FFCP PHASE1:Hg19::chr16:55516984..55517009,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C351 | |||
|description=CAGE_peak_at_chr16:55516984..55517009,+ | |||
|id=chr16:55516984..55517009,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.29e-32!180;CL:0000680!9.45e-17!57;CL:0000056!9.45e-17!57;CL:0000355!9.45e-17!57;CL:0000057!7.44e-16!75;CL:0000187!5.36e-15!54;CL:0000183!1.94e-14!59;CL:0000192!3.85e-14!42;CL:0000514!3.85e-14!42;CL:0000222!5.39e-13!119;CL:0000359!3.96e-12!32;CL:0000393!5.77e-12!60;CL:0000211!5.77e-12!60;CL:0000048!3.53e-10!430;CL:0000723!2.12e-09!436;CL:0000034!3.97e-09!444;CL:0002371!4.94e-08!591;CL:0000144!9.84e-08!625;CL:0002494!1.27e-07!16;CL:0002334!1.58e-07!12;CL:0002620!5.97e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.22e-12;32!CL:0002539;2.69e-10;10!CL:0000136;3.10e-09;13!CL:0000192;5.41e-09;43!CL:0002334;1.02e-08;12!CL:0000134;1.38e-08;55!CL:0002620;5.49e-08;23!CL:0000048;1.75e-07;58!CL:0000723;1.83e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.28e-19,427;CL:0000723,6.77e-19,433;CL:0000034,5.76e-18,441;CL:0000057,6.72e-16,76;CL:0000359,7.32e-12,32;CL:0000192,9.84e-12,43;CL:0000514,9.84e-12,43;CL:0000136,1.45e-11,15;CL:0000680,1.47e-11,58;CL:0000056,1.47e-11,58;CL:0000355,1.47e-11,58;CL:0002320,3.04e-11,361;CL:0000134,1.74e-10,354;CL:0002539,7.28e-10,10;CL:0000187,1.83e-09,55;CL:0002334,8.90e-09,12;CL:0000219,2.03e-08,386;CL:0002620,5.71e-08,23;CL:0000393,7.07e-08,61;CL:0000211,7.07e-08,61;CL:0000569,7.98e-07,4;CL:0000011,7.98e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;5.41e-09;43 | |||
|ontology_enrichment_disease=DOID:2394!9.12e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.14e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.74e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0004872!8.90e-19!84;UBERON:0001981!8.94e-17!60;UBERON:0007500!8.94e-17!60;UBERON:0004537!8.94e-17!60;UBERON:0006965!8.94e-17!60;UBERON:0002385!1.18e-16!63;UBERON:0001015!1.18e-16!63;UBERON:0000383!1.18e-16!63;UBERON:0001134!4.08e-16!61;UBERON:0002036!4.08e-16!61;UBERON:0003082!4.08e-16!61;UBERON:0001637!5.36e-16!42;UBERON:0003509!5.36e-16!42;UBERON:0004572!5.36e-16!42;UBERON:0000914!1.55e-15!83;UBERON:0002329!1.55e-15!83;UBERON:0003077!1.55e-15!83;UBERON:0003059!1.55e-15!83;UBERON:0007282!1.55e-15!83;UBERON:0009618!1.55e-15!83;UBERON:0007285!1.55e-15!83;UBERON:0004290!4.74e-15!70;UBERON:0000055!2.09e-14!69;UBERON:0002049!3.38e-14!79;UBERON:0007798!3.38e-14!79;UBERON:0004573!3.93e-14!33;UBERON:0004571!3.93e-14!33;UBERON:0000486!4.82e-12!82;UBERON:0004535!6.82e-12!110;UBERON:0001009!1.28e-11!113;UBERON:0005256!5.00e-11!143;UBERON:0000490!1.85e-10!138;UBERON:0003914!2.01e-10!118;UBERON:0000947!2.21e-09!21;UBERON:0010191!2.21e-09!21;UBERON:0002100!2.26e-08!216;UBERON:0001135!1.00e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.09e-16;33!UBERON:0004571;5.09e-16;33!UBERON:0001637;4.39e-14;42!UBERON:0003509;4.39e-14;42!UBERON:0004572;4.39e-14;42!UBERON:0000947;1.03e-13;21!UBERON:0010191;1.03e-13;21!UBERON:0004457;6.23e-11;9!UBERON:0000042;6.23e-11;9!UBERON:0004237;2.69e-10;10!UBERON:0004695;2.69e-10;10!UBERON:0002111;2.69e-10;10!UBERON:0004178;2.69e-10;10!UBERON:0003688;6.84e-10;6!UBERON:0002358;6.84e-10;6!UBERON:0003684;6.84e-10;6!UBERON:0001178;6.84e-10;6!UBERON:0001135;1.50e-07;15!UBERON:0002385;2.73e-07;31!UBERON:0001015;2.73e-07;31!UBERON:0000383;2.73e-07;31!UBERON:0007500;3.13e-07;56!UBERON:0001981;3.13e-07;56!UBERON:0004537;3.13e-07;56!UBERON:0002384;4.51e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,3.93e-18,42;UBERON:0003509,3.93e-18,42;UBERON:0004572,3.93e-18,42;UBERON:0004573,6.65e-18,33;UBERON:0004571,6.65e-18,33;UBERON:0000947,1.59e-13,21;UBERON:0010191,1.59e-13,21;UBERON:0007500,1.34e-12,59;UBERON:0001981,1.34e-12,59;UBERON:0004537,1.34e-12,59;UBERON:0006965,1.34e-12,59;UBERON:0004872,2.90e-12,83;UBERON:0002384,3.17e-11,371;UBERON:0001134,3.80e-11,62;UBERON:0002036,3.80e-11,62;UBERON:0003082,3.80e-11,62;UBERON:0007524,7.41e-11,73;UBERON:0002385,1.52e-10,64;UBERON:0001015,1.52e-10,64;UBERON:0000383,1.52e-10,64;UBERON:0002329,2.22e-10,71;UBERON:0003059,2.22e-10,71;UBERON:0007282,2.22e-10,71;UBERON:0004290,2.22e-10,71;UBERON:0009618,2.22e-10,71;UBERON:0003077,4.05e-10,72;UBERON:0007285,4.05e-10,72;UBERON:0000926,4.61e-10,315;UBERON:0004120,4.61e-10,315;UBERON:0006603,4.61e-10,315;UBERON:0003688,5.45e-10,6;UBERON:0002358,5.45e-10,6;UBERON:0003684,5.45e-10,6;UBERON:0001178,5.45e-10,6;UBERON:0004237,7.28e-10,10;UBERON:0004695,7.28e-10,10;UBERON:0002111,7.28e-10,10;UBERON:0004178,7.28e-10,10;UBERON:0000055,7.72e-10,68;UBERON:0007503,1.93e-09,78;UBERON:0000486,2.39e-09,83;UBERON:0005256,4.51e-09,122;UBERON:0003914,1.97e-08,117;UBERON:0002049,3.12e-08,78;UBERON:0007798,3.12e-08,78;UBERON:0004457,9.14e-08,12;UBERON:0000042,9.14e-08,12;UBERON:0002199,1.41e-07,46;UBERON:0002416,1.41e-07,46;UBERON:0001135,3.34e-07,15;UBERON:0002100,3.49e-07,199;UBERON:0004535,4.92e-07,109;UBERON:0000490,9.50e-07,148 | |||
|phase1_expression=3.81524596468169,5.78071414505655,3.94672331468719,6.00439790118782,8.93922188854576,3.48935409640147,5.06599756336621,5.05375898741465,7.05201196139564,0,0,0,0,0.37129905888014,0.662794751455832,4.03395087871065,1.20538905604795,5.11217063271161,1.46379839637152,0.61560529038394,0.408001382488506,1.25381888591235,0,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0.361439152384566,0,0.869079113764942,2.3858578411533,5.35298357332899,0,0,0.175669571386252,0.327447688744282,0,0,0,0,0,0,0,0,0.198762407366705,1.72046919021225,1.38856200643038,0,1.67799774483962,0.825354125820202,0.626984899610432,0,0,0,0.402829317109147,0,0.732186172644509,0,3.24056779152704,0.357198913136319,0,0.112611480483322,0,0,0.549605231791222,0,0,0,1.49091585508596,2.91250176828533,1.72131935057184,12.6208113129478,3.54668382198357,0.560677600142307,1.06748995729705,1.72667283892012,0.622422070799533,0.269421344139376,0.653847612453835,1.21085942115945,0.576175924479999,0.234321431833797,1.5608003841516,0,0.747243402759005,0,0,0.140450806702248,0,0.122834317311768,0.619954687054593,5.94001428641027,6.67620709052104,0,0.718618141816238,0,0.125118519871964,0.277064115484183,0,1.22595118319608,4.95785594391769,0,1.25572744982203,2.13557388818567,1.69545520927649,1.80054657650641,2.88547081867629,0,2.04728541964749,2.19409231913646,1.65642908774038,0.504867548488229,2.39329736469978,2.7479829659198,1.42003837006646,1.0075209822764,0.847802961552438,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0,0,0,0,1.92972281457866,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0.297262324577456,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0.763976851116555,0,1.71072446022705,0.102827492703324,0,0,0.112131084345361,0,0.07333828582095,2.45616259939778,0,0,5.31876233169741,3.12022310734098,0,0,0.266422179016099,0.714889968290738,1.08524321078289,0,0,0,0.791951872933429,0.301439377059586,0.871533458600294,0,0,0,0,0,0,0,1.73737568001095,2.67119219315498,2.14873155887875,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,1.00034104211935,0,1.03985430765404,1.78428988797162,1.10391690523754,0.937131319941706,1.20378439891088,13.6444502433591,14.4862299809507,0.664225598535437,1.47495334833363,1.65078867489357,1.95801157462741,1.71571711905428,0,0,0,0,0,0.604780586659361,6.20269519546942,1.68808170616869,7.85848264412606,4.48487022394953,2.55853624533352,4.98647155545183,0,0.616838775210622,3.01854933032316,0.9033987161519,1.55776328755086,1.39452454151951,0,1.80455823272956,0,2.75554675595056,1.63882051206045,2.62248829918848,0,0.0770153371044148,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0.325378394664303,0.721287081534056,0.0915694648183434,0,0,0,1.6068392984416,2.12675580242668,0.462145851343933,0.15350367472613,0,0.751941714077915,1.0151168573996,0.255679882248303,0.801288320820636,0.330569830721956,0.192190067365106,0,0,2.32422774648643,8.18512101759664,1.3940745403212,2.15623506123262,1.06461206063404,0,4.26245703939016,0.572499546967965,0,0.316379424718726,0.571890581771475,0.255897791311334,0.855877976067841,0.636406495851874,0,1.2591072030832,0.823611089208164,0.471249609382746,1.61745985258653,1.58510321173008,2.10629228119491,0,0.487426979262569,2.11300293513511,0.545999645631943,4.10075752665767,2.26016233240486,1.65409603063837,1.32687795048244,2.19225442626881,3.47265320560013,1.31178950409327,0.608731130888112,1.8589409885985,0,0.430234056612155,0.0982490410131212,1.78335525740625,0,3.37772216476263,4.93942339439853,0.379473173765715,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842391534340376,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0.556543525114529,0,0,0.398495976502139,0,0,0.306806047506464,0,1.55519793830904,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,3.76008784295104,0,1.07709173291727,0,0.31900115973192,3.75550132947635,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.695052375913368,0,0,0,0,0,0,0,0.277349346026277,0,0,0.0870592065804026,1.7472666824203,0,0,0,0,0.387956065953678,0,1.12990370390266,0,0.397429223405979,0,0,0.0801588202515337,0.85381197895741,0,0,0,0,0,0,0,0.271808412147228,0,0.815985741090574,0.866851769704557,0,0,0,0.859530882839914,0,1.39641200636127,0.229160424011684,0.717873024576814,0,0.858452096273142,0,0,2.88239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,1.62899880526114,0.864221491201268,0.979762080328227,0,0,0.340776043570843,0.226624183040251,0,0,0,0,0,0,0.533937062838473,0.628817220398664,0,0.496166021811951,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0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| |||
|short_description=p@chr16:55516984..55517009,+ | |||
}} |
Revision as of 03:38, 12 January 2014
Short description: | p@chr16:55516984..55517009, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:55516984..55517009, + |
Coexpression cluster: | C351_Fibroblast_Smooth_mesenchymal_Adipocyte_tenocyte_Synoviocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.28e-19 | 427 |
somatic stem cell | 6.77e-19 | 433 |
stem cell | 5.76e-18 | 441 |
fibroblast | 6.72e-16 | 76 |
vascular associated smooth muscle cell | 7.32e-12 | 32 |
smooth muscle cell | 9.84e-12 | 43 |
smooth muscle myoblast | 9.84e-12 | 43 |
fat cell | 1.45e-11 | 15 |
muscle precursor cell | 1.47e-11 | 58 |
myoblast | 1.47e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.47e-11 | 58 |
connective tissue cell | 3.04e-11 | 361 |
mesenchymal cell | 1.74e-10 | 354 |
aortic smooth muscle cell | 7.28e-10 | 10 |
muscle cell | 1.83e-09 | 55 |
preadipocyte | 8.90e-09 | 12 |
motile cell | 2.03e-08 | 386 |
skin fibroblast | 5.71e-08 | 23 |
electrically responsive cell | 7.07e-08 | 61 |
electrically active cell | 7.07e-08 | 61 |
cardiac mesenchymal cell | 7.98e-07 | 4 |
migratory trunk neural crest cell | 7.98e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.74e-11 | 14 |