FFCP PHASE1:Mm9::chr2:167174843..167174871,-: Difference between revisions
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{{FFCP|EntrezGene=56336|HGNC=|MCL_coexpression_id=13|UniProt=Q9JMK0|association_with_transcript=-160bp_to_ENSMUST00000109221_5end|description=CAGE_peak_4_at_B4galt5_5end|id=chr2:167174843..167174871,-|ontology_enrichment_celltype=CL:0000117!2.54e-13!23;CL:0000337!2.54e-13!23;CL:0002319!9.29e-09!43;CL:0000055!1.63e-08!50;CL:0000221!1.73e-08!44;CL:0000133!1.73e-08!44;CL:0000540!4.88e-08!33;CL:0000047!4.88e-08!33;CL:0000031!4.88e-08!33;CL:0000404!4.88e-08!33;CL:0000393!2.50e-07!39;CL:0000211!2.50e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,7.77e-24,23;CL:0000337,7.77e-24,23;CL:0000540,4.53e-15,33;CL:0000047,4.53e-15,33;CL:0000031,4.53e-15,33;CL:0000404,4.53e-15,33;CL:0000393,5.40e-12,39;CL:0000211,5.40e-12,39;CL:0002319,5.75e-12,43;CL:0000221,1.41e-11,44;CL:0000133,1.41e-11,44;CL:0002609,3.84e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.39e-23!73;UBERON:0005743!7.39e-23!73;UBERON:0000073!1.79e-22!75;UBERON:0001016!1.79e-22!75;UBERON:0001049!1.84e-22!52;UBERON:0005068!1.84e-22!52;UBERON:0006241!1.84e-22!52;UBERON:0007135!1.84e-22!52;UBERON:0000955!5.29e-21!50;UBERON:0006238!5.29e-21!50;UBERON:0002616!2.27e-20!49;UBERON:0002020!6.75e-19!34;UBERON:0000033!1.48e-17!63;UBERON:0003080!4.90e-17!40;UBERON:0002780!1.72e-16!39;UBERON:0001890!1.72e-16!39;UBERON:0006240!1.72e-16!39;UBERON:0004121!1.89e-16!102;UBERON:0000924!1.89e-16!102;UBERON:0006601!1.89e-16!102;UBERON:0002346!4.57e-16!71;UBERON:0003075!4.57e-16!71;UBERON:0007284!4.57e-16!71;UBERON:0002791!7.99e-16!29;UBERON:0003528!7.99e-16!29;UBERON:0001893!7.99e-16!29;UBERON:0003056!1.64e-14!49;UBERON:0007811!1.32e-13!86;UBERON:0000153!3.68e-13!94;UBERON:0000956!2.27e-11!21;UBERON:0001869!2.27e-11!21;UBERON:0000203!2.27e-11!21;UBERON:0002619!2.01e-09!17;UBERON:0000025!1.26e-08!114;UBERON:0002021!9.88e-08!10;UBERON:0000411!9.88e-08!10;UBERON:0001950!9.88e-08!10;UBERON:0004111!1.84e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.32e-38,34;UBERON:0000073,3.05e-36,54;UBERON:0001017,8.60e-34,73;UBERON:0001049,1.33e-33,52;UBERON:0005068,1.33e-33,52;UBERON:0006241,1.33e-33,52;UBERON:0007135,1.33e-33,52;UBERON:0001016,1.28e-32,75;UBERON:0003528,1.72e-32,29;UBERON:0002791,1.72e-32,29;UBERON:0001893,1.72e-32,29;UBERON:0000955,1.88e-28,47;UBERON:0006238,1.88e-28,47;UBERON:0003080,7.46e-28,40;UBERON:0002616,4.93e-27,46;UBERON:0002780,1.56e-26,39;UBERON:0001890,1.56e-26,39;UBERON:0006240,1.56e-26,39;UBERON:0002346,1.30e-25,64;UBERON:0003075,1.30e-25,64;UBERON:0007284,1.30e-25,64;UBERON:0004121,1.33e-23,95;UBERON:0000924,1.33e-23,95;UBERON:0006601,1.33e-23,95;UBERON:0000956,8.07e-23,21;UBERON:0001869,8.07e-23,21;UBERON:0000203,8.07e-23,21;UBERON:0003056,2.29e-21,49;UBERON:0010371,2.39e-21,73;UBERON:0002619,5.37e-20,17;UBERON:0002021,3.05e-15,10;UBERON:0000411,3.05e-15,10;UBERON:0001950,3.05e-15,10;UBERON:0010314,4.13e-15,92;UBERON:0000025,1.94e-11,114;UBERON:0002420,1.40e-10,8;UBERON:0007245,1.40e-10,8;UBERON:0010009,1.40e-10,8;UBERON:0010011,1.40e-10,8;UBERON:0000454,1.40e-10,8;UBERON:0004111,4.08e-10,122;UBERON:0000369,9.45e-10,5;UBERON:0002435,9.45e-10,5;UBERON:0000204,9.45e-10,5;UBERON:0010082,9.45e-10,5;UBERON:0011216,1.06e-07,194;UBERON:0002240,1.26e-07,6;UBERON:0005174,1.26e-07,6;UBERON:0001137,1.26e-07,6|phase1_expression=0.320297694209588,0,0,0.30246421130683,0,0,0,0.516493293766305,0.140788722151667,0.468129052643987,0,0,0.684802919724823,0.174840804837995,0,0,0,0,0.137114433605739,0,0.765389611359628,0.198581902401771,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0,0.418531630736908,0,0,0,0.683045484958446,0.485510353031154,0.125896817975577,0.304130793658544,0.367093504323363,0.782391344348039,0.218025156380447,0.439372365468944,0,0.699932108126813,4.31257693094915,0,0,0,0.514518872071894,0.286533439938757,0,2.02316460859598,2.64495489636016,0.633831403506179,0,0,0,0,0,0.898800331555214,0.384218305321555,1.24427534770173,1.89008313664367,0.841299845405528,2.28520787523043,2.20868540951614,1.22490799214954,1.43768206527355,2.75765635983006,1.10115880999389,1.0214987046815,1.53606533256243,2.63772575460388,2.74462930807229,2.08365348222704,1.3959149950069,1.12552522006336,0.61119299110724,2.65165726926301,2.13557521198654,0.931997229126503,0.075726193333184,0.377857800533928,0.289864488701678,0.860423876981386,0,0,0,0,0,0,0,0,0.14084341977668,1.28326477414318,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.352766121407114,0.376999773989026,0.741584903203122,0.289198713839823,0,0.161766849947409,0.441683036920787,0,0,0.585561594023094,0.83778682725382,0,0,1.19980546198682,0,1.3481157546434,1.37250180845588,3.26701315493447,1.39059456153821,1.02286182932132,1.24672826735736,1.29793010454206,0.101839363850316,0,0.505445516867349,0,0.260240885925407,0,0.540186389416048,0.30140963567143,0.408218994907967,0.2562274405697,0.655912071918102,0,0.215567992932842,0.756424320671277,0.175951124163949,0.43839146485515,0.278047249225598,0.696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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:56336 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9JMK0 | |||
|association_with_transcript=-160bp_to_ENSMUST00000109221_5end | |||
|cluster_id=chr2:167174843..167174871,- | |||
|description=CAGE_peak_4_at_B4galt5_5end | |||
|id=chr2:167174843..167174871,- | |||
|ontology_enrichment_celltype=CL:0000117!2.54e-13!23;CL:0000337!2.54e-13!23;CL:0002319!9.29e-09!43;CL:0000055!1.63e-08!50;CL:0000221!1.73e-08!44;CL:0000133!1.73e-08!44;CL:0000540!4.88e-08!33;CL:0000047!4.88e-08!33;CL:0000031!4.88e-08!33;CL:0000404!4.88e-08!33;CL:0000393!2.50e-07!39;CL:0000211!2.50e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.77e-24,23;CL:0000337,7.77e-24,23;CL:0000540,4.53e-15,33;CL:0000047,4.53e-15,33;CL:0000031,4.53e-15,33;CL:0000404,4.53e-15,33;CL:0000393,5.40e-12,39;CL:0000211,5.40e-12,39;CL:0002319,5.75e-12,43;CL:0000221,1.41e-11,44;CL:0000133,1.41e-11,44;CL:0002609,3.84e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.39e-23!73;UBERON:0005743!7.39e-23!73;UBERON:0000073!1.79e-22!75;UBERON:0001016!1.79e-22!75;UBERON:0001049!1.84e-22!52;UBERON:0005068!1.84e-22!52;UBERON:0006241!1.84e-22!52;UBERON:0007135!1.84e-22!52;UBERON:0000955!5.29e-21!50;UBERON:0006238!5.29e-21!50;UBERON:0002616!2.27e-20!49;UBERON:0002020!6.75e-19!34;UBERON:0000033!1.48e-17!63;UBERON:0003080!4.90e-17!40;UBERON:0002780!1.72e-16!39;UBERON:0001890!1.72e-16!39;UBERON:0006240!1.72e-16!39;UBERON:0004121!1.89e-16!102;UBERON:0000924!1.89e-16!102;UBERON:0006601!1.89e-16!102;UBERON:0002346!4.57e-16!71;UBERON:0003075!4.57e-16!71;UBERON:0007284!4.57e-16!71;UBERON:0002791!7.99e-16!29;UBERON:0003528!7.99e-16!29;UBERON:0001893!7.99e-16!29;UBERON:0003056!1.64e-14!49;UBERON:0007811!1.32e-13!86;UBERON:0000153!3.68e-13!94;UBERON:0000956!2.27e-11!21;UBERON:0001869!2.27e-11!21;UBERON:0000203!2.27e-11!21;UBERON:0002619!2.01e-09!17;UBERON:0000025!1.26e-08!114;UBERON:0002021!9.88e-08!10;UBERON:0000411!9.88e-08!10;UBERON:0001950!9.88e-08!10;UBERON:0004111!1.84e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.32e-38,34;UBERON:0000073,3.05e-36,54;UBERON:0001017,8.60e-34,73;UBERON:0001049,1.33e-33,52;UBERON:0005068,1.33e-33,52;UBERON:0006241,1.33e-33,52;UBERON:0007135,1.33e-33,52;UBERON:0001016,1.28e-32,75;UBERON:0003528,1.72e-32,29;UBERON:0002791,1.72e-32,29;UBERON:0001893,1.72e-32,29;UBERON:0000955,1.88e-28,47;UBERON:0006238,1.88e-28,47;UBERON:0003080,7.46e-28,40;UBERON:0002616,4.93e-27,46;UBERON:0002780,1.56e-26,39;UBERON:0001890,1.56e-26,39;UBERON:0006240,1.56e-26,39;UBERON:0002346,1.30e-25,64;UBERON:0003075,1.30e-25,64;UBERON:0007284,1.30e-25,64;UBERON:0004121,1.33e-23,95;UBERON:0000924,1.33e-23,95;UBERON:0006601,1.33e-23,95;UBERON:0000956,8.07e-23,21;UBERON:0001869,8.07e-23,21;UBERON:0000203,8.07e-23,21;UBERON:0003056,2.29e-21,49;UBERON:0010371,2.39e-21,73;UBERON:0002619,5.37e-20,17;UBERON:0002021,3.05e-15,10;UBERON:0000411,3.05e-15,10;UBERON:0001950,3.05e-15,10;UBERON:0010314,4.13e-15,92;UBERON:0000025,1.94e-11,114;UBERON:0002420,1.40e-10,8;UBERON:0007245,1.40e-10,8;UBERON:0010009,1.40e-10,8;UBERON:0010011,1.40e-10,8;UBERON:0000454,1.40e-10,8;UBERON:0004111,4.08e-10,122;UBERON:0000369,9.45e-10,5;UBERON:0002435,9.45e-10,5;UBERON:0000204,9.45e-10,5;UBERON:0010082,9.45e-10,5;UBERON:0011216,1.06e-07,194;UBERON:0002240,1.26e-07,6;UBERON:0005174,1.26e-07,6;UBERON:0001137,1.26e-07,6 | |||
|phase1_expression=0.320297694209588,0,0,0.30246421130683,0,0,0,0.516493293766305,0.140788722151667,0.468129052643987,0,0,0.684802919724823,0.174840804837995,0,0,0,0,0.137114433605739,0,0.765389611359628,0.198581902401771,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0,0.418531630736908,0,0,0,0.683045484958446,0.485510353031154,0.125896817975577,0.304130793658544,0.367093504323363,0.782391344348039,0.218025156380447,0.439372365468944,0,0.699932108126813,4.31257693094915,0,0,0,0.514518872071894,0.286533439938757,0,2.02316460859598,2.64495489636016,0.633831403506179,0,0,0,0,0,0.898800331555214,0.384218305321555,1.24427534770173,1.89008313664367,0.841299845405528,2.28520787523043,2.20868540951614,1.22490799214954,1.43768206527355,2.75765635983006,1.10115880999389,1.0214987046815,1.53606533256243,2.63772575460388,2.74462930807229,2.08365348222704,1.3959149950069,1.12552522006336,0.61119299110724,2.65165726926301,2.13557521198654,0.931997229126503,0.075726193333184,0.377857800533928,0.289864488701678,0.860423876981386,0,0,0,0,0,0,0,0,0.14084341977668,1.28326477414318,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.352766121407114,0.376999773989026,0.741584903203122,0.289198713839823,0,0.161766849947409,0.441683036920787,0,0,0.585561594023094,0.83778682725382,0,0,1.19980546198682,0,1.3481157546434,1.37250180845588,3.26701315493447,1.39059456153821,1.02286182932132,1.24672826735736,1.29793010454206,0.101839363850316,0,0.505445516867349,0,0.260240885925407,0,0.540186389416048,0.30140963567143,0.408218994907967,0.2562274405697,0.655912071918102,0,0.215567992932842,0.756424320671277,0.175951124163949,0.43839146485515,0.278047249225598,0.696504333044333,0,0.398068533636986,0.702213187313235,0,0.284163499395593,0.207125772535502,0,0,0.710234206755631,0.590292695242212,0.154267112887378,0.465067889500816,0.804820204198858,0,0.329119699826961,0.492502392237286,0.405344047729279,0.438599962275997,0,0.134206418760372,2.10289948564127,3.49875682089567,0,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0,0,0,0,0,0.189667900953082,0,0,0.610953983535943,0,0.280543279561274,0.126473074248515,0.147610147979602,0.470996183524124,0.123397163921801,0,0.166845105716094,0,0.224862112384854,0,0,0.25462585178142,0,0,0,1.43768206527355,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.169745085775188,0,0.335012514883631,0,0.975668239288994,0.157635144106191,0.221464689648775,0,0,0.345369963731791,0.144649058581512,0,0,0,0,1.28440471990234,1.05490517932983,0,0.252470927204373,0,0.390438744296638,0,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0,1.92792789853084,0.141940085208269,0.534196811001766,0.325773918707152,0.494910368917606,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0.36012218806262,0.258717367565509,0.428674070063185,0.709360934569094,0.713475270408282,0.164549020602121,0.304464949114599,0.469343416127421,0.63549621259146,0,0.16488625294148,0.322928853391811,0.120625849856312,0,0.328281799490123,0,1.11255181206306,0,0.82554747185289,0,0,0,0.228778173206523,0.339956859987711,0.139951452323658,0.276399947608848,0,0.474503990371703,0.813277868507395,0.108005340821801,0,0,0.134864346384821,0.330613822901344,0,0,0.621339313086926,2.25477175473676,0.598066184175915,0.330916980914195,0.583353565032143,0.258319646955462,0.506868376472335,0,0.13020438484395,0.104859344425711,1.20792060413003,1.72818003754719,0.316011120628178,0.405450430580328,0.513554785824136,0.129920822977795,0.358053391334963,0.39736270956253,0.240390899039938,0,0.201932899896295,0.228620419965,0.201652370273681,0.292373642219257,0,0.116876902181569,0,0,0.358855426437903,0.167884616364078,0,0,0,0.214368379079066,0,5.64751842617067,3.22227665555024,5.72895513439397,3.26521046453006,1.37016503954128,1.5107877947794,2.70009000092722,3.15224842256954,0.906284817968409,3.10656187051092,0,1.99512436700516,0.512200817262403,0.972426868273176,0.209613162627982,0.183843508450014,0.888986911206461,0.206035057238894,0.962757628775446,0.252697211763798,0.25347929989024,0,0.37456602987953,0.192075457214608,0.689225627467359,0.476293691283074,0.463537303779422,0.38581844092741,0,0.147198920134397,1.02860775715625,0.354951612318675,0.715308569841963,0.436039249896986,0.564656282491984,0.423073039458382,0.365855945745545,1.05227884575137,0.135804113845862,0.561142271657738,0.474540072496697,0.29551344712669,0.818462086339379,0.929621047115796,0.192906610981141,2.49810577937946,0,0.429742108096597,0.191288332068843,0.441182838239031,0 | |||
|short_description=p4@B4galt5 | |||
}} |
Revision as of 14:23, 4 August 2015
Short description: | p4@B4galt5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_B4galt5_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -160bp_to_ENSMUST00000109221_5end |
EntrezGene: | 56336 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.77e-24 | 23 |
neuroblast (sensu Vertebrata) | 7.77e-24 | 23 |
neuron | 4.53e-15 | 33 |
neuronal stem cell | 4.53e-15 | 33 |
neuroblast | 4.53e-15 | 33 |
electrically signaling cell | 4.53e-15 | 33 |
electrically responsive cell | 5.40e-12 | 39 |
electrically active cell | 5.40e-12 | 39 |
neural cell | 5.75e-12 | 43 |
ectodermal cell | 1.41e-11 | 44 |
neurectodermal cell | 1.41e-11 | 44 |
neuron of cerebral cortex | 3.84e-07 | 6 |