FFCP PHASE1:Hg19::chr16:67260905..67260952,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26231 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13605 | |||
|TSSclassifier=S | |||
|UniProt=Q8WV35,C9K0K3,B4DNW2 | |||
|association_with_transcript=0bp_to_ENST00000409509,ENST00000433915,ENST00000454102,ENST00000462169,ENST00000485549_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_LRRC29_5end | |||
|id=chr16:67260905..67260952,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.68e-07;18!CL:0000789;6.68e-07;18!CL:0002419;6.68e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.47e-07,18;CL:0000789,1.47e-07,18;CL:0002420,1.47e-07,18;CL:0002419,1.47e-07,18;CL:0000790,1.47e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.37e-09;82!CL:0000790;6.68e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@LRRC29 | |||
}} |
Revision as of 11:09, 11 September 2013
Short description: | p1@LRRC29 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LRRC29_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000409509, ENST00000433915, ENST00000454102, ENST00000462169, ENST00000485549_5end |
EntrezGene: | LRRC29 |
HGNC: | 13605 |
UniProt: | Q8WV35C9K0K3B4DNW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.47e-07 | 18 |
alpha-beta T cell | 1.47e-07 | 18 |
immature T cell | 1.47e-07 | 18 |
mature T cell | 1.47e-07 | 18 |
immature alpha-beta T cell | 1.47e-07 | 18 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.