FFCP PHASE1:Hg19::chrX:130423240..130423288,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3547|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5948|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000370901,ENST00000370910_5end|coexpression_cluster_id=C115|description=CAGE_peak_1_at_IGSF1_5end|id=chrX:130423240..130423288,-|ontology_enrichment_celltype=CL:0000047!6.38e-08!8;CL:0002319!9.02e-07!25|ontology_enrichment_celltype_v019=CL:0000540;8.63e-08;6!CL:0000404;8.63e-08;6!CL:0002322;1.80e-07;5|ontology_enrichment_celltype_v019_2=CL:0000047,2.71e-10,8;CL:0000540,8.33e-08,6;CL:0000031,8.33e-08,6;CL:0000404,8.33e-08,6;CL:0002322,1.80e-07,5|ontology_enrichment_development_v019=UBERON:0006601;4.78e-11;82!CL:0000031;8.63e-08;6!UBERON:0009117;1.33e-07;10!UBERON:0005564;1.33e-07;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!5.14e-41!86;UBERON:0001017!1.55e-40!82;UBERON:0000073!3.10e-38!94;UBERON:0001016!3.10e-38!94;UBERON:0001049!3.79e-37!57;UBERON:0005068!3.79e-37!57;UBERON:0006241!3.79e-37!57;UBERON:0007135!3.79e-37!57;UBERON:0007023!2.76e-36!115;UBERON:0003075!2.63e-34!86;UBERON:0007284!2.63e-34!86;UBERON:0002346!1.97e-31!90;UBERON:0002616!4.06e-31!59;UBERON:0000955!4.44e-31!69;UBERON:0006238!4.44e-31!69;UBERON:0003080!7.41e-27!42;UBERON:0002780!3.82e-26!41;UBERON:0001890!3.82e-26!41;UBERON:0006240!3.82e-26!41;UBERON:0003056!7.19e-25!61;UBERON:0004121!2.31e-23!169;UBERON:0000924!5.56e-22!173;UBERON:0006601!5.56e-22!173;UBERON:0002020!4.13e-21!34;UBERON:0003528!4.13e-21!34;UBERON:0000153!5.01e-21!129;UBERON:0007811!5.01e-21!129;UBERON:0001893!5.13e-21!34;UBERON:0000033!1.94e-20!123;UBERON:0002791!2.32e-20!33;UBERON:0001869!1.49e-19!32;UBERON:0000025!2.52e-15!194;UBERON:0000119!2.59e-15!312;UBERON:0000483!3.72e-15!309;UBERON:0000956!8.08e-15!25;UBERON:0000203!8.08e-15!25;UBERON:0002619!1.81e-13!22;UBERON:0000477!2.02e-13!286;UBERON:0004111!3.06e-13!241;UBERON:0001950!5.17e-12!20;UBERON:0003076!2.93e-11!15;UBERON:0003057!2.93e-11!15;UBERON:0000481!6.20e-11!347;UBERON:0000475!7.18e-11!365;UBERON:0000922!2.85e-10!612;UBERON:0000064!2.86e-10!219;UBERON:0004732!1.18e-09!13;UBERON:0000468!1.38e-09!659;UBERON:0004733!4.52e-09!12;UBERON:0002028!4.52e-09!12;UBERON:0007277!4.52e-09!12;UBERON:0002308!7.53e-08!9;UBERON:0000125!7.53e-08!9;UBERON:0002050!9.72e-08!605;UBERON:0005423!9.72e-08!605;UBERON:0000467!9.77e-08!625;UBERON:0000480!1.25e-07!626;UBERON:0003135!1.48e-07!11;UBERON:0002298!1.56e-07!8;UBERON:0000923!1.71e-07!604;UBERON:0005291!1.71e-07!604;UBERON:0006598!1.71e-07!604;UBERON:0002532!1.71e-07!604;UBERON:0002420!2.41e-07!9;UBERON:0007245!2.41e-07!9;UBERON:0010009!2.41e-07!9;UBERON:0010011!2.41e-07!9;UBERON:0000454!2.41e-07!9;UBERON:0002680!7.57e-07!9;UBERON:0001895!7.57e-07!9;UBERON:0010092!7.57e-07!9|ontology_enrichment_uberon_v019=UBERON:0000073;3.12e-24;53!UBERON:0002616;3.12e-24;53!UBERON:0002780;6.05e-23;41!UBERON:0001890;6.05e-23;41!UBERON:0001893;8.19e-22;34!UBERON:0003528;1.22e-21;34!UBERON:0002020;1.22e-21;34!UBERON:0002791;5.97e-21;32!UBERON:0001869;8.73e-21;32!UBERON:0001017;9.06e-17;75!UBERON:0000956;1.14e-16;25!UBERON:0000203;1.14e-16;25!UBERON:0000955;4.39e-16;68!UBERON:0002619;5.66e-15;22!UBERON:0001016;4.72e-14;83!UBERON:0001950;4.88e-13;20!UBERON:0004732;9.85e-13;13!UBERON:0004733;6.66e-12;12!UBERON:0002028;6.66e-12;12!UBERON:0007023;2.24e-11;114!UBERON:0000125;3.30e-10;9!UBERON:0002308;3.30e-10;9!UBERON:0003135;4.76e-10;11!UBERON:0002420;1.98e-09;9!UBERON:0007245;1.98e-09;9!UBERON:0010009;1.98e-09;9!UBERON:0010011;1.98e-09;9!UBERON:0000454;1.98e-09;9!UBERON:0002680;7.37e-09;9!UBERON:0001895;7.37e-09;9!UBERON:0001894;1.61e-08;7!UBERON:0000473;3.48e-08;8!UBERON:0009663;3.77e-08;7!UBERON:0002298;6.83e-08;6|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.98e-47,81;UBERON:0001049,2.38e-46,56;UBERON:0005068,2.38e-46,56;UBERON:0006241,2.38e-46,56;UBERON:0007135,2.38e-46,56;UBERON:0001016,2.97e-45,89;UBERON:0003075,2.32e-43,82;UBERON:0007284,2.32e-43,82;UBERON:0000073,3.63e-43,53;UBERON:0002616,3.63e-43,53;UBERON:0002346,2.78e-40,86;UBERON:0007023,1.59e-37,114;UBERON:0000955,4.56e-36,68;UBERON:0006238,4.56e-36,68;UBERON:0010371,7.32e-33,104;UBERON:0002780,2.54e-32,41;UBERON:0001890,2.54e-32,41;UBERON:0003080,2.54e-32,41;UBERON:0006240,2.54e-32,41;UBERON:0003056,7.92e-32,61;UBERON:0004121,1.05e-27,171;UBERON:0000924,1.05e-27,171;UBERON:0006601,1.05e-27,171;UBERON:0010314,2.79e-27,132;UBERON:0003528,1.73e-25,34;UBERON:0002020,1.73e-25,34;UBERON:0001893,2.29e-25,34;UBERON:0002791,1.96e-23,32;UBERON:0001869,2.17e-23,32;UBERON:0011216,1.71e-17,223;UBERON:0000025,4.98e-17,192;UBERON:0000956,5.20e-17,25;UBERON:0000203,5.20e-17,25;UBERON:0002619,3.75e-15,22;UBERON:0003076,7.21e-15,15;UBERON:0003057,7.21e-15,15;UBERON:0004111,8.92e-15,240;UBERON:0001950,3.20e-13,20;UBERON:0000483,1.13e-12,306;UBERON:0004732,1.14e-12,13;UBERON:0000119,2.76e-12,309;UBERON:0004733,7.23e-12,12;UBERON:0002028,7.23e-12,12;UBERON:0007277,7.23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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3547 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5948 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000370901,ENST00000370910_5end | |||
|coexpression_cluster_id=C115 | |||
|description=CAGE_peak_1_at_IGSF1_5end | |||
|id=chrX:130423240..130423288,- | |||
|ontology_enrichment_celltype=CL:0000047!6.38e-08!8;CL:0002319!9.02e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000540;8.63e-08;6!CL:0000404;8.63e-08;6!CL:0002322;1.80e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.71e-10,8;CL:0000540,8.33e-08,6;CL:0000031,8.33e-08,6;CL:0000404,8.33e-08,6;CL:0002322,1.80e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.78e-11;82!CL:0000031;8.63e-08;6!UBERON:0009117;1.33e-07;10!UBERON:0005564;1.33e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000073;3.12e-24;53!UBERON:0002616;3.12e-24;53!UBERON:0002780;6.05e-23;41!UBERON:0001890;6.05e-23;41!UBERON:0001893;8.19e-22;34!UBERON:0003528;1.22e-21;34!UBERON:0002020;1.22e-21;34!UBERON:0002791;5.97e-21;32!UBERON:0001869;8.73e-21;32!UBERON:0001017;9.06e-17;75!UBERON:0000956;1.14e-16;25!UBERON:0000203;1.14e-16;25!UBERON:0000955;4.39e-16;68!UBERON:0002619;5.66e-15;22!UBERON:0001016;4.72e-14;83!UBERON:0001950;4.88e-13;20!UBERON:0004732;9.85e-13;13!UBERON:0004733;6.66e-12;12!UBERON:0002028;6.66e-12;12!UBERON:0007023;2.24e-11;114!UBERON:0000125;3.30e-10;9!UBERON:0002308;3.30e-10;9!UBERON:0003135;4.76e-10;11!UBERON:0002420;1.98e-09;9!UBERON:0007245;1.98e-09;9!UBERON:0010009;1.98e-09;9!UBERON:0010011;1.98e-09;9!UBERON:0000454;1.98e-09;9!UBERON:0002680;7.37e-09;9!UBERON:0001895;7.37e-09;9!UBERON:0001894;1.61e-08;7!UBERON:0000473;3.48e-08;8!UBERON:0009663;3.77e-08;7!UBERON:0002298;6.83e-08;6 | |||
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| |||
|short_description=p1@IGSF1 | |||
}} |
Revision as of 10:44, 14 September 2013
Short description: | p1@IGSF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_IGSF1_5end |
Coexpression cluster: | C115_pituitary_Neural_caudate_putamen_amygdala_medulla_hippocampus |
Association with transcript: | 0bp_to_ENST00000370901, ENST00000370910_5end |
EntrezGene: | IGSF1 |
HGNC: | 5948 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.71e-10 | 8 |
neuron | 8.33e-08 | 6 |
neuroblast | 8.33e-08 | 6 |
electrically signaling cell | 8.33e-08 | 6 |
embryonic stem cell | 1.80e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.