FFCP PHASE1:Hg19::chr2:197143317..197143335,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57520 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29853 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=67bp_to_ENST00000462290_5end | |||
|coexpression_cluster_id=C4165 | |||
|description=CAGE_peak_14_at_HECW2_5end | |||
|id=chr2:197143317..197143335,- | |||
|ontology_enrichment_celltype=CL:0000055!3.69e-17!180;CL:0000359!3.77e-15!32;CL:0000048!1.60e-13!430;CL:0002139!5.44e-13!24;CL:0000723!8.01e-13!436;CL:0000222!4.59e-12!119;CL:0000034!6.26e-12!444;CL:0002371!2.60e-11!591;CL:0000057!5.40e-11!75;CL:0000192!1.18e-09!42;CL:0000514!1.18e-09!42;CL:1000413!4.72e-09!9;CL:0000071!5.82e-09!18;CL:0002546!5.82e-09!18;CL:0000680!6.17e-09!57;CL:0000056!6.17e-09!57;CL:0000355!6.17e-09!57;CL:0000144!9.22e-09!625;CL:0000115!7.15e-08!35;CL:0000187!1.86e-07!54;CL:0002078!2.86e-07!44;CL:0002539!5.49e-07!10;CL:0000183!7.73e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.83e-15;32!CL:0002595;1.08e-12;5!CL:1000306;1.77e-11;4!CL:0002547;1.77e-11;4!CL:0000134;1.81e-10;55!CL:0000048;3.63e-09;58!CL:0000723;1.15e-08;61!CL:0002539;1.47e-08;10!CL:0000192;1.90e-08;43!CL:0000034;2.09e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.51e-16,32;CL:0000048,4.91e-14,427;CL:0000723,1.30e-13,433;CL:0000034,4.61e-13,441;CL:0002595,2.99e-12,5;CL:1000306,2.79e-11,4;CL:0002547,2.79e-11,4;CL:0000192,4.04e-11,43;CL:0000514,4.04e-11,43;CL:0000680,1.51e-09,58;CL:0000056,1.51e-09,58;CL:0000355,1.51e-09,58;CL:0000187,5.20e-09,55;CL:0002539,1.23e-08,10;CL:0000393,9.78e-08,61;CL:0000211,9.78e-08,61;CL:0000569,8.54e-07,4;CL:0000011,8.54e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;1.90e-08;43 | |||
|ontology_enrichment_disease=DOID:2394!1.30e-13!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.56e-21;14!DOID:120;6.84e-10;27!DOID:193;4.91e-09;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.46e-21,14;DOID:120,6.61e-10,27;DOID:193,4.75e-09,29 | |||
|ontology_enrichment_uberon=UBERON:0000055!5.10e-25!69;UBERON:0001637!7.95e-25!42;UBERON:0003509!7.95e-25!42;UBERON:0004572!7.95e-25!42;UBERON:0001981!7.72e-23!60;UBERON:0007500!7.72e-23!60;UBERON:0004537!7.72e-23!60;UBERON:0006965!7.72e-23!60;UBERON:0004872!2.34e-22!84;UBERON:0002049!1.07e-21!79;UBERON:0007798!1.07e-21!79;UBERON:0004573!1.99e-20!33;UBERON:0004571!1.99e-20!33;UBERON:0004535!9.43e-18!110;UBERON:0001009!1.30e-17!113;UBERON:0000947!5.44e-15!21;UBERON:0010191!5.44e-15!21;UBERON:0003914!3.84e-12!118;UBERON:0003081!2.44e-11!216;UBERON:0002204!1.38e-09!167;UBERON:0000914!3.87e-09!83;UBERON:0002329!3.87e-09!83;UBERON:0003077!3.87e-09!83;UBERON:0003059!3.87e-09!83;UBERON:0007282!3.87e-09!83;UBERON:0009618!3.87e-09!83;UBERON:0007285!3.87e-09!83;UBERON:0003915!4.72e-09!9;UBERON:0004700!4.72e-09!9;UBERON:0001917!4.72e-09!9;UBERON:0001986!5.82e-09!18;UBERON:0004638!5.82e-09!18;UBERON:0004852!5.82e-09!18;UBERON:0006914!1.60e-08!25;UBERON:0004290!4.05e-08!70;UBERON:0000486!5.78e-08!82;UBERON:0000487!6.84e-08!22;UBERON:0001134!8.41e-08!61;UBERON:0002036!8.41e-08!61;UBERON:0003082!8.41e-08!61;UBERON:0002385!2.69e-07!63;UBERON:0001015!2.69e-07!63;UBERON:0000383!2.69e-07!63;UBERON:0004237!5.49e-07!10;UBERON:0004695!5.49e-07!10;UBERON:0002111!5.49e-07!10;UBERON:0004178!5.49e-07!10;UBERON:0000992!5.55e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.66e-21;33!UBERON:0004571;2.66e-21;33!UBERON:0001637;9.12e-21;42!UBERON:0003509;9.12e-21;42!UBERON:0004572;9.12e-21;42!UBERON:0000947;4.73e-15;21!UBERON:0010191;4.73e-15;21!UBERON:0003834;1.08e-12;5!UBERON:0001533;1.08e-12;5!UBERON:0000992;3.26e-12;13!UBERON:0002119;6.94e-12;4!UBERON:0004797;1.77e-11;4!UBERON:0000415;1.77e-11;4!UBERON:0007240;1.77e-11;4!UBERON:0005742;1.77e-11;4!UBERON:0005734;1.77e-11;4!UBERON:0004664;1.77e-11;4!UBERON:0004663;1.77e-11;4!UBERON:0007500;4.53e-11;56!UBERON:0001981;4.53e-11;56!UBERON:0004537;4.53e-11;56!UBERON:0000055;3.16e-10;65!UBERON:0003513;5.89e-09;7!UBERON:0000991;1.06e-08;21!UBERON:0004237;1.47e-08;10!UBERON:0004695;1.47e-08;10!UBERON:0002111;1.47e-08;10!UBERON:0004178;1.47e-08;10!UBERON:0002118;1.51e-08;5!UBERON:0003914;6.26e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,3.32e-26,42;UBERON:0003509,3.32e-26,42;UBERON:0004572,3.32e-26,42;UBERON:0004573,3.91e-23,33;UBERON:0004571,3.91e-23,33;UBERON:0004872,9.93e-20,83;UBERON:0007500,1.47e-18,59;UBERON:0001981,1.47e-18,59;UBERON:0004537,1.47e-18,59;UBERON:0006965,1.47e-18,59;UBERON:0000055,2.53e-18,68;UBERON:0003081,2.06e-16,203;UBERON:0000926,2.01e-15,315;UBERON:0004120,2.01e-15,315;UBERON:0006603,2.01e-15,315;UBERON:0000947,3.71e-15,21;UBERON:0010191,3.71e-15,21;UBERON:0002049,4.47e-15,78;UBERON:0007798,4.47e-15,78;UBERON:0004535,3.23e-14,109;UBERON:0001009,1.28e-13,112;UBERON:0000992,2.79e-12,13;UBERON:0003834,2.99e-12,5;UBERON:0001533,2.99e-12,5;UBERON:0002119,6.64e-12,4;UBERON:0000415,2.79e-11,4;UBERON:0007240,2.79e-11,4;UBERON:0005742,2.79e-11,4;UBERON:0005734,2.79e-11,4;UBERON:0004664,2.79e-11,4;UBERON:0004663,2.79e-11,4;UBERON:0003914,1.03e-10,117;UBERON:0002204,6.41e-10,167;UBERON:0000991,8.77e-09,21;UBERON:0009196,8.77e-09,21;UBERON:0009117,8.77e-09,21;UBERON:0005564,8.77e-09,21;UBERON:0001134,1.18e-08,62;UBERON:0002036,1.18e-08,62;UBERON:0003082,1.18e-08,62;UBERON:0003513,1.19e-08,7;UBERON:0004237,1.23e-08,10;UBERON:0004695,1.23e-08,10;UBERON:0002111,1.23e-08,10;UBERON:0004178,1.23e-08,10;UBERON:0002118,1.27e-08,5;UBERON:0007524,1.39e-08,73;UBERON:0004176,2.66e-08,22;UBERON:0002385,2.97e-08,64;UBERON:0001015,2.97e-08,64;UBERON:0000383,2.97e-08,64;UBERON:0002329,6.02e-08,71;UBERON:0003059,6.02e-08,71;UBERON:0007282,6.02e-08,71;UBERON:0004290,6.02e-08,71;UBERON:0009618,6.02e-08,71;UBERON:0003077,8.94e-08,72;UBERON:0007285,8.94e-08,72;UBERON:0000486,5.41e-07,83;UBERON:0007503,7.58e-07,78 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0.672325146451775,1.20538905604795,2.19093027116212,1.46379839637152,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0.242584061187816,0,1.23350366406548,0.309706370895104,0,0,0.236482229888585,0.344745680736619,4.51839278508678,2.70852973188684,0,0,0,0.918251677112708,1.28371610830437,0.639337125799041,0,0,0,0.580418477257168,0.56738522469114,1.86846674698672,1.25624332628372,1.0429658368404,2.6062661364614,0,1.84138817993782,1.58231193720442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.50401373190767,0.144846518960824,0.795285947051099,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.993812036833525,0.860234595106124,1.73570250803797,0.56530794192401,0.838998872419812,0.550236083880135,2.29894463190492,0.258416759169329,1.77883131343355,1.33888245105868,0,0,0.24406205754817,0.367663080345869,1.62028389576352,0.535798369704479,0,0.450445921933289,0,1.89853131913626,0.916008719652036,0,0,0,0,4.17880688493113,5.42877641334197,4.87622255272983,1.06400514659507,0,2.1349799145941,1.72667283892012,0,0.404132016209064,0.163461903113459,0,0,0,0,1.1409436430889,0,0.117434498643765,0.161872944368132,0.280901613404497,0,0.122834317311768,0.103325781175765,1.18800285728205,0.494533858557114,0,0,0,0,0,2.63386572528503,0.30648779579902,0.901428353439581,0,0.538168907066586,0,0,0.300091096084402,0,0.515281080091258,0.18611685633159,0.168776332241266,0,1.00973509697646,0.0920498986422993,0,0,0,0,1.35282597214308,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.901029173531752,0,0,0,0,6.98067265092,0,0,0,0,0,0,0,0,0,0,0.977208552881205,0,0,0,0,0,0,0,0,1.19812427745791,0,1.42636905040718,0.289562613335158,0.410952645100767,2.14873155887875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.535286966391485,0,0.702848489956279,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0.804269605718038,0,1.07946785661859,1.9531789784444,0.821271560138091,4.15403543346897,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0.340187410553031,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.676695028044854,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0.929691098594572,1.88887408098384,2.7881490806424,2.15623506123262,0,0,0.74129687641568,4.43687148900173,0,0,0.190630193923825,0,0,0,0,0,0,0,0.808729926293264,0,1.68503382495592,0,1.21856744815642,1.05650146756755,0,0,0,1.10273068709225,3.3171948762061,3.5076070820301,0,0,1.42037263873893,2.478587984798,0.563391205064483,0.430234056612155,0.0982490410131212,2.49669736036875,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0,0,0.933118762985422,0.0898683511473268,0,0,0,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46675464364152,1.19228767021794,0.189932387867636,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0.717873024576814,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0,0,0.0788057072991982,0,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0,0,0,0.681552087141687,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.298509605773748,1.16856654923612,1.10961172300523,2.08343305802598,2.76724691927833,5.33886732957922,1.83072054717539,0,4.50767881690063,3.69637874974085,5.89398038505699,4.49803112163605,3.57104800815397,3.31764966272684,3.45594228925393,3.1304703708704,0.150257608997218,2.28483127301277,0.813741466409323,1.63663793282303,2.90008504014719,5.10437135866343,1.19428766609585,1.60011105865261,0,0,0,0,0,0,0,0,0,0,0,0,0.883445729729405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47284760201473,0,0,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,1.41070377476274,0,0.128458450192919,0,0,0.41023272848151,0,0,0.161475645631851,0,0.196295437002051,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96994403068374,7.92484664260167,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,2.60396512716726,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p14@HECW2 | |||
}} |
Revision as of 07:42, 21 January 2014
Short description: | p14@HECW2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_HECW2_5end |
Coexpression cluster: | C4165_schwannoma_CD14_Smooth_Fibroblast_mesenchymal_Mesenchymal_Preadipocyte |
Association with transcript: | 67bp_to_ENST00000462290_5end |
EntrezGene: | HECW2 |
HGNC: | 29853 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.51e-16 | 32 |
multi fate stem cell | 4.91e-14 | 427 |
somatic stem cell | 1.30e-13 | 433 |
stem cell | 4.61e-13 | 441 |
smooth muscle cell of the subclavian artery | 2.99e-12 | 5 |
fibroblast of tunica adventitia of artery | 2.79e-11 | 4 |
fibroblast of the aortic adventitia | 2.79e-11 | 4 |
smooth muscle cell | 4.04e-11 | 43 |
smooth muscle myoblast | 4.04e-11 | 43 |
muscle precursor cell | 1.51e-09 | 58 |
myoblast | 1.51e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.51e-09 | 58 |
muscle cell | 5.20e-09 | 55 |
aortic smooth muscle cell | 1.23e-08 | 10 |
electrically responsive cell | 9.78e-08 | 61 |
electrically active cell | 9.78e-08 | 61 |
cardiac mesenchymal cell | 8.54e-07 | 4 |
migratory trunk neural crest cell | 8.54e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.46e-21 | 14 |
female reproductive organ cancer | 6.61e-10 | 27 |
reproductive organ cancer | 4.75e-09 | 29 |