FFCP PHASE1:Hg19::chr11:105481612..105481624,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2893|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4574|TSSclassifier=S|UniProt=E9PQY1|association_with_transcript=-9bp_to_ENST00000531011_5end|coexpression_cluster_id=C3|description=CAGE_peak_2_at_GRIA4_5end|id=chr11:105481612..105481624,+|ontology_enrichment_celltype=CL:0000540!1.89e-07!6;CL:0000031!1.89e-07!6;CL:0000404!1.89e-07!6;CL:0000047!2.11e-07!8|ontology_enrichment_celltype_v019=CL:0000540;2.96e-08;6!CL:0000404;2.96e-08;6!CL:0000064;6.77e-07;3!CL:0000067;6.77e-07;3!CL:0005012;6.77e-07;3!CL:0002304;6.77e-07;3|ontology_enrichment_celltype_v019_2=CL:0000047,8.57e-09,8;CL:0000540,3.22e-08,6;CL:0000031,3.22e-08,6;CL:0000404,3.22e-08,6;CL:0000064,6.63e-07,3;CL:0000067,6.63e-07,3;CL:0005012,6.63e-07,3;CL:0002304,6.63e-07,3|ontology_enrichment_development_v019=UBERON:0006601;7.85e-22;82!UBERON:0006215;1.01e-08;3!CL:0000031;2.96e-08;6!UBERON:0006241;9.93e-08;3!UBERON:0003057;9.93e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.17e-62!94;UBERON:0001016!2.17e-62!94;UBERON:0001049!1.20e-61!57;UBERON:0005068!1.20e-61!57;UBERON:0006241!1.20e-61!57;UBERON:0007135!1.20e-61!57;UBERON:0005743!7.69e-61!86;UBERON:0001017!7.96e-61!82;UBERON:0003075!2.55e-57!86;UBERON:0007284!2.55e-57!86;UBERON:0002346!3.82e-57!90;UBERON:0002616!3.04e-51!59;UBERON:0002780!5.78e-49!41;UBERON:0001890!5.78e-49!41;UBERON:0006240!5.78e-49!41;UBERON:0000955!2.63e-48!69;UBERON:0006238!2.63e-48!69;UBERON:0003080!1.89e-47!42;UBERON:0003056!8.29e-45!61;UBERON:0000924!1.02e-41!173;UBERON:0006601!1.02e-41!173;UBERON:0002020!2.19e-41!34;UBERON:0003528!2.19e-41!34;UBERON:0001893!2.53e-41!34;UBERON:0004121!4.17e-41!169;UBERON:0002791!6.16e-40!33;UBERON:0001869!7.55e-39!32;UBERON:0007023!7.45e-37!115;UBERON:0000033!3.14e-33!123;UBERON:0000153!9.07e-32!129;UBERON:0007811!9.07e-32!129;UBERON:0002619!7.42e-31!22;UBERON:0000956!1.79e-30!25;UBERON:0000203!1.79e-30!25;UBERON:0001950!1.48e-28!20;UBERON:0003076!9.11e-15!15;UBERON:0003057!9.11e-15!15;UBERON:0000064!2.30e-13!219;UBERON:0004732!2.53e-12!13;UBERON:0002308!3.29e-12!9;UBERON:0000125!3.29e-12!9;UBERON:0002420!3.33e-12!9;UBERON:0007245!3.33e-12!9;UBERON:0010009!3.33e-12!9;UBERON:0010011!3.33e-12!9;UBERON:0000454!3.33e-12!9;UBERON:0001871!1.40e-11!7;UBERON:0004733!3.29e-11!12;UBERON:0002028!3.29e-11!12;UBERON:0007277!3.29e-11!12;UBERON:0000922!9.69e-11!612;UBERON:0000483!7.51e-10!309;UBERON:0000025!1.29e-09!194;UBERON:0009663!1.40e-09!7;UBERON:0000200!1.44e-09!6;UBERON:0000119!1.53e-09!312;UBERON:0002298!5.25e-09!8;UBERON:0000468!5.94e-09!659;UBERON:0001894!6.87e-09!7;UBERON:0006222!6.87e-09!7;UBERON:0000475!7.76e-09!365;UBERON:0002050!1.63e-08!605;UBERON:0005423!1.63e-08!605;UBERON:0000923!3.58e-08!604;UBERON:0005291!3.58e-08!604;UBERON:0006598!3.58e-08!604;UBERON:0002532!3.58e-08!604;UBERON:0001872!3.85e-08!5;UBERON:0002021!6.01e-08!5;UBERON:0000349!7.82e-08!5;UBERON:0000062!9.43e-08!511;UBERON:0002680!1.16e-07!9;UBERON:0001895!1.16e-07!9;UBERON:0010092!1.16e-07!9;UBERON:0000481!2.19e-07!347;UBERON:0000467!3.30e-07!625;UBERON:0000480!3.85e-07!626;UBERON:0004111!7.66e-07!241|ontology_enrichment_uberon_v019=UBERON:0001893;1.75e-52;34!UBERON:0003528;2.44e-52;34!UBERON:0002020;2.44e-52;34!UBERON:0001869;6.32e-52;32!UBERON:0002791;1.17e-51;32!UBERON:0002780;5.34e-51;41!UBERON:0001890;5.34e-51;41!UBERON:0002619;1.15e-50;22!UBERON:0000073;4.45e-48;53!UBERON:0002616;4.45e-48;53!UBERON:0001950;8.20e-47;20!UBERON:0000956;5.72e-44;25!UBERON:0000203;5.72e-44;25!UBERON:0001017;3.06e-33;75!UBERON:0000955;6.44e-32;68!UBERON:0001016;4.22e-30;83!UBERON:0002420;2.30e-19;9!UBERON:0007245;2.30e-19;9!UBERON:0010009;2.30e-19;9!UBERON:0010011;2.30e-19;9!UBERON:0000454;2.30e-19;9!UBERON:0000125;2.35e-19;9!UBERON:0002308;2.35e-19;9!UBERON:0004732;1.62e-17;13!UBERON:0001871;3.15e-16;6!UBERON:0004733;1.08e-15;12!UBERON:0002028;1.08e-15;12!UBERON:0009663;5.73e-15;7!UBERON:0000200;6.16e-15;6!UBERON:0002298;1.24e-14;6!UBERON:0007023;6.25e-14;114!UBERON:0001872;1.45e-12;5!UBERON:0002021;3.46e-12;5!UBERON:0000349;4.83e-12;5!UBERON:0011216;1.24e-11;132!UBERON:0001894;1.37e-10;7!UBERON:0010314;2.72e-10;132!UBERON:0002680;5.75e-10;9!UBERON:0001895;5.75e-10;9!UBERON:0000369;1.77e-09;4!UBERON:0002435;1.77e-09;4!UBERON:0000204;1.77e-09;4!UBERON:0000488;1.76e-08;4!UBERON:0000988;2.05e-08;3!UBERON:0001870;2.39e-08;3!UBERON:0007625;2.86e-08;11!UBERON:0002104;4.86e-08;21!UBERON:0001896;6.72e-08;3!UBERON:0005290;6.72e-08;3!UBERON:0002240;9.93e-08;3!UBERON:0005174;9.93e-08;3!UBERON:0001137;9.93e-08;3!UBERON:0005383;2.66e-07;3!UBERON:0005382;2.66e-07;3!UBERON:0001778;6.77e-07;3!UBERON:0001775;6.77e-07;3!UBERON:0000970;7.85e-07;20!UBERON:0001032;8.57e-07;24!UBERON:0004456;8.57e-07;24!UBERON:0004121;9.23e-07;165|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.29e-93,56;UBERON:0005068,7.29e-93,56;UBERON:0006241,7.29e-93,56;UBERON:0007135,7.29e-93,56;UBERON:0001016,9.54e-90,89;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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2893 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4574 | |||
|TSSclassifier=S | |||
|UniProt=E9PQY1 | |||
|association_with_transcript=-9bp_to_ENST00000531011_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_GRIA4_5end | |||
|id=chr11:105481612..105481624,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.89e-07!6;CL:0000031!1.89e-07!6;CL:0000404!1.89e-07!6;CL:0000047!2.11e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.96e-08;6!CL:0000404;2.96e-08;6!CL:0000064;6.77e-07;3!CL:0000067;6.77e-07;3!CL:0005012;6.77e-07;3!CL:0002304;6.77e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,8.57e-09,8;CL:0000540,3.22e-08,6;CL:0000031,3.22e-08,6;CL:0000404,3.22e-08,6;CL:0000064,6.63e-07,3;CL:0000067,6.63e-07,3;CL:0005012,6.63e-07,3;CL:0002304,6.63e-07,3 | |||
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|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p2@GRIA4 | |||
}} |
Revision as of 15:29, 10 September 2013
Short description: | p2@GRIA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_GRIA4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -9bp_to_ENST00000531011_5end |
EntrezGene: | GRIA4 |
HGNC: | 4574 |
UniProt: | E9PQY1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 8.57e-09 | 8 |
neuron | 3.22e-08 | 6 |
neuroblast | 3.22e-08 | 6 |
electrically signaling cell | 3.22e-08 | 6 |
ciliated cell | 6.63e-07 | 3 |
ciliated epithelial cell | 6.63e-07 | 3 |
multi-ciliated epithelial cell | 6.63e-07 | 3 |
non-pigmented ciliary epithelial cell | 6.63e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.