FFCP PHASE1:Hg19::chr6:30852415..30852437,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=780 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2730 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000504152_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_DDR1_5end | |||
|id=chr6:30852415..30852437,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.39e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.51e-29!86;UBERON:0001049!8.69e-29!57;UBERON:0005068!8.69e-29!57;UBERON:0006241!8.69e-29!57;UBERON:0007135!8.69e-29!57;UBERON:0001017!3.45e-28!82;UBERON:0000073!7.04e-28!94;UBERON:0001016!7.04e-28!94;UBERON:0002346!1.49e-26!90;UBERON:0002616!2.78e-26!59;UBERON:0003075!8.25e-26!86;UBERON:0007284!8.25e-26!86;UBERON:0000475!2.38e-25!365;UBERON:0000924!2.02e-24!173;UBERON:0006601!2.02e-24!173;UBERON:0000955!3.27e-24!69;UBERON:0006238!3.27e-24!69;UBERON:0004121!1.43e-23!169;UBERON:0002780!1.78e-23!41;UBERON:0001890!1.78e-23!41;UBERON:0006240!1.78e-23!41;UBERON:0007023!5.65e-23!115;UBERON:0000033!1.94e-22!123;UBERON:0003080!2.84e-22!42;UBERON:0000153!4.49e-22!129;UBERON:0007811!4.49e-22!129;UBERON:0000481!3.28e-20!347;UBERON:0003056!4.38e-20!61;UBERON:0001893!4.80e-20!34;UBERON:0002020!5.96e-20!34;UBERON:0003528!5.96e-20!34;UBERON:0002791!2.27e-19!33;UBERON:0001869!1.36e-18!32;UBERON:0000956!3.62e-14!25;UBERON:0000203!3.62e-14!25;UBERON:0000468!4.28e-14!659;UBERON:0000483!4.32e-14!309;UBERON:0002619!4.91e-14!22;UBERON:0000119!6.60e-14!312;UBERON:0000064!3.27e-13!219;UBERON:0001950!9.25e-13!20;UBERON:0000477!3.69e-12!286;UBERON:0000922!9.65e-12!612;UBERON:0002050!1.29e-10!605;UBERON:0005423!1.29e-10!605;UBERON:0004111!1.42e-10!241;UBERON:0000923!1.82e-10!604;UBERON:0005291!1.82e-10!604;UBERON:0006598!1.82e-10!604;UBERON:0002532!1.82e-10!604;UBERON:0000025!5.53e-10!194;UBERON:0000062!8.86e-10!511;UBERON:0000467!1.35e-08!625;UBERON:0000480!2.06e-08!626;UBERON:0003076!1.13e-07!15;UBERON:0003057!1.13e-07!15;UBERON:0002308!2.54e-07!9;UBERON:0000125!2.54e-07!9;UBERON:0002420!3.89e-07!9;UBERON:0007245!3.89e-07!9;UBERON:0010009!3.89e-07!9;UBERON:0010011!3.89e-07!9;UBERON:0000454!3.89e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.32e-24;34!UBERON:0002780;7.74e-24;41!UBERON:0001890;7.74e-24;41!UBERON:0003528;9.35e-24;34!UBERON:0002020;9.35e-24;34!UBERON:0002791;1.37e-23;32!UBERON:0001869;1.53e-23;32!UBERON:0000073;1.00e-22;53!UBERON:0002616;1.00e-22;53!UBERON:0002619;5.23e-20;22!UBERON:0000956;1.31e-19;25!UBERON:0000203;1.31e-19;25!UBERON:0001950;3.87e-18;20!UBERON:0001017;1.73e-16;75!UBERON:0000955;8.79e-16;68!UBERON:0001016;2.60e-13;83!UBERON:0000125;4.44e-10;9!UBERON:0002308;4.44e-10;9!UBERON:0002420;9.08e-10;9!UBERON:0007245;9.08e-10;9!UBERON:0010009;9.08e-10;9!UBERON:0010011;9.08e-10;9!UBERON:0000454;9.08e-10;9!UBERON:0004732;2.95e-08;13!UBERON:0007023;3.13e-08;114!UBERON:0009663;3.58e-08;7!UBERON:0011216;1.02e-07;132!UBERON:0002298;1.90e-07;6!UBERON:0004733;2.72e-07;12!UBERON:0002028;2.72e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.44e-42,56;UBERON:0005068,5.44e-42,56;UBERON:0006241,5.44e-42,56;UBERON:0007135,5.44e-42,56;UBERON:0000073,7.26e-39,53;UBERON:0002616,7.26e-39,53;UBERON:0001017,1.98e-38,81;UBERON:0003075,1.02e-37,82;UBERON:0007284,1.02e-37,82;UBERON:0002346,1.25e-37,86;UBERON:0001016,1.46e-35,89;UBERON:0000955,7.74e-34,68;UBERON:0006238,7.74e-34,68;UBERON:0002780,5.41e-33,41;UBERON:0001890,5.41e-33,41;UBERON:0003080,5.41e-33,41;UBERON:0006240,5.41e-33,41;UBERON:0010371,2.14e-32,104;UBERON:0003056,7.01e-30,61;UBERON:0004121,1.12e-29,171;UBERON:0000924,1.12e-29,171;UBERON:0006601,1.12e-29,171;UBERON:0001893,6.19e-28,34;UBERON:0003528,8.48e-28,34;UBERON:0002020,8.48e-28,34;UBERON:0007023,1.68e-26,114;UBERON:0002791,7.07e-26,32;UBERON:0001869,8.33e-26,32;UBERON:0010314,2.83e-24,132;UBERON:0002619,6.86e-20,22;UBERON:0011216,7.63e-20,223;UBERON:0000956,2.57e-19,25;UBERON:0000203,2.57e-19,25;UBERON:0001950,5.15e-18,20;UBERON:0000483,1.59e-13,306;UBERON:0000119,4.69e-13,309;UBERON:0000025,5.71e-11,192;UBERON:0004111,2.43e-10,240;UBERON:0003076,4.93e-10,15;UBERON:0003057,4.93e-10,15;UBERON:0000125,4.97e-10,9;UBERON:0002308,4.97e-10,9;UBERON:0002420,9.25e-10,9;UBERON:0007245,9.25e-10,9;UBERON:0010009,9.25e-10,9;UBERON:0010011,9.25e-10,9;UBERON:0000454,9.25e-10,9;UBERON:0004732,3.33e-08,13;UBERON:0009663,3.84e-08,7;UBERON:0000923,4.62e-08,560;UBERON:0010316,4.62e-08,560;UBERON:0005291,4.62e-08,560;UBERON:0006598,4.62e-08,560;UBERON:0010317,4.62e-08,560;UBERON:0002532,4.62e-08,560;UBERON:0002050,4.86e-08,564;UBERON:0002298,1.99e-07,6;UBERON:0005423,2.03e-07,581;UBERON:0004733,3.04e-07,12;UBERON:0002028,3.04e-07,12;UBERON:0007277,3.04e-07,12;UBERON:0000922,3.35e-07,592 | |||
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| |||
|short_description=p3@DDR1 | |||
}} |
Revision as of 10:55, 22 January 2014
Short description: | p3@DDR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DDR1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000504152_5end |
EntrezGene: | DDR1 |
HGNC: | 2730 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data