FFCP PHASE1:Hg19::chr8:41348182..41348193,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51125|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24876|TSSclassifier=S|UniProt=Q7Z5G4|association_with_transcript=9bp_to_ENST00000357743,NM_001002296,uc003xnw.2_5end|description=CAGE_peak_5_at_GOLGA7_5end|id=chr8:41348182..41348193,+|ontology_enrichment_celltype=CL:0000094!8.35e-08!8|ontology_enrichment_celltype_v019=CL:0000094;1.13e-18;8!CL:0000081;3.86e-13;11!CL:0000624;9.58e-09;6!CL:0000775;2.11e-08;3!CL:0000791;3.61e-08;18!CL:0000789;3.61e-08;18!CL:0002419;3.61e-08;18!CL:0000623;1.89e-07;3!CL:0000767;4.39e-07;3|ontology_enrichment_celltype_v019_2=CL:0000094,9.58e-19,8;CL:0000081,3.43e-13,11;CL:0000624,7.83e-09,6;CL:0000775,1.74e-08,3;CL:0000791,3.57e-08,18;CL:0000789,3.57e-08,18;CL:0002420,3.57e-08,18;CL:0002419,3.57e-08,18;CL:0000790,3.57e-08,18;CL:0000623,1.77e-07,3;CL:0000825,1.77e-07,3;CL:0000767,4.45e-07,3|ontology_enrichment_development_v019=UBERON:0006601;1.06e-12;82!CL:0000790;3.61e-08;18!UBERON:0006241;2.54e-07;3!UBERON:0003057;2.54e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.15e-20!57;UBERON:0005068!1.15e-20!57;UBERON:0006241!1.15e-20!57;UBERON:0007135!1.15e-20!57;UBERON:0001017!1.03e-19!82;UBERON:0005743!2.09e-19!86;UBERON:0000955!5.84e-19!69;UBERON:0006238!5.84e-19!69;UBERON:0000073!1.00e-18!94;UBERON:0001016!1.00e-18!94;UBERON:0002616!2.73e-18!59;UBERON:0001893!3.48e-17!34;UBERON:0002020!4.46e-17!34;UBERON:0003528!4.46e-17!34;UBERON:0002791!2.13e-16!33;UBERON:0002780!2.70e-16!41;UBERON:0001890!2.70e-16!41;UBERON:0006240!2.70e-16!41;UBERON:0001869!1.41e-15!32;UBERON:0003080!1.46e-15!42;UBERON:0003075!1.27e-12!86;UBERON:0007284!1.27e-12!86;UBERON:0002619!5.25e-12!22;UBERON:0007023!2.54e-11!115;UBERON:0002346!3.31e-11!90;UBERON:0001950!1.16e-10!20;UBERON:0000956!2.08e-10!25;UBERON:0000203!2.08e-10!25;UBERON:0003056!5.07e-09!61;UBERON:0002308!8.38e-09!9;UBERON:0000125!8.38e-09!9;UBERON:0002420!9.47e-09!9;UBERON:0007245!9.47e-09!9;UBERON:0010009!9.47e-09!9;UBERON:0010011!9.47e-09!9;UBERON:0000454!9.47e-09!9;UBERON:0009663!3.11e-07!7;UBERON:0000033!6.55e-07!123;UBERON:0000153!8.08e-07!129;UBERON:0007811!8.08e-07!129|ontology_enrichment_uberon_v019=UBERON:0001893;4.26e-42;34!UBERON:0003528;1.25e-40;34!UBERON:0002020;1.25e-40;34!UBERON:0001869;1.70e-39;32!UBERON:0002791;1.75e-39;32!UBERON:0002780;3.13e-35;41!UBERON:0001890;3.13e-35;41!UBERON:0002619;3.11e-34;22!UBERON:0001950;2.41e-30;20!UBERON:0000956;1.26e-29;25!UBERON:0000203;1.26e-29;25!UBERON:0000073;2.25e-29;53!UBERON:0002616;2.25e-29;53!UBERON:0001017;7.13e-22;75!UBERON:0000125;1.57e-21;9!UBERON:0002308;1.57e-21;9!UBERON:0002420;2.57e-21;9!UBERON:0007245;2.57e-21;9!UBERON:0010009;2.57e-21;9!UBERON:0010011;2.57e-21;9!UBERON:0000454;2.57e-21;9!UBERON:0000955;3.77e-19;68!UBERON:0009663;3.38e-17;7!UBERON:0001016;2.79e-16;83!UBERON:0000200;1.90e-14;6!UBERON:0000349;4.06e-12;5!UBERON:0000369;4.42e-10;4!UBERON:0002435;4.42e-10;4!UBERON:0000204;4.42e-10;4!UBERON:0002298;6.28e-10;6!UBERON:0007023;8.04e-10;114!UBERON:0001871;8.11e-09;6!UBERON:0002021;1.90e-08;5!UBERON:0001872;1.93e-08;5!UBERON:0004732;3.31e-08;13!UBERON:0000988;3.42e-08;3!UBERON:0001870;8.64e-08;3!UBERON:0005383;1.08e-07;3!UBERON:0005382;1.08e-07;3!UBERON:0002240;2.54e-07;3!UBERON:0005174;2.54e-07;3!UBERON:0001137;2.54e-07;3!UBERON:0011216;6.90e-07;132!UBERON:0004733;9.74e-07;12!UBERON:0002028;9.74e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.22e-59,56;UBERON:0005068,1.22e-59,56;UBERON:0006241,1.22e-59,56;UBERON:0007135,1.22e-59,56;UBERON:0000073,5.10e-54,53;UBERON:0002616,5.10e-54,53;UBERON:0002780,8.27e-50,41;UBERON:0001890,8.27e-50,41;UBERON:0003080,8.27e-50,41;UBERON:0006240,8.27e-50,41;UBERON:0001893,4.68e-49,34;UBERON:0003528,9.62e-49,34;UBERON:0002020,9.62e-49,34;UBERON:0000955,1.54e-46,68;UBERON:0006238,1.54e-46,68;UBERON:0001017,2.77e-46,81;UBERON:0002791,1.71e-44,32;UBERON:0001869,1.75e-44,32;UBERON:0001016,1.24e-42,89;UBERON:0003075,2.61e-39,82;UBERON:0007284,2.61e-39,82;UBERON:0002346,6.13e-37,86;UBERON:0002619,2.27e-34,22;UBERON:0003056,7.15e-33,61;UBERON:0001950,1.44e-30,20;UBERON:0007023,2.27e-30,114;UBERON:0010371,4.58e-30,104;UBERON:0000956,9.58e-30,25;UBERON:0000203,9.58e-30,25;UBERON:0000125,1.73e-21,9;UBERON:0002308,1.73e-21,9;UBERON:0010314,2.27e-21,132;UBERON:0002420,2.41e-21,9;UBERON:0007245,2.41e-21,9;UBERON:0010009,2.41e-21,9;UBERON:0010011,2.41e-21,9;UBERON:0000454,2.41e-21,9;UBERON:0004121,1.93e-17,171;UBERON:0000924,1.93e-17,171;UBERON:0006601,1.93e-17,171;UBERON:0009663,3.53e-17,7;UBERON:0000200,1.25e-14,6;UBERON:0000025,1.30e-12,192;UBERON:0000349,4.69e-12,5;UBERON:0011216,2.52e-11,223;UBERON:0003076,3.30e-11,15;UBERON:0003057,3.30e-11,15;UBERON:0000369,4.44e-10,4;UBERON:0002435,4.44e-10,4;UBERON:0000204,4.44e-10,4;UBERON:0010082,4.44e-10,4;UBERON:0002298,7.14e-10,6;UBERON:0004111,4.42e-09,240;UBERON:0001871,6.89e-09,6;UBERON:0002021,1.87e-08,5;UBERON:0001872,1.94e-08,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51125 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24876 | |||
|TSSclassifier=S | |||
|UniProt=Q7Z5G4 | |||
|association_with_transcript=9bp_to_ENST00000357743,NM_001002296,uc003xnw.2_5end | |||
|description=CAGE_peak_5_at_GOLGA7_5end | |||
|id=chr8:41348182..41348193,+ | |||
|ontology_enrichment_celltype=CL:0000094!8.35e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000094;1.13e-18;8!CL:0000081;3.86e-13;11!CL:0000624;9.58e-09;6!CL:0000775;2.11e-08;3!CL:0000791;3.61e-08;18!CL:0000789;3.61e-08;18!CL:0002419;3.61e-08;18!CL:0000623;1.89e-07;3!CL:0000767;4.39e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,9.58e-19,8;CL:0000081,3.43e-13,11;CL:0000624,7.83e-09,6;CL:0000775,1.74e-08,3;CL:0000791,3.57e-08,18;CL:0000789,3.57e-08,18;CL:0002420,3.57e-08,18;CL:0002419,3.57e-08,18;CL:0000790,3.57e-08,18;CL:0000623,1.77e-07,3;CL:0000825,1.77e-07,3;CL:0000767,4.45e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.06e-12;82!CL:0000790;3.61e-08;18!UBERON:0006241;2.54e-07;3!UBERON:0003057;2.54e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p5@GOLGA7 | |||
}} |
Revision as of 05:18, 14 September 2013
Short description: | p5@GOLGA7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_GOLGA7_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000357743, NM_001002296, uc003xnw.2_5end |
EntrezGene: | GOLGA7 |
HGNC: | 24876 |
UniProt: | Q7Z5G4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 9.58e-19 | 8 |
blood cell | 3.43e-13 | 11 |
CD4-positive, alpha-beta T cell | 7.83e-09 | 6 |
neutrophil | 1.74e-08 | 3 |
mature alpha-beta T cell | 3.57e-08 | 18 |
alpha-beta T cell | 3.57e-08 | 18 |
immature T cell | 3.57e-08 | 18 |
mature T cell | 3.57e-08 | 18 |
immature alpha-beta T cell | 3.57e-08 | 18 |
natural killer cell | 1.77e-07 | 3 |
pro-NK cell | 1.77e-07 | 3 |
basophil | 4.45e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.