,29.2800385803921,9.04711335212624,18.251553620189,12.0186264945255,3.74018480207208,7.62533936418461,0,0.124406970610093,0,0.420883711772948,0.520481771850815,0,1.44049703844279,0.30140963567143,1.02054748726992,1.2811372028485,0.749613796477831,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,0.411618449517138,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,1.9266070798535,1.17211686592203,0,0,0.315508219416257,0,0,0,0,0,0,0,0,1.28528526568723,0.141940085208269,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0.164549020602121,1.522324745573,0,0,0,0,0,0.0603129249281559,0,0,0,2.96680483216816,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0.149516546043979,0,0.583353565032143,0.516639293910924,0.168956125490778,0,0,0.104859344425711,0,0,0,0.405450430580328,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,11.8597886949584,11.5081309126794,14.3223878359849,14.4356673168698,17.8121455140367,24.1726047164704,17.550585006027,13.9599572999508,17.672553950384,19.6748918465692,0.207574695168353,0,0,0,0.419226325255965,0.735374033800057,0,0.412070114477788,0.320919209591815,0,0,0.377252682772152,0.280924522409647,0.192075457214608,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0,0.282328141245992,0.25384382367503,0,0.789209134313529,0.543216455383447,0,0.237270036248348,0,0,0.154936841185966,0.192906610981141,0.499621155875892,0,0,0.57386499620653,0,0.695603506861264 | |||
|short_description=p4@Ngef | |||
}} |
Revision as of 21:10, 13 September 2013
Short description: | p4@Ngef |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ngef_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 67bp_to_ENSMUST00000027477, NM_019867, uc007bwx.2_5end |
EntrezGene: | Ngef |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.17e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.17e-09 | 23 |
neuron of the ventral spinal cord | 1.88e-07 | 3 |
neuron of the substantia nigra | 2.84e-07 | 3 |
raphe nuclei neuron | 6.01e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
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