FFCP PHASE1:Mm9::chr18:37105735..37105750,+: Difference between revisions
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{{FFCP|EntrezGene=192163|HGNC=|MCL_coexpression_id=13|UniProt=F7CJQ5|association_with_transcript=-50bp_to_ENSMUST00000166050_5end|description=CAGE_peak_1_at_Pcdha3_5end|id=chr18:37105735..37105750,+|ontology_enrichment_celltype=CL:0000540!2.98e-18!33;CL:0000047!2.98e-18!33;CL:0000031!2.98e-18!33;CL:0000404!2.98e-18!33;CL:0000117!1.63e-15!23;CL:0000337!1.63e-15!23;CL:0000393!1.12e-13!39;CL:0000211!1.12e-13!39;CL:0000221!1.43e-13!44;CL:0000133!1.43e-13!44;CL:0002319!3.87e-13!43;CL:0000055!9.49e-10!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.06e-22,23;CL:0000337,1.06e-22,23;CL:0000540,1.28e-14,33;CL:0000047,1.28e-14,33;CL:0000031,1.28e-14,33;CL:0000404,1.28e-14,33;CL:0000393,8.99e-12,39;CL:0000211,8.99e-12,39;CL:0002319,2.53e-10,43;CL:0000221,5.30e-10,44;CL:0000133,5.30e-10,44;CL:0002612,1.10e-08,3;CL:0002613,6.96e-08,3;CL:0000120,7.33e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.18e-28!75;UBERON:0001016!2.18e-28!75;UBERON:0001017!1.45e-27!73;UBERON:0005743!1.45e-27!73;UBERON:0004121!7.11e-25!102;UBERON:0000924!7.11e-25!102;UBERON:0006601!7.11e-25!102;UBERON:0002346!3.24e-24!71;UBERON:0003075!3.24e-24!71;UBERON:0007284!3.24e-24!71;UBERON:0001049!2.82e-22!52;UBERON:0005068!2.82e-22!52;UBERON:0006241!2.82e-22!52;UBERON:0007135!2.82e-22!52;UBERON:0000033!7.66e-22!63;UBERON:0002020!5.18e-21!34;UBERON:0003056!3.29e-19!49;UBERON:0000955!9.10e-19!50;UBERON:0006238!9.10e-19!50;UBERON:0002616!5.05e-18!49;UBERON:0002791!3.01e-16!29;UBERON:0003528!3.01e-16!29;UBERON:0001893!3.01e-16!29;UBERON:0003080!4.55e-16!40;UBERON:0002780!7.19e-16!39;UBERON:0001890!7.19e-16!39;UBERON:0006240!7.19e-16!39;UBERON:0007811!5.55e-12!86;UBERON:0000956!5.75e-12!21;UBERON:0001869!5.75e-12!21;UBERON:0000203!5.75e-12!21;UBERON:0002021!3.91e-10!10;UBERON:0000411!3.91e-10!10;UBERON:0001950!3.91e-10!10;UBERON:0000153!1.33e-09!94;UBERON:0002619!2.05e-09!17;UBERON:0003076!6.41e-07!12;UBERON:0003057!6.41e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.57e-35,34;UBERON:0000073,8.80e-28,54;UBERON:0001017,4.88e-26,73;UBERON:0001016,3.81e-25,75;UBERON:0001049,8.29e-25,52;UBERON:0005068,8.29e-25,52;UBERON:0006241,8.29e-25,52;UBERON:0007135,8.29e-25,52;UBERON:0003528,9.28e-25,29;UBERON:0002791,9.28e-25,29;UBERON:0001893,9.28e-25,29;UBERON:0002346,4.79e-24,64;UBERON:0003075,4.79e-24,64;UBERON:0007284,4.79e-24,64;UBERON:0004121,1.45e-22,95;UBERON:0000924,1.45e-22,95;UBERON:0006601,1.45e-22,95;UBERON:0002021,7.12e-22,10;UBERON:0000411,7.12e-22,10;UBERON:0001950,7.12e-22,10;UBERON:0002780,2.75e-21,39;UBERON:0001890,2.75e-21,39;UBERON:0006240,2.75e-21,39;UBERON:0003056,4.05e-21,49;UBERON:0003080,1.27e-20,40;UBERON:0010371,3.14e-20,73;UBERON:0000955,1.42e-18,47;UBERON:0006238,1.42e-18,47;UBERON:0000956,1.70e-18,21;UBERON:0001869,1.70e-18,21;UBERON:0000203,1.70e-18,21;UBERON:0002619,1.39e-17,17;UBERON:0002616,2.97e-17,46;UBERON:0010314,1.25e-14,92;UBERON:0001948,1.00e-12,5;UBERON:0002315,1.00e-12,5;UBERON:0002240,1.60e-10,6;UBERON:0005174,1.60e-10,6;UBERON:0001137,1.60e-10,6;UBERON:0002257,1.10e-08,3;UBERON:0000369,3.92e-08,5;UBERON:0002435,3.92e-08,5;UBERON:0000204,3.92e-08,5;UBERON:0010082,3.92e-08,5;UBERON:0000025,6.59e-08,114;UBERON:0002420,2.36e-07,8;UBERON:0007245,2.36e-07,8;UBERON:0010009,2.36e-07,8;UBERON:0010011,2.36e-07,8;UBERON:0000454,2.36e-07,8;UBERON:0004111,5.38e-07,122|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,4.23192783417626,3.80298842103708,0,0,0,0,0,0,0,0.933206510776299,1.21505344498522,0.630974884054146,3.99911378165325,2.20868540951614,2.20483438586917,0.862609239164127,0,0,1.65993539510744,1.0752457327937,2.90149833006426,2.56165402086747,4.68822033501084,0.279182999001381,0.56276261003168,1.68078072554491,7.07108605136802,6.69146899755784,5.96478226640962,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0.301445281105245,0.117588707135705,0,0,0,0,0,0,0,0,0.878342391034642,0.83778682725382,0,0,0,0,0.149790639404823,0,5.40313714085317,1.21677024134594,2.81287003063364,1.24672826735736,1.62241263067758,0.203678727700633,0,0,0.210441855886474,0.130120442962704,0,0.180062129805349,1.05493372485001,0.476255494059295,1.2811372028485,1.03071897015702,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,0.210289948564127,5.04232600658494,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.820481806145422,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0.238968797952552,0,0.566153061577665,0.404810701674894,0.584511715822624,0.395287777946524,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0.608929898229199,0,0,0.220528398054962,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51801474093653,5.06357760157895,2.29158205375759,3.26521046453006,2.74033007908257,3.0215755895588,1.35004500046361,2.70192721934532,2.71885445390523,1.55328093525546,0.103787347584177,0,0.341467211508268,0,0.209613162627982,0.183843508450014,0.222246727801615,0.824140228955577,0,0.252697211763798,1.01391719956096,0.754505365544305,0.561849044819294,0.832326981263301,1.03383844120104,1.42888107384922,1.0429589335037,0.77163688185482,1.23625770240992,0.441596760403192,0.685738504770831,0.887379030796687,0.476872379894642,0.581385666529314,0.752875043322645,0.761531471025089,0.73171189149109,0.263069711437843,0.407412341537585,0,0.474540072496697,0.591026894253381,0,0.154936841185966,0.771626443924566,0.749431733813838,0.233931608445408,0.429742108096597,0.382576664137687,0,0|short_description=p1@Pcdha3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:192163 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F7CJQ5 | |||
|association_with_transcript=-50bp_to_ENSMUST00000166050_5end | |||
|cluster_id=chr18:37105735..37105750,+ | |||
|description=CAGE_peak_1_at_Pcdha3_5end | |||
|id=chr18:37105735..37105750,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.98e-18!33;CL:0000047!2.98e-18!33;CL:0000031!2.98e-18!33;CL:0000404!2.98e-18!33;CL:0000117!1.63e-15!23;CL:0000337!1.63e-15!23;CL:0000393!1.12e-13!39;CL:0000211!1.12e-13!39;CL:0000221!1.43e-13!44;CL:0000133!1.43e-13!44;CL:0002319!3.87e-13!43;CL:0000055!9.49e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.06e-22,23;CL:0000337,1.06e-22,23;CL:0000540,1.28e-14,33;CL:0000047,1.28e-14,33;CL:0000031,1.28e-14,33;CL:0000404,1.28e-14,33;CL:0000393,8.99e-12,39;CL:0000211,8.99e-12,39;CL:0002319,2.53e-10,43;CL:0000221,5.30e-10,44;CL:0000133,5.30e-10,44;CL:0002612,1.10e-08,3;CL:0002613,6.96e-08,3;CL:0000120,7.33e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.18e-28!75;UBERON:0001016!2.18e-28!75;UBERON:0001017!1.45e-27!73;UBERON:0005743!1.45e-27!73;UBERON:0004121!7.11e-25!102;UBERON:0000924!7.11e-25!102;UBERON:0006601!7.11e-25!102;UBERON:0002346!3.24e-24!71;UBERON:0003075!3.24e-24!71;UBERON:0007284!3.24e-24!71;UBERON:0001049!2.82e-22!52;UBERON:0005068!2.82e-22!52;UBERON:0006241!2.82e-22!52;UBERON:0007135!2.82e-22!52;UBERON:0000033!7.66e-22!63;UBERON:0002020!5.18e-21!34;UBERON:0003056!3.29e-19!49;UBERON:0000955!9.10e-19!50;UBERON:0006238!9.10e-19!50;UBERON:0002616!5.05e-18!49;UBERON:0002791!3.01e-16!29;UBERON:0003528!3.01e-16!29;UBERON:0001893!3.01e-16!29;UBERON:0003080!4.55e-16!40;UBERON:0002780!7.19e-16!39;UBERON:0001890!7.19e-16!39;UBERON:0006240!7.19e-16!39;UBERON:0007811!5.55e-12!86;UBERON:0000956!5.75e-12!21;UBERON:0001869!5.75e-12!21;UBERON:0000203!5.75e-12!21;UBERON:0002021!3.91e-10!10;UBERON:0000411!3.91e-10!10;UBERON:0001950!3.91e-10!10;UBERON:0000153!1.33e-09!94;UBERON:0002619!2.05e-09!17;UBERON:0003076!6.41e-07!12;UBERON:0003057!6.41e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.57e-35,34;UBERON:0000073,8.80e-28,54;UBERON:0001017,4.88e-26,73;UBERON:0001016,3.81e-25,75;UBERON:0001049,8.29e-25,52;UBERON:0005068,8.29e-25,52;UBERON:0006241,8.29e-25,52;UBERON:0007135,8.29e-25,52;UBERON:0003528,9.28e-25,29;UBERON:0002791,9.28e-25,29;UBERON:0001893,9.28e-25,29;UBERON:0002346,4.79e-24,64;UBERON:0003075,4.79e-24,64;UBERON:0007284,4.79e-24,64;UBERON:0004121,1.45e-22,95;UBERON:0000924,1.45e-22,95;UBERON:0006601,1.45e-22,95;UBERON:0002021,7.12e-22,10;UBERON:0000411,7.12e-22,10;UBERON:0001950,7.12e-22,10;UBERON:0002780,2.75e-21,39;UBERON:0001890,2.75e-21,39;UBERON:0006240,2.75e-21,39;UBERON:0003056,4.05e-21,49;UBERON:0003080,1.27e-20,40;UBERON:0010371,3.14e-20,73;UBERON:0000955,1.42e-18,47;UBERON:0006238,1.42e-18,47;UBERON:0000956,1.70e-18,21;UBERON:0001869,1.70e-18,21;UBERON:0000203,1.70e-18,21;UBERON:0002619,1.39e-17,17;UBERON:0002616,2.97e-17,46;UBERON:0010314,1.25e-14,92;UBERON:0001948,1.00e-12,5;UBERON:0002315,1.00e-12,5;UBERON:0002240,1.60e-10,6;UBERON:0005174,1.60e-10,6;UBERON:0001137,1.60e-10,6;UBERON:0002257,1.10e-08,3;UBERON:0000369,3.92e-08,5;UBERON:0002435,3.92e-08,5;UBERON:0000204,3.92e-08,5;UBERON:0010082,3.92e-08,5;UBERON:0000025,6.59e-08,114;UBERON:0002420,2.36e-07,8;UBERON:0007245,2.36e-07,8;UBERON:0010009,2.36e-07,8;UBERON:0010011,2.36e-07,8;UBERON:0000454,2.36e-07,8;UBERON:0004111,5.38e-07,122 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,4.23192783417626,3.80298842103708,0,0,0,0,0,0,0,0.933206510776299,1.21505344498522,0.630974884054146,3.99911378165325,2.20868540951614,2.20483438586917,0.862609239164127,0,0,1.65993539510744,1.0752457327937,2.90149833006426,2.56165402086747,4.68822033501084,0.279182999001381,0.56276261003168,1.68078072554491,7.07108605136802,6.69146899755784,5.96478226640962,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0.301445281105245,0.117588707135705,0,0,0,0,0,0,0,0,0.878342391034642,0.83778682725382,0,0,0,0,0.149790639404823,0,5.40313714085317,1.21677024134594,2.81287003063364,1.24672826735736,1.62241263067758,0.203678727700633,0,0,0.210441855886474,0.130120442962704,0,0.180062129805349,1.05493372485001,0.476255494059295,1.2811372028485,1.03071897015702,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,0.210289948564127,5.04232600658494,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.820481806145422,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0.238968797952552,0,0.566153061577665,0.404810701674894,0.584511715822624,0.395287777946524,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0.608929898229199,0,0,0.220528398054962,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51801474093653,5.06357760157895,2.29158205375759,3.26521046453006,2.74033007908257,3.0215755895588,1.35004500046361,2.70192721934532,2.71885445390523,1.55328093525546,0.103787347584177,0,0.341467211508268,0,0.209613162627982,0.183843508450014,0.222246727801615,0.824140228955577,0,0.252697211763798,1.01391719956096,0.754505365544305,0.561849044819294,0.832326981263301,1.03383844120104,1.42888107384922,1.0429589335037,0.77163688185482,1.23625770240992,0.441596760403192,0.685738504770831,0.887379030796687,0.476872379894642,0.581385666529314,0.752875043322645,0.761531471025089,0.73171189149109,0.263069711437843,0.407412341537585,0,0.474540072496697,0.591026894253381,0,0.154936841185966,0.771626443924566,0.749431733813838,0.233931608445408,0.429742108096597,0.382576664137687,0,0 | |||
|short_description=p1@Pcdha3 | |||
}} |
Revision as of 17:44, 5 August 2015
Short description: | p1@Pcdha3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pcdha3_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -50bp_to_ENSMUST00000166050_5end |
EntrezGene: | 192163 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.06e-22 | 23 |
neuroblast (sensu Vertebrata) | 1.06e-22 | 23 |
neuron | 1.28e-14 | 33 |
neuronal stem cell | 1.28e-14 | 33 |
neuroblast | 1.28e-14 | 33 |
electrically signaling cell | 1.28e-14 | 33 |
electrically responsive cell | 8.99e-12 | 39 |
electrically active cell | 8.99e-12 | 39 |
neural cell | 2.53e-10 | 43 |
ectodermal cell | 5.30e-10 | 44 |
neurectodermal cell | 5.30e-10 | 44 |
neuron of the ventral spinal cord | 1.10e-08 | 3 |
striatum neuron | 6.96e-08 | 3 |
granule cell | 7.33e-08 | 3 |