FFCP PHASE1:Hg19::chr18:35145689..35145718,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56853|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14015|TSSclassifier=W|UniProt=Q9BZC1|association_with_transcript=281bp_to_ENST00000334919,ENST00000361683,ENST00000361795,ENST00000412753,ENST00000420428,NM_001025087,NM_001025088,NM_001025089,NM_020180,uc002lae.2,uc002laf.2,uc002lag.2,uc002lai.2,uc010dnd.1_5end|coexpression_cluster_id=C3|description=CAGE_peak_2_at_CELF4_5end|id=chr18:35145689..35145718,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;3.69e-24;82!UBERON:0006215;7.42e-11;3!UBERON:0006241;2.69e-09;3!UBERON:0003057;2.69e-09;3!UBERON:0010122;1.26e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!9.96e-84!57;UBERON:0005068!9.96e-84!57;UBERON:0006241!9.96e-84!57;UBERON:0007135!9.96e-84!57;UBERON:0001017!1.09e-78!82;UBERON:0005743!5.36e-77!86;UBERON:0000073!6.42e-76!94;UBERON:0001016!6.42e-76!94;UBERON:0000955!4.54e-71!69;UBERON:0006238!4.54e-71!69;UBERON:0002616!2.05e-70!59;UBERON:0002780!2.29e-67!41;UBERON:0001890!2.29e-67!41;UBERON:0006240!2.29e-67!41;UBERON:0003080!1.67e-65!42;UBERON:0003075!8.43e-60!86;UBERON:0007284!8.43e-60!86;UBERON:0002346!1.95e-56!90;UBERON:0002020!9.55e-55!34;UBERON:0003528!9.55e-55!34;UBERON:0001893!1.88e-54!34;UBERON:0002791!1.85e-52!33;UBERON:0001869!2.47e-51!32;UBERON:0003056!1.94e-46!61;UBERON:0007023!2.39e-44!115;UBERON:0002619!1.26e-43!22;UBERON:0001950!2.53e-39!20;UBERON:0004121!7.50e-39!169;UBERON:0000033!2.65e-38!123;UBERON:0000956!9.69e-38!25;UBERON:0000203!9.69e-38!25;UBERON:0000924!1.55e-37!173;UBERON:0006601!1.55e-37!173;UBERON:0000153!8.58e-36!129;UBERON:0007811!8.58e-36!129;UBERON:0000025!2.10e-23!194;UBERON:0002420!1.03e-18!9;UBERON:0007245!1.03e-18!9;UBERON:0010009!1.03e-18!9;UBERON:0010011!1.03e-18!9;UBERON:0000454!1.03e-18!9;UBERON:0003076!1.71e-18!15;UBERON:0003057!1.71e-18!15;UBERON:0002308!2.32e-18!9;UBERON:0000125!2.32e-18!9;UBERON:0004111!1.99e-16!241;UBERON:0009663!1.33e-14!7;UBERON:0001894!5.19e-14!7;UBERON:0006222!5.19e-14!7;UBERON:0001871!8.27e-14!7;UBERON:0000483!8.95e-14!309;UBERON:0000200!9.71e-14!6;UBERON:0004733!1.42e-13!12;UBERON:0002028!1.42e-13!12;UBERON:0007277!1.42e-13!12;UBERON:0000119!1.78e-13!312;UBERON:0000477!9.83e-13!286;UBERON:0004732!2.29e-12!13;UBERON:0002298!3.47e-12!8;UBERON:0000349!4.93e-12!5;UBERON:0001872!1.87e-11!5;UBERON:0002021!2.68e-11!5;UBERON:0000064!3.62e-10!219;UBERON:0000369!9.68e-10!4;UBERON:0002435!9.68e-10!4;UBERON:0000204!9.68e-10!4;UBERON:0010082!9.68e-10!4;UBERON:0000475!3.36e-09!365;UBERON:0003296!8.61e-09!4;UBERON:0010133!8.61e-09!4;UBERON:0002680!9.78e-09!9;UBERON:0001895!9.78e-09!9;UBERON:0010092!9.78e-09!9;UBERON:0002771!6.09e-08!3;UBERON:0000922!9.43e-08!612;UBERON:0005383!9.46e-08!3;UBERON:0005382!9.46e-08!3;UBERON:0000062!1.18e-07!511;UBERON:0000481!1.38e-07!347;UBERON:0000988!2.01e-07!3;UBERON:0000923!3.66e-07!604;UBERON:0005291!3.66e-07!604;UBERON:0006598!3.66e-07!604;UBERON:0002532!3.66e-07!604;UBERON:0002050!4.08e-07!605;UBERON:0005423!4.08e-07!605;UBERON:0001896!6.73e-07!3;UBERON:0005290!6.73e-07!3;UBERON:0010096!6.73e-07!3;UBERON:0006331!7.16e-07!3;UBERON:0002240!8.59e-07!3|ontology_enrichment_uberon_v019=UBERON:0001869;5.07e-68;32!UBERON:0003528;7.92e-66;34!UBERON:0002020;7.92e-66;34!UBERON:0002619;2.16e-64;22!UBERON:0002780;3.91e-64;41!UBERON:0001890;3.91e-64;41!UBERON:0002791;8.62e-64;32!UBERON:0001893;1.23e-61;34!UBERON:0000073;1.16e-60;53!UBERON:0002616;1.16e-60;53!UBERON:0001950;5.79e-58;20!UBERON:0000956;3.12e-56;25!UBERON:0000203;3.12e-56;25!UBERON:0000955;2.62e-45;68!UBERON:0001017;4.72e-42;75!UBERON:0001016;5.50e-36;83!UBERON:0002420;6.72e-22;9!UBERON:0007245;6.72e-22;9!UBERON:0010009;6.72e-22;9!UBERON:0010011;6.72e-22;9!UBERON:0000454;6.72e-22;9!UBERON:0000125;1.72e-21;9!UBERON:0002308;1.72e-21;9!UBERON:0001894;4.50e-20;7!UBERON:0004733;5.58e-20;12!UBERON:0002028;5.58e-20;12!UBERON:0000200;1.25e-19;6!UBERON:0004732;2.65e-18;13!UBERON:0002298;3.96e-18;6!UBERON:0000349;4.57e-17;5!UBERON:0001871;6.72e-17;6!UBERON:0001872;3.16e-16;5!UBERON:0002021;5.14e-16;5!UBERON:0009663;5.83e-16;7!UBERON:0007023;6.03e-16;114!UBERON:0000369;1.08e-13;4!UBERON:0002435;1.08e-13;4!UBERON:0000204;1.08e-13;4!UBERON:0011216;3.63e-13;132!UBERON:0002680;1.04e-12;9!UBERON:0001895;1.04e-12;9!UBERON:0002784;1.62e-12;4!UBERON:0003296;2.48e-12;4!UBERON:0010133;2.48e-12;4!UBERON:0001870;8.31e-11;3!UBERON:0005383;9.46e-11;3!UBERON:0005382;9.46e-11;3!UBERON:0000988;2.59e-10;3!UBERON:0010314;4.64e-10;132!UBERON:0001896;1.55e-09;3!UBERON:0005290;1.55e-09;3!UBERON:0002240;2.69e-09;3!UBERON:0005174;2.69e-09;3!UBERON:0001137;2.69e-09;3!UBERON:0001954;5.04e-08;2!UBERON:0003022;5.04e-08;2!UBERON:0002421;5.04e-08;2!UBERON:0002600;5.04e-08;2!UBERON:0002771;6.35e-08;2!UBERON:0001876;8.55e-08;2!UBERON:0002702;8.83e-08;2!UBERON:0001873;1.26e-07;2!UBERON:0002148;2.55e-07;2!UBERON:0006331;2.55e-07;2!UBERON:0009662;2.55e-07;2!UBERON:0001905;3.78e-07;2!UBERON:0002757;3.78e-07;2!UBERON:0010134;3.78e-07;2!UBERON:0005408;3.78e-07;2!UBERON:0001899;3.78e-07;2!UBERON:0001897;5.00e-07;2!UBERON:0010225;5.00e-07;2!UBERON:0000007;7.67e-07;2!UBERON:0004121;8.09e-07;165!UBERON:0001875;9.19e-07;2!UBERON:0006514;9.19e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.24e-118,56;UBERON:0005068,1.24e-118,56;UBERON:0006241,1.24e-118,56;UBERON:0007135,1.24e-118,56;UBERON:0000073,1.96e-110,53;UBERON:0002616,1.96e-110,53;UBERON:0001017,9.82e-100,81;UBERON:0000955,1.56e-98,68;UBERON:0006238,1.56e-98,68;UBERON:0001016,6.33e-96,89;UBERON:0002780,8.74e-91,41;UBERON:0001890,8.74e-91,41;UBERON:0003080,8.74e-91,41;UBERON:0006240,8.74e-91,41;UBERON:0003075,1.65e-84,82;UBERON:0007284,1.65e-84,82;UBERON:0002346,4.64e-80,86;UBERON:0003528,6.91e-77,34;UBERON:0002020,6.91e-77,34;UBERON:0001869,1.35e-76,32;UBERON:0001893,9.59e-72,34;UBERON:0002791,3.74e-71,32;UBERON:0010371,4.87e-67,104;UBERON:0003056,4.68e-65,61;UBERON:0002619,1.98e-64,22;UBERON:0001950,5.21e-58,20;UBERON:0000956,2.88e-56,25;UBERON:0000203,2.88e-56,25;UBERON:0007023,3.93e-53,114;UBERON:0010314,1.41e-50,132;UBERON:0004121,2.07e-48,171;UBERON:0000924,2.07e-48,171;UBERON:0006601,2.07e-48,171;UBERON:0011216,1.58e-37,223;UBERON:0000025,1.62e-29,192;UBERON:0003076,2.73e-27,15;UBERON:0003057,2.73e-27,15;UBERON:0002420,5.70e-22,9;UBERON:0007245,5.70e-22,9;UBERON:0010009,5.70e-22,9;UBERON:0010011,5.70e-22,9;UBERON:0000454,5.70e-22,9;UBERON:0000125,1.67e-21,9;UBERON:0002308,1.67e-21,9;UBERON:0004111,3.23e-21,240;UBERON:0001894,4.86e-20,7;UBERON:0006222,4.86e-20,7;UBERON:0004733,6.19e-20,12;UBERON:0002028,6.19e-20,12;UBERON:0007277,6.19e-20,12;UBERON:0000200,1.23e-19,6;UBERON:0004732,2.91e-18,13;UBERON:0002298,4.91e-18,6;UBERON:0000349,4.22e-17,5;UBERON:0001871,6.03e-17,6;UBERON:0000483,1.09e-16,306;UBERON:0000119,2.09e-16,309;UBERON:0001872,3.06e-16,5;UBERON:0002021,5.23e-16,5;UBERON:0009663,5.32e-16,7;UBERON:0000369,1.07e-13,4;UBERON:0002435,1.07e-13,4;UBERON:0000204,1.07e-13,4;UBERON:0010082,1.07e-13,4;UBERON:0002680,1.06e-12,9;UBERON:0001895,1.06e-12,9;UBERON:0010092,1.06e-12,9;UBERON:0002784,1.67e-12,4;UBERON:0003296,2.72e-12,4;UBERON:0010133,2.72e-12,4;UBERON:0001870,8.59e-11,3;UBERON:0005383,9.46e-11,3;UBERON:0005382,9.46e-11,3;UBERON:0000988,2.89e-10,3;UBERON:0001896,1.72e-09,3;UBERON:0005290,1.72e-09,3;UBERON:0010096,1.72e-09,3;UBERON:0002240,2.46e-09,3;UBERON:0005174,2.46e-09,3;UBERON:0001137,2.46e-09,3;UBERON:0000923,3.53e-08,560;UBERON:0010316,3.53e-08,560;UBERON:0005291,3.53e-08,560;UBERON:0006598,3.53e-08,560;UBERON:0010317,3.53e-08,560;UBERON:0002532,3.53e-08,560;UBERON:0002050,5.05e-08,564;UBERON:0001954,5.12e-08,2;UBERON:0003022,5.12e-08,2;UBERON:0002421,5.12e-08,2;UBERON:0002600,5.12e-08,2;UBERON:0002771,6.25e-08,2;UBERON:0001876,7.88e-08,2;UBERON:0002702,9.28e-08,2;UBERON:0001873,1.33e-07,2;UBERON:0010122,1.33e-07,2;UBERON:0000922,1.41e-07,592;UBERON:0005423,2.18e-07,581;UBERON:0002148,2.76e-07,2;UBERON:0006331,2.76e-07,2;UBERON:0009662,2.76e-07,2;UBERON:0001905,3.67e-07,2;UBERON:0002757,3.67e-07,2;UBERON:0010134,3.67e-07,2;UBERON:0005408,3.67e-07,2;UBERON:0001899,3.67e-07,2;UBERON:0001897,5.32e-07,2;UBERON:0010225,5.32e-07,2;UBERON:0001875,8.40e-07,2;UBERON:0006514,8.40e-07,2;UBERON:0000007,8.65e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.670065061337395,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.94732882989668,22.225767792861,0,0,0.422250816255987,0,0.276283915531148,0.503865495708552,0,0,0,0,0,0,0,0,0,2.90799823828566,7.32867975478625,1.99613798001194,0,0,0,0,0,0,0,0,1.21537496453305,5.31444831488303,20.0190088118177,16.7839909948792,34.1689913187484,7.97978571174578,7.67848890038904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0.123563938946503,0.104421949505455,0.539209063845416,0,1.874115565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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=56853 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14015 | |||
|TSSclassifier=W | |||
|UniProt=Q9BZC1 | |||
|association_with_transcript=281bp_to_ENST00000334919,ENST00000361683,ENST00000361795,ENST00000412753,ENST00000420428,NM_001025087,NM_001025088,NM_001025089,NM_020180,uc002lae.2,uc002laf.2,uc002lag.2,uc002lai.2,uc010dnd.1_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_CELF4_5end | |||
|id=chr18:35145689..35145718,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.69e-24;82!UBERON:0006215;7.42e-11;3!UBERON:0006241;2.69e-09;3!UBERON:0003057;2.69e-09;3!UBERON:0010122;1.26e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p2@CELF4 | |||
}} |
Revision as of 17:24, 11 September 2013
Short description: | p2@CELF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CELF4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 281bp_to_ENST00000334919, ENST00000361683, ENST00000361795, ENST00000412753, ENST00000420428, NM_001025087, NM_001025088, NM_001025089, NM_020180, uc002lae.2, uc002laf.2, uc002lag.2, uc002lai.2, uc010dnd.1_5end |
EntrezGene: | CELF4 |
HGNC: | 14015 |
UniProt: | Q9BZC1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.