FFCP PHASE1:Mm9::chr11:105881429..105881481,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=159|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:105881429..105881481,+|id=chr11:105881429..105881481,+|ontology_enrichment_celltype=CL:0000117!7.70e-15!23;CL:0000337!7.70e-15!23;CL:0000540!3.50e-12!33;CL:0000047!3.50e-12!33;CL:0000031!3.50e-12!33;CL:0000404!3.50e-12!33;CL:0000393!1.52e-08!39;CL:0000211!1.52e-08!39;CL:0000221!1.93e-07!44;CL:0000133!1.93e-07!44;CL:0002319!3.46e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,4.40e-17,23;CL:0000337,4.40e-17,23;CL:0000540,2.05e-11,33;CL:0000047,2.05e-11,33;CL:0000031,2.05e-11,33;CL:0000404,2.05e-11,33;CL:0000393,7.90e-09,39;CL:0000211,7.90e-09,39;CL:0002319,1.58e-07,43;CL:0000221,3.05e-07,44;CL:0000133,3.05e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.49e-26!71;UBERON:0003075!1.49e-26!71;UBERON:0007284!1.49e-26!71;UBERON:0001017!1.31e-24!73;UBERON:0005743!1.31e-24!73;UBERON:0001049!6.55e-24!52;UBERON:0005068!6.55e-24!52;UBERON:0006241!6.55e-24!52;UBERON:0007135!6.55e-24!52;UBERON:0000073!7.25e-24!75;UBERON:0001016!7.25e-24!75;UBERON:0004121!1.55e-23!102;UBERON:0000924!1.55e-23!102;UBERON:0006601!1.55e-23!102;UBERON:0000033!2.89e-23!63;UBERON:0000955!6.30e-22!50;UBERON:0006238!6.30e-22!50;UBERON:0002616!2.94e-21!49;UBERON:0003056!4.45e-20!49;UBERON:0003080!3.43e-18!40;UBERON:0002020!1.73e-17!34;UBERON:0002780!1.99e-17!39;UBERON:0001890!1.99e-17!39;UBERON:0006240!1.99e-17!39;UBERON:0002791!2.09e-13!29;UBERON:0003528!2.09e-13!29;UBERON:0001893!2.09e-13!29;UBERON:0007811!1.98e-12!86;UBERON:0000153!1.29e-09!94;UBERON:0000956!7.37e-08!21;UBERON:0001869!7.37e-08!21;UBERON:0000203!7.37e-08!21;UBERON:0002021!2.18e-07!10;UBERON:0000411!2.18e-07!10;UBERON:0001950!2.18e-07!10;UBERON:0002420!2.25e-07!8;UBERON:0007245!2.25e-07!8;UBERON:0010009!2.25e-07!8;UBERON:0010011!2.25e-07!8;UBERON:0000454!2.25e-07!8;UBERON:0002619!2.73e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.52e-29,54;UBERON:0001017,1.02e-27,73;UBERON:0001016,1.25e-26,75;UBERON:0001049,1.46e-26,52;UBERON:0005068,1.46e-26,52;UBERON:0006241,1.46e-26,52;UBERON:0007135,1.46e-26,52;UBERON:0002346,1.76e-23,64;UBERON:0003075,1.76e-23,64;UBERON:0007284,1.76e-23,64;UBERON:0002020,1.01e-21,34;UBERON:0004121,1.40e-21,95;UBERON:0000924,1.40e-21,95;UBERON:0006601,1.40e-21,95;UBERON:0010371,2.56e-20,73;UBERON:0000955,6.06e-20,47;UBERON:0006238,6.06e-20,47;UBERON:0002616,5.88e-19,46;UBERON:0003080,1.17e-17,40;UBERON:0003056,1.43e-16,49;UBERON:0002780,1.57e-16,39;UBERON:0001890,1.57e-16,39;UBERON:0006240,1.57e-16,39;UBERON:0010314,1.38e-15,92;UBERON:0003528,3.45e-15,29;UBERON:0002791,3.45e-15,29;UBERON:0001893,3.45e-15,29;UBERON:0002021,6.21e-12,10;UBERON:0000411,6.21e-12,10;UBERON:0001950,6.21e-12,10;UBERON:0002420,6.55e-12,8;UBERON:0007245,6.55e-12,8;UBERON:0010009,6.55e-12,8;UBERON:0010011,6.55e-12,8;UBERON:0000454,6.55e-12,8;UBERON:0002240,3.39e-10,6;UBERON:0005174,3.39e-10,6;UBERON:0001137,3.39e-10,6;UBERON:0003076,1.15e-09,12;UBERON:0003057,1.15e-09,12;UBERON:0001948,7.16e-09,5;UBERON:0002315,7.16e-09,5;UBERON:0000369,9.48e-08,5;UBERON:0002435,9.48e-08,5;UBERON:0000204,9.48e-08,5;UBERON:0010082,9.48e-08,5;UBERON:0002619,1.76e-07,17;UBERON:0002950,4.74e-07,4;UBERON:0001891,4.74e-07,4;UBERON:0009616,4.74e-07,4;UBERON:0010286,4.74e-07,4;UBERON:0000956,8.00e-07,21;UBERON:0001869,8.00e-07,21;UBERON:0000203,8.00e-07,21|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0.34243593645101,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0.430942465371778,0.380046838912748,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.09265843438391,10.0508286061686,5.70448263155561,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0.210324961351382,9.42648248532552,9.27647871996777,0.61245399607477,0.862609239164127,0.919218786610021,15.4162233399144,6.12899222808901,7.83393319606842,6.98997324970027,6.31264740856627,6.77187381723788,6.97957497503452,10.1297269805702,9.16789486660861,16.7938293719991,10.6778760599327,8.38797506213853,0.075726193333184,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0.704217098883403,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,1.04091196059682,1.21786191324856,0,0.60289056221049,0.352766121407114,0.125666591329675,0.494389935468748,0,0,0,0,0,0,1.46390398505774,0.628340120440365,0,0,0,0,7.18995069143149,7.32000964509802,2.89005009859588,4.69325664519146,4.09144731728529,7.06479351502504,5.51620294430376,0,0,0,0,0.390361328888111,0.689706313300419,0.360124259610698,0.90422890701429,1.2246569847239,1.40925092313335,0.749613796477831,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78521907415429,0.92614151141356,0,0,1.91959425481711,1.16118335930219,0.902072229254653,0.403367049246685,0.22237804384487,0,0,0.329397909448022,0,0.397912944082302,0,0.898819408654221,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.34863067936518,6.91548950893999,0,0,0.94652465824877,0,0.215423397732799,0.238968797952552,0.222798674082394,0.566153061577665,0,0,0,2.24924921495265,0,0.178065603667255,0,0,0,0,0.302323556964751,0,0,0,0.516856586336442,0,0,0,0,0,0.340439605753788,0.540183282093931,0.776152102696527,0.428674070063185,1.24138163549592,0.891844088010353,1.15184314421485,1.522324745573,0.469343416127421,0.847328283455281,0,0,0,0.0603129249281559,0,0,0.291480836629851,7.23158677840988,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0,0,0.5208175393758,0.943734099831398,0.483168241652012,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0.167884616364078,0,0,0,0,0,4.51801474093653,1.38097570952153,1.71868654031819,2.23409137046794,1.37016503954128,1.5107877947794,6.07520250208625,4.5032120322422,1.81256963593682,4.65984280576638,0.207574695168353,0.399024873401031,1.02440163452481,0.729320151204882,0.838452650511929,1.2869045591501,0.888986911206461,1.23621034343337,1.92551525755089,0.505394423527595,1.2673964994512,1.50901073108861,1.03005658216871,1.08842759088278,1.14870937911227,0,1.15884325944855,0.38581844092741,0.824171801606613,0.441596760403192,1.02860775715625,0.70990322463735,0.953744759789284,2.76158191601424,0.564656282491984,1.01537529470012,0.365855945745545,0.526139422875686,1.49384525230448,0.561142271657738,0.711810108745045,0.492522411877817,0.818462086339379,1.23949472948773,1.15743966588685,1.49886346762768,1.16965804222704,1.50409737833809,0.956441660344217,0.220591419119515,0.695603506861264|short_description=p@chr11:105881429..105881481,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=159 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:105881429..105881481,+ | |||
|description=CAGE_peak_at_chr11:105881429..105881481,+ | |||
|id=chr11:105881429..105881481,+ | |||
|ontology_enrichment_celltype=CL:0000117!7.70e-15!23;CL:0000337!7.70e-15!23;CL:0000540!3.50e-12!33;CL:0000047!3.50e-12!33;CL:0000031!3.50e-12!33;CL:0000404!3.50e-12!33;CL:0000393!1.52e-08!39;CL:0000211!1.52e-08!39;CL:0000221!1.93e-07!44;CL:0000133!1.93e-07!44;CL:0002319!3.46e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.40e-17,23;CL:0000337,4.40e-17,23;CL:0000540,2.05e-11,33;CL:0000047,2.05e-11,33;CL:0000031,2.05e-11,33;CL:0000404,2.05e-11,33;CL:0000393,7.90e-09,39;CL:0000211,7.90e-09,39;CL:0002319,1.58e-07,43;CL:0000221,3.05e-07,44;CL:0000133,3.05e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.49e-26!71;UBERON:0003075!1.49e-26!71;UBERON:0007284!1.49e-26!71;UBERON:0001017!1.31e-24!73;UBERON:0005743!1.31e-24!73;UBERON:0001049!6.55e-24!52;UBERON:0005068!6.55e-24!52;UBERON:0006241!6.55e-24!52;UBERON:0007135!6.55e-24!52;UBERON:0000073!7.25e-24!75;UBERON:0001016!7.25e-24!75;UBERON:0004121!1.55e-23!102;UBERON:0000924!1.55e-23!102;UBERON:0006601!1.55e-23!102;UBERON:0000033!2.89e-23!63;UBERON:0000955!6.30e-22!50;UBERON:0006238!6.30e-22!50;UBERON:0002616!2.94e-21!49;UBERON:0003056!4.45e-20!49;UBERON:0003080!3.43e-18!40;UBERON:0002020!1.73e-17!34;UBERON:0002780!1.99e-17!39;UBERON:0001890!1.99e-17!39;UBERON:0006240!1.99e-17!39;UBERON:0002791!2.09e-13!29;UBERON:0003528!2.09e-13!29;UBERON:0001893!2.09e-13!29;UBERON:0007811!1.98e-12!86;UBERON:0000153!1.29e-09!94;UBERON:0000956!7.37e-08!21;UBERON:0001869!7.37e-08!21;UBERON:0000203!7.37e-08!21;UBERON:0002021!2.18e-07!10;UBERON:0000411!2.18e-07!10;UBERON:0001950!2.18e-07!10;UBERON:0002420!2.25e-07!8;UBERON:0007245!2.25e-07!8;UBERON:0010009!2.25e-07!8;UBERON:0010011!2.25e-07!8;UBERON:0000454!2.25e-07!8;UBERON:0002619!2.73e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.52e-29,54;UBERON:0001017,1.02e-27,73;UBERON:0001016,1.25e-26,75;UBERON:0001049,1.46e-26,52;UBERON:0005068,1.46e-26,52;UBERON:0006241,1.46e-26,52;UBERON:0007135,1.46e-26,52;UBERON:0002346,1.76e-23,64;UBERON:0003075,1.76e-23,64;UBERON:0007284,1.76e-23,64;UBERON:0002020,1.01e-21,34;UBERON:0004121,1.40e-21,95;UBERON:0000924,1.40e-21,95;UBERON:0006601,1.40e-21,95;UBERON:0010371,2.56e-20,73;UBERON:0000955,6.06e-20,47;UBERON:0006238,6.06e-20,47;UBERON:0002616,5.88e-19,46;UBERON:0003080,1.17e-17,40;UBERON:0003056,1.43e-16,49;UBERON:0002780,1.57e-16,39;UBERON:0001890,1.57e-16,39;UBERON:0006240,1.57e-16,39;UBERON:0010314,1.38e-15,92;UBERON:0003528,3.45e-15,29;UBERON:0002791,3.45e-15,29;UBERON:0001893,3.45e-15,29;UBERON:0002021,6.21e-12,10;UBERON:0000411,6.21e-12,10;UBERON:0001950,6.21e-12,10;UBERON:0002420,6.55e-12,8;UBERON:0007245,6.55e-12,8;UBERON:0010009,6.55e-12,8;UBERON:0010011,6.55e-12,8;UBERON:0000454,6.55e-12,8;UBERON:0002240,3.39e-10,6;UBERON:0005174,3.39e-10,6;UBERON:0001137,3.39e-10,6;UBERON:0003076,1.15e-09,12;UBERON:0003057,1.15e-09,12;UBERON:0001948,7.16e-09,5;UBERON:0002315,7.16e-09,5;UBERON:0000369,9.48e-08,5;UBERON:0002435,9.48e-08,5;UBERON:0000204,9.48e-08,5;UBERON:0010082,9.48e-08,5;UBERON:0002619,1.76e-07,17;UBERON:0002950,4.74e-07,4;UBERON:0001891,4.74e-07,4;UBERON:0009616,4.74e-07,4;UBERON:0010286,4.74e-07,4;UBERON:0000956,8.00e-07,21;UBERON:0001869,8.00e-07,21;UBERON:0000203,8.00e-07,21 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0.34243593645101,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0.430942465371778,0.380046838912748,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.09265843438391,10.0508286061686,5.70448263155561,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0.210324961351382,9.42648248532552,9.27647871996777,0.61245399607477,0.862609239164127,0.919218786610021,15.4162233399144,6.12899222808901,7.83393319606842,6.98997324970027,6.31264740856627,6.77187381723788,6.97957497503452,10.1297269805702,9.16789486660861,16.7938293719991,10.6778760599327,8.38797506213853,0.075726193333184,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0.704217098883403,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,1.04091196059682,1.21786191324856,0,0.60289056221049,0.352766121407114,0.125666591329675,0.494389935468748,0,0,0,0,0,0,1.46390398505774,0.628340120440365,0,0,0,0,7.18995069143149,7.32000964509802,2.89005009859588,4.69325664519146,4.09144731728529,7.06479351502504,5.51620294430376,0,0,0,0,0.390361328888111,0.689706313300419,0.360124259610698,0.90422890701429,1.2246569847239,1.40925092313335,0.749613796477831,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78521907415429,0.92614151141356,0,0,1.91959425481711,1.16118335930219,0.902072229254653,0.403367049246685,0.22237804384487,0,0,0.329397909448022,0,0.397912944082302,0,0.898819408654221,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.34863067936518,6.91548950893999,0,0,0.94652465824877,0,0.215423397732799,0.238968797952552,0.222798674082394,0.566153061577665,0,0,0,2.24924921495265,0,0.178065603667255,0,0,0,0,0.302323556964751,0,0,0,0.516856586336442,0,0,0,0,0,0.340439605753788,0.540183282093931,0.776152102696527,0.428674070063185,1.24138163549592,0.891844088010353,1.15184314421485,1.522324745573,0.469343416127421,0.847328283455281,0,0,0,0.0603129249281559,0,0,0.291480836629851,7.23158677840988,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0,0,0.5208175393758,0.943734099831398,0.483168241652012,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0.167884616364078,0,0,0,0,0,4.51801474093653,1.38097570952153,1.71868654031819,2.23409137046794,1.37016503954128,1.5107877947794,6.07520250208625,4.5032120322422,1.81256963593682,4.65984280576638,0.207574695168353,0.399024873401031,1.02440163452481,0.729320151204882,0.838452650511929,1.2869045591501,0.888986911206461,1.23621034343337,1.92551525755089,0.505394423527595,1.2673964994512,1.50901073108861,1.03005658216871,1.08842759088278,1.14870937911227,0,1.15884325944855,0.38581844092741,0.824171801606613,0.441596760403192,1.02860775715625,0.70990322463735,0.953744759789284,2.76158191601424,0.564656282491984,1.01537529470012,0.365855945745545,0.526139422875686,1.49384525230448,0.561142271657738,0.711810108745045,0.492522411877817,0.818462086339379,1.23949472948773,1.15743966588685,1.49886346762768,1.16965804222704,1.50409737833809,0.956441660344217,0.220591419119515,0.695603506861264 | |||
|short_description=p@chr11:105881429..105881481,+ | |||
}} |
Latest revision as of 07:17, 5 August 2015
Short description: | p@chr11:105881429..105881481, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:105881429..105881481, + |
Coexpression cluster: | MCL_coexpression_mm9:159 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.40e-17 | 23 |
neuroblast (sensu Vertebrata) | 4.40e-17 | 23 |
neuron | 2.05e-11 | 33 |
neuronal stem cell | 2.05e-11 | 33 |
neuroblast | 2.05e-11 | 33 |
electrically signaling cell | 2.05e-11 | 33 |
electrically responsive cell | 7.90e-09 | 39 |
electrically active cell | 7.90e-09 | 39 |
neural cell | 1.58e-07 | 43 |
ectodermal cell | 3.05e-07 | 44 |
neurectodermal cell | 3.05e-07 | 44 |