FFCP PHASE1:Hg19::chr1:235813034..235813097,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2786 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4407 | |||
|TSSclassifier=weak | |||
|UniProt=P50150,B1APZ0 | |||
|association_with_transcript=195bp_to_ENST00000391854,NM_001098722,uc001hxe.3_5end | |||
|coexpression_cluster_id=C1472 | |||
|description=CAGE_peak_1_at_GNG4_5end | |||
|id=chr1:235813034..235813097,- | |||
|ontology_enrichment_celltype=CL:0002319!4.41e-11!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.20e-12;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.95e-12,25;CL:0000047,4.55e-08,8;CL:0000133,2.72e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.42e-12;82 | |||
|ontology_enrichment_disease=DOID:0050687!7.41e-15!143;DOID:162!6.30e-11!235;DOID:14566!2.64e-10!239;DOID:305!1.03e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:171;6.61e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.12e-14,143;DOID:162,2.77e-13,235;DOID:14566,2.31e-12,239;DOID:305,4.72e-09,106;DOID:171,7.05e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!8.52e-38!94;UBERON:0001016!8.52e-38!94;UBERON:0005743!1.07e-35!86;UBERON:0001017!1.81e-35!82;UBERON:0001049!1.59e-28!57;UBERON:0005068!1.59e-28!57;UBERON:0006241!1.59e-28!57;UBERON:0007135!1.59e-28!57;UBERON:0000955!5.06e-28!69;UBERON:0006238!5.06e-28!69;UBERON:0002346!3.15e-26!90;UBERON:0003075!1.47e-24!86;UBERON:0007284!1.47e-24!86;UBERON:0002616!2.06e-23!59;UBERON:0000924!2.09e-23!173;UBERON:0006601!2.09e-23!173;UBERON:0002780!1.94e-22!41;UBERON:0001890!1.94e-22!41;UBERON:0006240!1.94e-22!41;UBERON:0004121!6.52e-22!169;UBERON:0003080!2.31e-21!42;UBERON:0002020!1.38e-19!34;UBERON:0003528!1.38e-19!34;UBERON:0001893!1.97e-19!34;UBERON:0000153!4.71e-19!129;UBERON:0007811!4.71e-19!129;UBERON:0002791!6.77e-19!33;UBERON:0001869!8.14e-19!32;UBERON:0003056!1.66e-18!61;UBERON:0000033!2.43e-18!123;UBERON:0000956!7.80e-15!25;UBERON:0000203!7.80e-15!25;UBERON:0007023!1.54e-14!115;UBERON:0002619!1.31e-13!22;UBERON:0001950!1.39e-12!20;UBERON:0000064!9.44e-11!219;UBERON:0000062!1.28e-09!511;UBERON:0003076!2.73e-08!15;UBERON:0003057!2.73e-08!15;UBERON:0000922!8.68e-08!612;UBERON:0004732!3.28e-07!13;UBERON:0000063!6.54e-07!97;UBERON:0004733!9.44e-07!12;UBERON:0002028!9.44e-07!12;UBERON:0007277!9.44e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.16e-22;32!UBERON:0003528;5.74e-22;34!UBERON:0002020;5.74e-22;34!UBERON:0002791;7.01e-22;32!UBERON:0001893;9.53e-22;34!UBERON:0002780;2.62e-21;41!UBERON:0001890;2.62e-21;41!UBERON:0000073;1.32e-20;53!UBERON:0002616;1.32e-20;53!UBERON:0000956;5.09e-19;25!UBERON:0000203;5.09e-19;25!UBERON:0002619;1.87e-17;22!UBERON:0000955;9.52e-17;68!UBERON:0001016;3.16e-16;83!UBERON:0001950;4.26e-16;20!UBERON:0001017;6.36e-16;75!UBERON:0000922;5.17e-12;49!UBERON:0004732;5.14e-09;13!UBERON:0004733;2.09e-08;12!UBERON:0002028;2.09e-08;12!UBERON:0000125;1.05e-07;9!UBERON:0002308;1.05e-07;9!UBERON:0002420;1.17e-07;9!UBERON:0007245;1.17e-07;9!UBERON:0010009;1.17e-07;9!UBERON:0010011;1.17e-07;9!UBERON:0000454;1.17e-07;9!UBERON:0011216;2.28e-07;132!UBERON:0002680;8.09e-07;9!UBERON:0001895;8.09e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.76e-47,89;UBERON:0001017,1.89e-45,81;UBERON:0001049,1.52e-38,56;UBERON:0005068,1.52e-38,56;UBERON:0006241,1.52e-38,56;UBERON:0007135,1.52e-38,56;UBERON:0000955,1.32e-36,68;UBERON:0006238,1.32e-36,68;UBERON:0000073,2.34e-36,53;UBERON:0002616,2.34e-36,53;UBERON:0011216,1.84e-31,223;UBERON:0002346,4.26e-30,86;UBERON:0002780,4.38e-29,41;UBERON:0001890,4.38e-29,41;UBERON:0003080,4.38e-29,41;UBERON:0006240,4.38e-29,41;UBERON:0003075,5.93e-28,82;UBERON:0007284,5.93e-28,82;UBERON:0004121,2.25e-25,171;UBERON:0000924,2.25e-25,171;UBERON:0006601,2.25e-25,171;UBERON:0003528,2.56e-25,34;UBERON:0002020,2.56e-25,34;UBERON:0001893,4.09e-25,34;UBERON:0001869,2.67e-24,32;UBERON:0002791,8.60e-24,32;UBERON:0003056,1.20e-21,61;UBERON:0010371,8.04e-21,104;UBERON:0000956,4.78e-19,25;UBERON:0000203,4.78e-19,25;UBERON:0002619,1.98e-17,22;UBERON:0007023,1.17e-16,114;UBERON:0001950,4.44e-16,20;UBERON:0010314,4.53e-13,132;UBERON:0003076,1.99e-10,15;UBERON:0003057,1.99e-10,15;UBERON:0004732,5.22e-09,13;UBERON:0004733,2.09e-08,12;UBERON:0002028,2.09e-08,12;UBERON:0007277,2.09e-08,12;UBERON:0000125,1.06e-07,9;UBERON:0002308,1.06e-07,9;UBERON:0002420,1.19e-07,9;UBERON:0007245,1.19e-07,9;UBERON:0010009,1.19e-07,9;UBERON:0010011,1.19e-07,9;UBERON:0000454,1.19e-07,9;UBERON:0002680,7.91e-07,9;UBERON:0001895,7.91e-07,9;UBERON:0010092,7.91e-07,9 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,1.22866968250754,0,8.95609625733706,3.69273769519835,0.37129905888014,0.331397375727916,0,0,0,0,6.64853713614655,3.87601313364081,4.38836610069323,5.43848375549008,8.89683762973747,4.89616294419731,0,0,0,0,0.383829398097213,0.619264493264304,0,0.30120591877825,0,0,0,0,1.10799081706375,0.200544447470142,0.434021741431704,0,0,0,0.145398238779565,0.377875943688809,0.485168122375632,0.232429036905685,0,0.619412741790207,0.575384784644301,0.256160706529101,0,0,0,0,0.188242339542605,0.545812300115692,0.449446968890169,0.918251677112708,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0.580418477257168,0.56738522469114,0.622822248995575,0,0,0,0.605399502633369,0.736555271975129,0.316462387440884,0,0.212604299965044,0,0.22465726229299,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,1.68152568894461,0,0,0,0.205601498999509,0,0,0,0,0.334231370655521,0,0,0,0.128091319725675,0.130059347559878,1.80881695064044,0.552700035571697,1.15921234294021,0,0,0,1.24640276967323,0.383220493601921,0.68725489096526,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,1.32348744029695,0.221729397462564,0.087834785693126,3.47094550068939,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0.339121184620975,0,0,0,3.90315859614705,3.18071443971565,3.83440011469411,4.35376431064556,4.03713361401005,9.12443397689575,0,0,0,0,0,0.473227200159376,0.842923450390509,0.723033089650446,1.54411561825352,0.871517776369625,0.71181185733329,1.07865046528132,0.98110732562673,0.769494313892781,0,0,0.4115740113314,0,0,0,0.590789906681404,23.3975442689765,15.7425201335185,0.171567810298526,0,0,0.100528972411631,0.185176890317059,0.325808305310325,1.03993478527958,0,2.55046890945169,0.117408694235822,0,0,0,4.74122638775565,1.71697232418975,0,0,0,0,0,0.141775097242386,0,0,0,0.492663237895943,0,0.414656231081544,0,0,0.507983154337352,0,0,3.4214489204541,0,0.300343057843917,0,0.336393253036082,0,0.36669142910475,0,0,0,0,0,0.514414748524284,1.41849132023278,0.266422179016099,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0.358121926479791,0,0.197030760201927,0,0,10.6719742173435,26.0279707715243,40.9843070772179,25.462472330821,40.1901413541493,0,0,0,0.858840442033979,0.500170521059677,0.813795071099207,2.49565033836969,0,0,0,0,0,0,0.664225598535437,0.184369168541703,0,0.391602314925481,2.40200396667599,0.206768026122887,0.215714200818617,0.213455115606889,3.94065842880137,1.66435439510497,21.1673205330776,0,0.153461973288062,0.280660094433074,0,2.04682899626681,0,0,0,0,0,0,0,9.66875596732978,0,0.0920809889358963,0,0,0,0.451199612907412,0.308061348417659,0,0,0.316654886678627,0,0.170093705276516,0,0,0.270946437543853,0,0.254876273045038,0,0.671624264166535,0,0,1.79515087581472,0.328014645699706,0.650756789328606,0.309123034943167,4.12062591682545,3.63041799650587,0,0,0,0,0.462145851343933,0,0.275673144969061,0,0,0.340906509664404,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0.563391205064483,0.430234056612155,0.0982490410131212,0,0.354761064070598,0,0,0,0.349934720244983,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,3.63201841833409,0.962479855263359,1.71528151186722,3.90186667764009,0,0,6.69590345461054,2.19537308576098,0,0,0.324621940274555,0,0,0,0,1.18504244461122,0,0,0,0,2.15068535015921,2.01308497103174,1.50164227540718,0,0,0,1.89318974933188,0,1.4098700508785,0,0,1.8204078262427,0,8.52408440419239,0.71623345421307,0,0,10.9356241254293,12.0975698113041,0,0,0,0.796991953004279,3.03912307084262,56.6848682672121,4.2952846650905,0,0,0,0.179021174675609,0,0.493217028184668,0,2.22273980289274,20.3559876679996,7.69975214743365,57.8880014203463,0,0,0,28.4483620713749,3.30529745380596,8.27356886187777,145.481703507898,16.9130675762288,41.8436237789234,20.3720518737183,18.330658671062,7.62908681585416,8.84634079449797,13.0040952339561,10.5304990633907,0,2.09135616417905,1.61595542857974,0.341826167541004,0.922255617552241,0.359030577639089,9.77826347298073,0.638002319463839,0.0915975934018623,1.5991043280559,0,1.8837630767403,0,0,0,0,0,0,8.86191871017714,0,2.12029607150911,3.24582959613137,1.99052386215701,1.94606641907346,3.05515072466813,12.1573662759055,23.106456582996,23.2860947397165,8.35774048960395,0.802577647298789,12.6502800691683,0.364909578431332,13.6965233252463,0.971121518136371,1.18375320854817,9.67925728389311,24.1797481688087,0.947798694427319,3.00646838828985,4.97703318706786,3.98792323624311,2.64793564700399,2.19753042885058,5.97362148864794,2.84609546029793,0.13867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| |||
|short_description=p1@GNG4 | |||
}} |
Revision as of 00:52, 11 January 2014
Short description: | p1@GNG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GNG4_5end |
Coexpression cluster: | C1472_nonsmall_neuroblastoma_small_tubular_carcinoid_smallcell_merkel |
Association with transcript: | 195bp_to_ENST00000391854, NM_001098722, uc001hxe.3_5end |
EntrezGene: | GNG4 |
HGNC: | 4407 |
UniProt: | P50150B1APZ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.95e-12 | 25 |
neuronal stem cell | 4.55e-08 | 8 |
neurectodermal cell | 2.72e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.12e-14 | 143 |
cancer | 2.77e-13 | 235 |
disease of cellular proliferation | 2.31e-12 | 239 |
carcinoma | 4.72e-09 | 106 |
neuroectodermal tumor | 7.05e-08 | 10 |