FFCP PHASE1:Hg19::chr1:150584006..150584024,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=450bp_to_AK129725_5end|coexpression_cluster_id=C1835|description=CAGE_peak_1_at_AK129725_5end|id=chr1:150584006..150584024,-|ontology_enrichment_celltype=CL:0000738!2.54e-34!140;CL:0002057!3.91e-31!42;CL:0000037!1.79e-29!172;CL:0000566!1.79e-29!172;CL:0000860!1.48e-27!45;CL:0002032!1.80e-26!165;CL:0000837!1.80e-26!165;CL:0000988!2.61e-25!182;CL:0002087!6.53e-25!119;CL:0000766!7.25e-25!76;CL:0002031!1.06e-24!124;CL:0000557!4.41e-21!71;CL:0000763!2.21e-20!112;CL:0000049!2.21e-20!112;CL:0002009!8.79e-20!65;CL:0002194!1.73e-18!63;CL:0000576!1.73e-18!63;CL:0000040!1.73e-18!63;CL:0000559!1.73e-18!63;CL:0000839!3.99e-18!70;CL:0000134!1.70e-12!358;CL:0002320!1.88e-12!365;CL:0000048!2.85e-09!430;CL:0000034!4.44e-09!444;CL:0000723!1.12e-08!436;CL:0000219!1.59e-08!390;CL:0000094!8.59e-08!8;CL:0002393!9.53e-08!9;CL:0002397!9.53e-08!9|ontology_enrichment_celltype_v019=CL:0000860;5.67e-40;33!CL:0002057;5.67e-40;33!CL:0000576;8.97e-31;48!CL:0000473;1.82e-27;39!CL:0000234;1.82e-27;39!CL:0000766;1.41e-24;69!CL:0002087;3.69e-14;104!CL:0000094;1.65e-13;8!CL:0000763;1.03e-11;100!CL:0000738;1.44e-11;136!CL:0002393;2.89e-10;6!CL:0002397;2.89e-10;6!CL:0000081;2.82e-09;11!CL:0000988;9.80e-08;177!CL:0000219;1.73e-07;193!CL:0000791;7.78e-07;18!CL:0000789;7.78e-07;18!CL:0002419;7.78e-07;18!CL:0000624;9.16e-07;6|ontology_enrichment_celltype_v019_2=CL:0000738,1.21e-57,136;CL:0000860,2.76e-56,42;CL:0002057,2.76e-56,42;CL:0000766,1.35e-52,72;CL:0000473,2.12e-47,48;CL:0000234,2.12e-47,48;CL:0000037,3.58e-47,168;CL:0000557,7.12e-45,67;CL:0000988,1.88e-43,177;CL:0002009,1.88e-41,61;CL:0002032,2.28e-41,161;CL:0000837,2.28e-41,161;CL:0002031,1.34e-40,120;CL:0002087,8.66e-40,115;CL:0000839,1.42e-39,66;CL:0000763,5.70e-39,108;CL:0000049,5.70e-39,108;CL:0002194,8.01e-39,59;CL:0000576,8.01e-39,59;CL:0000040,8.01e-39,59;CL:0000559,8.01e-39,59;CL:0000134,3.45e-25,354;CL:0002320,4.02e-24,361;CL:0000219,2.19e-20,386;CL:0000034,7.02e-19,441;CL:0000048,2.32e-18,427;CL:0000723,1.08e-17,433;CL:0000094,1.65e-13,8;CL:0002393,2.01e-13,9;CL:0002397,2.01e-13,9;CL:0000081,2.82e-09,11;CL:0000791,6.65e-07,18;CL:0000789,6.65e-07,18;CL:0002420,6.65e-07,18;CL:0002419,6.65e-07,18;CL:0000790,6.65e-07,18;CL:0000624,8.69e-07,6|ontology_enrichment_development_v019=CL:0002057;4.44e-40;42!CL:0000049;7.05e-11;108!CL:0000790;7.78e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.05e-24!102;UBERON:0003061!3.05e-24!102;UBERON:0002193!1.97e-21!112;UBERON:0002371!2.84e-19!80;UBERON:0001474!6.84e-18!86;UBERON:0002405!2.93e-16!115;UBERON:0004765!4.41e-14!101;UBERON:0001434!4.41e-14!101;UBERON:0002384!6.50e-12!375;UBERON:0003081!6.04e-08!216|ontology_enrichment_uberon_v019=UBERON:0000178;1.39e-10;15!UBERON:0000179;1.39e-10;15!UBERON:0000463;1.39e-10;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.20e-46,98;UBERON:0003061,1.20e-46,98;UBERON:0002193,1.79e-40,108;UBERON:0002371,1.38e-39,76;UBERON:0001474,4.93e-37,82;UBERON:0004765,2.82e-32,90;UBERON:0002405,6.43e-31,93;UBERON:0001434,2.02e-27,100;UBERON:0002384,1.14e-22,371;UBERON:0003081,2.82e-16,203;UBERON:0002204,4.70e-13,167;UBERON:0000178,1.27e-10,15;UBERON:0000179,1.27e-10,15;UBERON:0000463,1.27e-10,15;UBERON:0000926,1.87e-08,315;UBERON:0004120,1.87e-08,315;UBERON:0006603,1.87e-08,315|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0.618831764800233,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,23.9952208877831,16.5046641181801,14.0882672217629,0,0,0,0.774672005803016,0.426507697462265,8.22081230137572,33.7937199204445,26.0707781711184,47.5253806867715,0,0,0,2.32637182047304,1.51150377475524,4.12392904019288,5.57829688573643,2.05583944010913,11.7688420940139,28.4815468398929,11.0149103807513,22.7022940693042,45.5064298572336,27.7558413941045,24.3767675869815,4.70605848856512,0.545812300115692,4.71919317334678,55.4011845191334,13.1580901101198,40.2782389253396,4.61791820261403,6.38283704389222,8.95071976118658,11.8985787837719,3.40431134814684,8.09668923694247,26.381109851958,13.037072960505,28.6689275010754,5.44859552370032,5.89244217580104,12.3420331101945,5.0701268714866,4.25208599930087,8.80566311135179,12.9177925818469,15.1678661769921,7.87555374815693,5.70025487482497,1.59133341759272,2.19196984517561,0,0.546138611262131,0,0.853460445133014,0,0.574752439954483,0,0,2.27685187643779,4.11066032559657,3.82273228125229,6.60856642895129,3.36305137788922,2.63384084775077,14.5565229884236,13.3623659334716,6.16804496998528,0,0.977766799900771,0.946895611469467,0,0.891283655081389,3.82987679717288,3.1014745241707,0.812411591295047,0.128091319725675,0.780356085359269,0.822189523018381,0.276350017785848,0.289803085735052,2.07601188426885,2.40786745280742,1.04535523804977,0.339928028092699,6.51474839123266,7.55980380061786,5.8194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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=450bp_to_AK129725_5end | |||
|coexpression_cluster_id=C1835 | |||
|description=CAGE_peak_1_at_AK129725_5end | |||
|id=chr1:150584006..150584024,- | |||
|ontology_enrichment_celltype=CL:0000738!2.54e-34!140;CL:0002057!3.91e-31!42;CL:0000037!1.79e-29!172;CL:0000566!1.79e-29!172;CL:0000860!1.48e-27!45;CL:0002032!1.80e-26!165;CL:0000837!1.80e-26!165;CL:0000988!2.61e-25!182;CL:0002087!6.53e-25!119;CL:0000766!7.25e-25!76;CL:0002031!1.06e-24!124;CL:0000557!4.41e-21!71;CL:0000763!2.21e-20!112;CL:0000049!2.21e-20!112;CL:0002009!8.79e-20!65;CL:0002194!1.73e-18!63;CL:0000576!1.73e-18!63;CL:0000040!1.73e-18!63;CL:0000559!1.73e-18!63;CL:0000839!3.99e-18!70;CL:0000134!1.70e-12!358;CL:0002320!1.88e-12!365;CL:0000048!2.85e-09!430;CL:0000034!4.44e-09!444;CL:0000723!1.12e-08!436;CL:0000219!1.59e-08!390;CL:0000094!8.59e-08!8;CL:0002393!9.53e-08!9;CL:0002397!9.53e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.67e-40;33!CL:0002057;5.67e-40;33!CL:0000576;8.97e-31;48!CL:0000473;1.82e-27;39!CL:0000234;1.82e-27;39!CL:0000766;1.41e-24;69!CL:0002087;3.69e-14;104!CL:0000094;1.65e-13;8!CL:0000763;1.03e-11;100!CL:0000738;1.44e-11;136!CL:0002393;2.89e-10;6!CL:0002397;2.89e-10;6!CL:0000081;2.82e-09;11!CL:0000988;9.80e-08;177!CL:0000219;1.73e-07;193!CL:0000791;7.78e-07;18!CL:0000789;7.78e-07;18!CL:0002419;7.78e-07;18!CL:0000624;9.16e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.21e-57,136;CL:0000860,2.76e-56,42;CL:0002057,2.76e-56,42;CL:0000766,1.35e-52,72;CL:0000473,2.12e-47,48;CL:0000234,2.12e-47,48;CL:0000037,3.58e-47,168;CL:0000557,7.12e-45,67;CL:0000988,1.88e-43,177;CL:0002009,1.88e-41,61;CL:0002032,2.28e-41,161;CL:0000837,2.28e-41,161;CL:0002031,1.34e-40,120;CL:0002087,8.66e-40,115;CL:0000839,1.42e-39,66;CL:0000763,5.70e-39,108;CL:0000049,5.70e-39,108;CL:0002194,8.01e-39,59;CL:0000576,8.01e-39,59;CL:0000040,8.01e-39,59;CL:0000559,8.01e-39,59;CL:0000134,3.45e-25,354;CL:0002320,4.02e-24,361;CL:0000219,2.19e-20,386;CL:0000034,7.02e-19,441;CL:0000048,2.32e-18,427;CL:0000723,1.08e-17,433;CL:0000094,1.65e-13,8;CL:0002393,2.01e-13,9;CL:0002397,2.01e-13,9;CL:0000081,2.82e-09,11;CL:0000791,6.65e-07,18;CL:0000789,6.65e-07,18;CL:0002420,6.65e-07,18;CL:0002419,6.65e-07,18;CL:0000790,6.65e-07,18;CL:0000624,8.69e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;4.44e-40;42!CL:0000049;7.05e-11;108!CL:0000790;7.78e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.05e-24!102;UBERON:0003061!3.05e-24!102;UBERON:0002193!1.97e-21!112;UBERON:0002371!2.84e-19!80;UBERON:0001474!6.84e-18!86;UBERON:0002405!2.93e-16!115;UBERON:0004765!4.41e-14!101;UBERON:0001434!4.41e-14!101;UBERON:0002384!6.50e-12!375;UBERON:0003081!6.04e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.39e-10;15!UBERON:0000179;1.39e-10;15!UBERON:0000463;1.39e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.20e-46,98;UBERON:0003061,1.20e-46,98;UBERON:0002193,1.79e-40,108;UBERON:0002371,1.38e-39,76;UBERON:0001474,4.93e-37,82;UBERON:0004765,2.82e-32,90;UBERON:0002405,6.43e-31,93;UBERON:0001434,2.02e-27,100;UBERON:0002384,1.14e-22,371;UBERON:0003081,2.82e-16,203;UBERON:0002204,4.70e-13,167;UBERON:0000178,1.27e-10,15;UBERON:0000179,1.27e-10,15;UBERON:0000463,1.27e-10,15;UBERON:0000926,1.87e-08,315;UBERON:0004120,1.87e-08,315;UBERON:0006603,1.87e-08,315 | |||
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| |||
|short_description=p1@AK129725 | |||
}} |
Revision as of 00:15, 12 September 2013
Short description: | p1@AK129725 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AK129725_5end |
Coexpression cluster: | C1835_CD14_Mast_Natural_Eosinophils_Peripheral_immature_Basophils |
Association with transcript: | 450bp_to_AK129725_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.20e-46 | 98 |
blood island | 1.20e-46 | 98 |
hemolymphoid system | 1.79e-40 | 108 |
bone marrow | 1.38e-39 | 76 |
bone element | 4.93e-37 | 82 |
skeletal element | 2.82e-32 | 90 |
immune system | 6.43e-31 | 93 |
skeletal system | 2.02e-27 | 100 |
connective tissue | 1.14e-22 | 371 |
lateral plate mesoderm | 2.82e-16 | 203 |
musculoskeletal system | 4.70e-13 | 167 |
blood | 1.27e-10 | 15 |
haemolymphatic fluid | 1.27e-10 | 15 |
organism substance | 1.27e-10 | 15 |
mesoderm | 1.87e-08 | 315 |
mesoderm-derived structure | 1.87e-08 | 315 |
presumptive mesoderm | 1.87e-08 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.