FFCP PHASE1:Mm9::chr18:31476569..31476580,-: Difference between revisions
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{{FFCP|EntrezGene=19762|HGNC=|MCL_coexpression_id=20|UniProt=|association_with_transcript=201bp_to_uc012bas.1_5end|description=CAGE_peak_6_at_Rit2_5end|id=chr18:31476569..31476580,-|ontology_enrichment_celltype=CL:0000117!6.59e-15!23;CL:0000337!6.59e-15!23;CL:0000540!3.32e-11!33;CL:0000047!3.32e-11!33;CL:0000031!3.32e-11!33;CL:0000404!3.32e-11!33;CL:0000393!1.30e-08!39;CL:0000211!1.30e-08!39;CL:0002319!3.47e-08!43;CL:0000221!7.14e-08!44;CL:0000133!7.14e-08!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.68e-23,23;CL:0000337,1.68e-23,23;CL:0000540,1.26e-15,33;CL:0000047,1.26e-15,33;CL:0000031,1.26e-15,33;CL:0000404,1.26e-15,33;CL:0000393,7.76e-13,39;CL:0000211,7.76e-13,39;CL:0002614,5.96e-12,3;CL:0002610,1.72e-11,3;CL:0002319,2.07e-11,43;CL:0000221,4.28e-11,44;CL:0000133,4.28e-11,44;CL:0002612,9.81e-11,3;CL:0002611,5.98e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!8.87e-25!75;UBERON:0001016!8.87e-25!75;UBERON:0001017!1.81e-24!73;UBERON:0005743!1.81e-24!73;UBERON:0002346!8.01e-24!71;UBERON:0003075!8.01e-24!71;UBERON:0007284!8.01e-24!71;UBERON:0004121!4.68e-23!102;UBERON:0000924!4.68e-23!102;UBERON:0006601!4.68e-23!102;UBERON:0001049!6.39e-22!52;UBERON:0005068!6.39e-22!52;UBERON:0006241!6.39e-22!52;UBERON:0007135!6.39e-22!52;UBERON:0000033!7.75e-21!63;UBERON:0000955!1.13e-19!50;UBERON:0006238!1.13e-19!50;UBERON:0002616!1.11e-18!49;UBERON:0002020!2.27e-16!34;UBERON:0003056!1.46e-15!49;UBERON:0003080!1.83e-12!40;UBERON:0007811!2.87e-12!86;UBERON:0002780!1.90e-11!39;UBERON:0001890!1.90e-11!39;UBERON:0006240!1.90e-11!39;UBERON:0003076!2.22e-11!12;UBERON:0003057!2.22e-11!12;UBERON:0002791!4.21e-11!29;UBERON:0003528!4.21e-11!29;UBERON:0001893!4.21e-11!29;UBERON:0002420!9.71e-11!8;UBERON:0007245!9.71e-11!8;UBERON:0010009!9.71e-11!8;UBERON:0010011!9.71e-11!8;UBERON:0000454!9.71e-11!8;UBERON:0000153!2.55e-10!94;UBERON:0002298!8.23e-10!6;UBERON:0002240!3.63e-09!6;UBERON:0005174!3.63e-09!6;UBERON:0001137!3.63e-09!6;UBERON:0001948!8.75e-08!5;UBERON:0002315!8.75e-08!5;UBERON:0002021!1.11e-07!10;UBERON:0000411!1.11e-07!10;UBERON:0001950!1.11e-07!10;UBERON:0002950!3.96e-07!4;UBERON:0001891!3.96e-07!4;UBERON:0009616!3.96e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0003076,2.28e-27,12;UBERON:0003057,2.28e-27,12;UBERON:0000073,5.54e-25,54;UBERON:0001017,1.02e-23,73;UBERON:0001016,5.64e-23,75;UBERON:0001049,7.20e-21,52;UBERON:0005068,7.20e-21,52;UBERON:0006241,7.20e-21,52;UBERON:0007135,7.20e-21,52;UBERON:0002240,1.78e-20,6;UBERON:0005174,1.78e-20,6;UBERON:0001137,1.78e-20,6;UBERON:0004121,5.52e-19,95;UBERON:0000924,5.52e-19,95;UBERON:0006601,5.52e-19,95;UBERON:0002346,3.24e-18,64;UBERON:0003075,3.24e-18,64;UBERON:0007284,3.24e-18,64;UBERON:0001948,4.84e-17,5;UBERON:0002315,4.84e-17,5;UBERON:0010371,1.68e-15,73;UBERON:0002950,2.04e-15,4;UBERON:0001891,2.04e-15,4;UBERON:0009616,2.04e-15,4;UBERON:0010286,2.04e-15,4;UBERON:0002038,5.96e-12,3;UBERON:0009663,5.96e-12,3;UBERON:0009661,5.96e-12,3;UBERON:0000125,5.96e-12,3;UBERON:0002308,5.96e-12,3;UBERON:0010314,1.66e-11,92;UBERON:0004684,1.72e-11,3;UBERON:0002275,1.72e-11,3;UBERON:0002257,9.81e-11,3;UBERON:0002616,1.63e-10,46;UBERON:0002020,1.96e-10,34;UBERON:0000955,3.09e-10,47;UBERON:0006238,3.09e-10,47;UBERON:0004733,1.68e-09,6;UBERON:0004732,1.68e-09,6;UBERON:0002028,1.68e-09,6;UBERON:0007277,1.68e-09,6;UBERON:0001896,2.67e-08,2;UBERON:0002298,2.67e-08,2;UBERON:0005290,2.67e-08,2;UBERON:0010096,2.67e-08,2;UBERON:0002256,5.98e-08,2;UBERON:0002420,1.26e-07,8;UBERON:0007245,1.26e-07,8;UBERON:0010009,1.26e-07,8;UBERON:0010011,1.26e-07,8;UBERON:0000454,1.26e-07,8;UBERON:0000025,1.64e-07,114;UBERON:0004111,8.93e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0,0,0,3.71346279724945,1.32521124570968,0,0,0,2.20231761998777,2.42605942361857,4.6081959976873,0.395658863190582,0.548925861614458,0.52091337055676,5.862842979029,3.37657566019008,3.81995619442025,1.76777151284201,2.98980529678116,1.1183966749518,0,0.302286240427142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0.23517741427141,0,0,0,0,0,0,0,0,1.17112318804619,1.8850203613211,0,0,0,0,3.89455662452539,2.74500361691176,0.502617408451458,0.347648640384553,1.02286182932132,2.70124457927428,2.10913641988085,0,0,0,0.420883711772948,0,0,0,0.150704817835715,0.340182495756639,0.384341160854549,0.281105173679186,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65596710964597,2.10981035865966,0,0,0,0.390438744296638,0,0,0,0,0,0,0.395287777946524,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,1.14579102687879,0.68741272937475,0.685082519770642,0.755393897389701,0.675022500231806,0,0,1.03552062350364,0,0,0.170733605754134,0.243106717068294,0,0.367687016900028,0.222246727801615,0,0.320919209591815,0.252697211763798,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.294397840268795,0.342869252385415,0.532427418478012,0.238436189947321,0.145346416632329,0.188218760830661,0,0,0.263069711437843,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0,0|short_description=p6@Rit2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19762 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=201bp_to_uc012bas.1_5end | |||
|cluster_id=chr18:31476569..31476580,- | |||
|description=CAGE_peak_6_at_Rit2_5end | |||
|id=chr18:31476569..31476580,- | |||
|ontology_enrichment_celltype=CL:0000117!6.59e-15!23;CL:0000337!6.59e-15!23;CL:0000540!3.32e-11!33;CL:0000047!3.32e-11!33;CL:0000031!3.32e-11!33;CL:0000404!3.32e-11!33;CL:0000393!1.30e-08!39;CL:0000211!1.30e-08!39;CL:0002319!3.47e-08!43;CL:0000221!7.14e-08!44;CL:0000133!7.14e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.68e-23,23;CL:0000337,1.68e-23,23;CL:0000540,1.26e-15,33;CL:0000047,1.26e-15,33;CL:0000031,1.26e-15,33;CL:0000404,1.26e-15,33;CL:0000393,7.76e-13,39;CL:0000211,7.76e-13,39;CL:0002614,5.96e-12,3;CL:0002610,1.72e-11,3;CL:0002319,2.07e-11,43;CL:0000221,4.28e-11,44;CL:0000133,4.28e-11,44;CL:0002612,9.81e-11,3;CL:0002611,5.98e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.87e-25!75;UBERON:0001016!8.87e-25!75;UBERON:0001017!1.81e-24!73;UBERON:0005743!1.81e-24!73;UBERON:0002346!8.01e-24!71;UBERON:0003075!8.01e-24!71;UBERON:0007284!8.01e-24!71;UBERON:0004121!4.68e-23!102;UBERON:0000924!4.68e-23!102;UBERON:0006601!4.68e-23!102;UBERON:0001049!6.39e-22!52;UBERON:0005068!6.39e-22!52;UBERON:0006241!6.39e-22!52;UBERON:0007135!6.39e-22!52;UBERON:0000033!7.75e-21!63;UBERON:0000955!1.13e-19!50;UBERON:0006238!1.13e-19!50;UBERON:0002616!1.11e-18!49;UBERON:0002020!2.27e-16!34;UBERON:0003056!1.46e-15!49;UBERON:0003080!1.83e-12!40;UBERON:0007811!2.87e-12!86;UBERON:0002780!1.90e-11!39;UBERON:0001890!1.90e-11!39;UBERON:0006240!1.90e-11!39;UBERON:0003076!2.22e-11!12;UBERON:0003057!2.22e-11!12;UBERON:0002791!4.21e-11!29;UBERON:0003528!4.21e-11!29;UBERON:0001893!4.21e-11!29;UBERON:0002420!9.71e-11!8;UBERON:0007245!9.71e-11!8;UBERON:0010009!9.71e-11!8;UBERON:0010011!9.71e-11!8;UBERON:0000454!9.71e-11!8;UBERON:0000153!2.55e-10!94;UBERON:0002298!8.23e-10!6;UBERON:0002240!3.63e-09!6;UBERON:0005174!3.63e-09!6;UBERON:0001137!3.63e-09!6;UBERON:0001948!8.75e-08!5;UBERON:0002315!8.75e-08!5;UBERON:0002021!1.11e-07!10;UBERON:0000411!1.11e-07!10;UBERON:0001950!1.11e-07!10;UBERON:0002950!3.96e-07!4;UBERON:0001891!3.96e-07!4;UBERON:0009616!3.96e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,2.28e-27,12;UBERON:0003057,2.28e-27,12;UBERON:0000073,5.54e-25,54;UBERON:0001017,1.02e-23,73;UBERON:0001016,5.64e-23,75;UBERON:0001049,7.20e-21,52;UBERON:0005068,7.20e-21,52;UBERON:0006241,7.20e-21,52;UBERON:0007135,7.20e-21,52;UBERON:0002240,1.78e-20,6;UBERON:0005174,1.78e-20,6;UBERON:0001137,1.78e-20,6;UBERON:0004121,5.52e-19,95;UBERON:0000924,5.52e-19,95;UBERON:0006601,5.52e-19,95;UBERON:0002346,3.24e-18,64;UBERON:0003075,3.24e-18,64;UBERON:0007284,3.24e-18,64;UBERON:0001948,4.84e-17,5;UBERON:0002315,4.84e-17,5;UBERON:0010371,1.68e-15,73;UBERON:0002950,2.04e-15,4;UBERON:0001891,2.04e-15,4;UBERON:0009616,2.04e-15,4;UBERON:0010286,2.04e-15,4;UBERON:0002038,5.96e-12,3;UBERON:0009663,5.96e-12,3;UBERON:0009661,5.96e-12,3;UBERON:0000125,5.96e-12,3;UBERON:0002308,5.96e-12,3;UBERON:0010314,1.66e-11,92;UBERON:0004684,1.72e-11,3;UBERON:0002275,1.72e-11,3;UBERON:0002257,9.81e-11,3;UBERON:0002616,1.63e-10,46;UBERON:0002020,1.96e-10,34;UBERON:0000955,3.09e-10,47;UBERON:0006238,3.09e-10,47;UBERON:0004733,1.68e-09,6;UBERON:0004732,1.68e-09,6;UBERON:0002028,1.68e-09,6;UBERON:0007277,1.68e-09,6;UBERON:0001896,2.67e-08,2;UBERON:0002298,2.67e-08,2;UBERON:0005290,2.67e-08,2;UBERON:0010096,2.67e-08,2;UBERON:0002256,5.98e-08,2;UBERON:0002420,1.26e-07,8;UBERON:0007245,1.26e-07,8;UBERON:0010009,1.26e-07,8;UBERON:0010011,1.26e-07,8;UBERON:0000454,1.26e-07,8;UBERON:0000025,1.64e-07,114;UBERON:0004111,8.93e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0,0,0,3.71346279724945,1.32521124570968,0,0,0,2.20231761998777,2.42605942361857,4.6081959976873,0.395658863190582,0.548925861614458,0.52091337055676,5.862842979029,3.37657566019008,3.81995619442025,1.76777151284201,2.98980529678116,1.1183966749518,0,0.302286240427142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0.23517741427141,0,0,0,0,0,0,0,0,1.17112318804619,1.8850203613211,0,0,0,0,3.89455662452539,2.74500361691176,0.502617408451458,0.347648640384553,1.02286182932132,2.70124457927428,2.10913641988085,0,0,0,0.420883711772948,0,0,0,0.150704817835715,0.340182495756639,0.384341160854549,0.281105173679186,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65596710964597,2.10981035865966,0,0,0,0.390438744296638,0,0,0,0,0,0,0.395287777946524,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,1.14579102687879,0.68741272937475,0.685082519770642,0.755393897389701,0.675022500231806,0,0,1.03552062350364,0,0,0.170733605754134,0.243106717068294,0,0.367687016900028,0.222246727801615,0,0.320919209591815,0.252697211763798,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.294397840268795,0.342869252385415,0.532427418478012,0.238436189947321,0.145346416632329,0.188218760830661,0,0,0.263069711437843,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p6@Rit2 | |||
}} |
Revision as of 15:02, 5 August 2015
Short description: | p6@Rit2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Rit2_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 201bp_to_uc012bas.1_5end |
EntrezGene: | 19762 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.68e-23 | 23 |
neuroblast (sensu Vertebrata) | 1.68e-23 | 23 |
neuron | 1.26e-15 | 33 |
neuronal stem cell | 1.26e-15 | 33 |
neuroblast | 1.26e-15 | 33 |
electrically signaling cell | 1.26e-15 | 33 |
electrically responsive cell | 7.76e-13 | 39 |
electrically active cell | 7.76e-13 | 39 |
neuron of the substantia nigra | 5.96e-12 | 3 |
raphe nuclei neuron | 1.72e-11 | 3 |
neural cell | 2.07e-11 | 43 |
ectodermal cell | 4.28e-11 | 44 |
neurectodermal cell | 4.28e-11 | 44 |
neuron of the ventral spinal cord | 9.81e-11 | 3 |
neuron of the dorsal spinal cord | 5.98e-08 | 2 |