FFCP PHASE1:Mm9::chr5:121010361..121010381,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=252972|HGNC=|MCL_coexpression_id=115|UniProt=Q3UV38|association_with_transcript=22bp_to_uc008zhl.1_5end|description=CAGE_peak_4_at_Tpcn1_5end|id=chr5:121010361..121010381,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000557,1.94e-13,7;CL:0000049,1.22e-08,19;CL:0002194,3.92e-08,4;CL:0000766,3.92e-08,4;CL:0000234,3.92e-08,4;CL:0000576,3.92e-08,4;CL:0000235,3.92e-08,4;CL:0000864,3.92e-08,4;CL:0002009,3.92e-08,4;CL:0000040,3.92e-08,4;CL:0000559,3.92e-08,4|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.73e-12,32;UBERON:0001474,1.18e-11,22;UBERON:0004765,1.18e-11,22;UBERON:0001434,1.18e-11,22;UBERON:0005418,2.31e-08,5;UBERON:0002472,2.31e-08,5;UBERON:0008784,2.31e-08,5;UBERON:0006058,2.31e-08,5;UBERON:0004709,2.31e-08,5;UBERON:0002529,2.31e-08,5;UBERON:0010538,2.31e-08,5;UBERON:0005420,2.31e-08,5;UBERON:0010758,2.31e-08,5;UBERON:0000978,2.31e-08,5;UBERON:0002103,2.31e-08,5;UBERON:0000376,2.31e-08,5;UBERON:0000154,2.31e-08,5;UBERON:0010709,2.31e-08,5;UBERON:0005730,2.31e-08,5;UBERON:0002371,3.43e-08,16;UBERON:0000981,1.84e-07,4;UBERON:0003608,1.84e-07,4;UBERON:0003826,1.84e-07,4;UBERON:0008202,1.84e-07,4;UBERON:0004381,1.84e-07,4;UBERON:0007273,1.84e-07,4;UBERON:0010912,1.84e-07,4;UBERON:0002513,1.84e-07,4;UBERON:0004375,1.84e-07,4;UBERON:0010740,1.84e-07,4;UBERON:0010363,1.84e-07,4;UBERON:0003860,1.84e-07,4;UBERON:0002428,1.84e-07,4;UBERON:0010742,1.84e-07,4;UBERON:0002495,1.84e-07,4;UBERON:0003464,1.84e-07,4;UBERON:0003606,1.84e-07,4;UBERON:0005893,1.84e-07,4;UBERON:0009749,1.84e-07,4;UBERON:0010712,1.84e-07,4;UBERON:0010886,1.84e-07,4;UBERON:0005254,1.84e-07,4;UBERON:0010885,1.84e-07,4;UBERON:0010881,1.84e-07,4;UBERON:0010882,1.84e-07,4;UBERON:0007844,1.84e-07,4;UBERON:0001441,1.84e-07,4;UBERON:0011249,1.84e-07,4;UBERON:0002091,1.84e-07,4;UBERON:0003285,1.84e-07,4;UBERON:0004288,1.84e-07,4;UBERON:0010129,1.84e-07,4;UBERON:0006234,1.84e-07,4|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0.202475267389826,0,0,0.137114433605739,0.42438965179803,0.0850432901510698,6.35462087685666,2.35079810225042,0.639969691173627,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,3.906676722619,1.0470474879476,0.588231488031014,1.36609096991689,0.485510353031154,0.125896817975577,0.405507724878058,0,0,0,0,0,0.55994568650145,0,0,0,0,0,0.286533439938757,0,0,0.528990979272033,0,0.338844532069132,0.889294796111139,0.449949858640699,2.96659908770092,1.4209602298922,5.69240209984969,3.07374644257244,0.207379224616955,0.135005938331691,0.420649922702764,0,0,0,0,0,1.10115880999389,0.638436690425939,0.46081959976873,0.131886287730194,0.0914876436024097,0,0,0.56276261003168,0.30559649555362,0.883885756421003,0,0.372798891650601,0,0.453429360640713,0,0,0,0,0,0,0.280888840263504,0,0.259786004602869,0,0,1.28326477414318,0,0,0,0,0,0,0.258937883647172,0.445326417194474,0.346970653532272,0.304465478312141,0,0.452167921657868,0.23517741427141,0,0.741584903203122,0.433798070759735,2.65383165584962,2.58826959915855,2.20841518460394,1.93950101254089,0,0,1.25668024088073,0,31.3915626205511,14.3976655438418,28.0825201831473,0.449371918214468,0.457500602818626,0,0,0,0,0.324482526135515,0.916554274652847,2.11491850037158,1.26361379216837,0.210441855886474,0.130120442962704,0,0.180062129805349,0.150704817835715,0.272145996605311,0.12811372028485,0.187403449119458,0,0.215567992932842,0.378212160335639,0.527853372491847,0.876782929710299,0,1.39300866608867,0.205782136407943,0,21.066395619397,24.4480511758979,23.8697339492298,0.207125772535502,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0.16455984991348,0.32833492815819,0.243206428637567,0.146199987425332,0.439100230582101,0.805238512562231,0,0.308713837137853,0,0,0.213288250535234,0.232236671860439,0.644337306610467,0.403367049246685,0.667134131534611,0,0,0.164698954724011,0.251335208800269,0.596869416123452,0.19496408711912,0.898819408654221,0,0.398282546508734,0.379335801906163,0.228497025219458,0,0.407302655690628,0.387904974335251,0.350679099451593,0,0,0.31399745568275,0.123397163921801,0.296452627087149,1.66845105716094,0.589676985339609,0.674586337154561,1.42002084971952,2.65294875727659,0.50925170356284,0.287696137450811,1.29708181420028,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0,0,1.29327233116623,0,0.162964976442026,0.339490171550376,0,0.167506257441816,0,0,0.630540576424764,0.221464689648775,0.159454768657487,0.491589944147214,0.518054945597687,0.289298117163023,15.0791283939272,11.9659250440116,0.491764273019036,0,0.481651769963376,0.234423373184406,0,1.00988370881749,0,0.390438744296638,0,0,0.445597348164788,0,1.21443210502468,0.876767573733936,0.790575555893047,0.321321316421807,0.425820255624806,0.178065603667255,0.488660878060728,0.659880491890142,0,2.42780636154981,0.604647113929502,0.565815239267694,1.47650946440386,0.307435147943927,0.516856586336442,0,0.712994756769443,0,0,0,0,0.36012218806262,0.517434735131018,0.857348140126369,0,0.535106452806212,0.329098041204242,0,0,0.21183207086382,0,0.65954501176592,0.968786560175433,0.241251699712623,0.119372344003136,0.164140899745061,0.291480836629851,0.927126510052548,0.341741761595705,0.619160603889667,1.29636169158798,0.941842285023455,0.410082683163076,0,13.5982743995084,14.8348539463077,15.6165970398999,0,0,0.813277868507395,0.324016022465404,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0.259229946583586,0,0,0,0.330916980914195,1.36115831840833,1.29159823477731,1.85851738039856,0.58678619322877,0.781226309063701,0.524296722128554,0.241584120826006,0.288030006257865,0,0.608175645870493,0.205421914329655,0.649604114888975,0,0.993406773906324,0,0,0,0,0.201652370273681,0,0.0962118416403295,0,0.680191150845634,0,0,0,0.19318959403219,1.31377732815827,0.183151624267265,0.214368379079066,0.501572104035363,0,1.84130094602871,1.14579102687879,0.343706364687375,0,0.755393897389701,0,0,0.453142408984205,0,0.207574695168353,0,0.682934423016537,0.972426868273176,0.628839487883947,0.919217542250071,0.666740183404846,0.618105171716683,0,0.758091635291392,0.760437899670719,1.13175804831646,0.280924522409647,1.02440243847791,0.631790158511746,0,0.695305955669133,0.578727661391115,1.23625770240992,0.441596760403192,0.685738504770831,0.532427418478012,0.476872379894642,0.290692833264657,0.752875043322645,0.592302255241736,0.365855945745545,0.263069711437843,0.135804113845862,1.68342681497322,0.355905054372522,0.29551344712669,0.409231043169689,0.154936841185966,1.35034627686799,1.24905288968973,0.935726433781634,0.859484216193193,0.765153328275374,2.20591419119516,2.31867835620421|short_description=p4@Tpcn1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:252972 | |||
|HGNC= | |||
|MCL_coexpression_id=115 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3UV38 | |||
|association_with_transcript=22bp_to_uc008zhl.1_5end | |||
|cluster_id=chr5:121010361..121010381,- | |||
|description=CAGE_peak_4_at_Tpcn1_5end | |||
|id=chr5:121010361..121010381,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.94e-13,7;CL:0000049,1.22e-08,19;CL:0002194,3.92e-08,4;CL:0000766,3.92e-08,4;CL:0000234,3.92e-08,4;CL:0000576,3.92e-08,4;CL:0000235,3.92e-08,4;CL:0000864,3.92e-08,4;CL:0002009,3.92e-08,4;CL:0000040,3.92e-08,4;CL:0000559,3.92e-08,4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.73e-12,32;UBERON:0001474,1.18e-11,22;UBERON:0004765,1.18e-11,22;UBERON:0001434,1.18e-11,22;UBERON:0005418,2.31e-08,5;UBERON:0002472,2.31e-08,5;UBERON:0008784,2.31e-08,5;UBERON:0006058,2.31e-08,5;UBERON:0004709,2.31e-08,5;UBERON:0002529,2.31e-08,5;UBERON:0010538,2.31e-08,5;UBERON:0005420,2.31e-08,5;UBERON:0010758,2.31e-08,5;UBERON:0000978,2.31e-08,5;UBERON:0002103,2.31e-08,5;UBERON:0000376,2.31e-08,5;UBERON:0000154,2.31e-08,5;UBERON:0010709,2.31e-08,5;UBERON:0005730,2.31e-08,5;UBERON:0002371,3.43e-08,16;UBERON:0000981,1.84e-07,4;UBERON:0003608,1.84e-07,4;UBERON:0003826,1.84e-07,4;UBERON:0008202,1.84e-07,4;UBERON:0004381,1.84e-07,4;UBERON:0007273,1.84e-07,4;UBERON:0010912,1.84e-07,4;UBERON:0002513,1.84e-07,4;UBERON:0004375,1.84e-07,4;UBERON:0010740,1.84e-07,4;UBERON:0010363,1.84e-07,4;UBERON:0003860,1.84e-07,4;UBERON:0002428,1.84e-07,4;UBERON:0010742,1.84e-07,4;UBERON:0002495,1.84e-07,4;UBERON:0003464,1.84e-07,4;UBERON:0003606,1.84e-07,4;UBERON:0005893,1.84e-07,4;UBERON:0009749,1.84e-07,4;UBERON:0010712,1.84e-07,4;UBERON:0010886,1.84e-07,4;UBERON:0005254,1.84e-07,4;UBERON:0010885,1.84e-07,4;UBERON:0010881,1.84e-07,4;UBERON:0010882,1.84e-07,4;UBERON:0007844,1.84e-07,4;UBERON:0001441,1.84e-07,4;UBERON:0011249,1.84e-07,4;UBERON:0002091,1.84e-07,4;UBERON:0003285,1.84e-07,4;UBERON:0004288,1.84e-07,4;UBERON:0010129,1.84e-07,4;UBERON:0006234,1.84e-07,4 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0.202475267389826,0,0,0.137114433605739,0.42438965179803,0.0850432901510698,6.35462087685666,2.35079810225042,0.639969691173627,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,3.906676722619,1.0470474879476,0.588231488031014,1.36609096991689,0.485510353031154,0.125896817975577,0.405507724878058,0,0,0,0,0,0.55994568650145,0,0,0,0,0,0.286533439938757,0,0,0.528990979272033,0,0.338844532069132,0.889294796111139,0.449949858640699,2.96659908770092,1.4209602298922,5.69240209984969,3.07374644257244,0.207379224616955,0.135005938331691,0.420649922702764,0,0,0,0,0,1.10115880999389,0.638436690425939,0.46081959976873,0.131886287730194,0.0914876436024097,0,0,0.56276261003168,0.30559649555362,0.883885756421003,0,0.372798891650601,0,0.453429360640713,0,0,0,0,0,0,0.280888840263504,0,0.259786004602869,0,0,1.28326477414318,0,0,0,0,0,0,0.258937883647172,0.445326417194474,0.346970653532272,0.304465478312141,0,0.452167921657868,0.23517741427141,0,0.741584903203122,0.433798070759735,2.65383165584962,2.58826959915855,2.20841518460394,1.93950101254089,0,0,1.25668024088073,0,31.3915626205511,14.3976655438418,28.0825201831473,0.449371918214468,0.457500602818626,0,0,0,0,0.324482526135515,0.916554274652847,2.11491850037158,1.26361379216837,0.210441855886474,0.130120442962704,0,0.180062129805349,0.150704817835715,0.272145996605311,0.12811372028485,0.187403449119458,0,0.215567992932842,0.378212160335639,0.527853372491847,0.876782929710299,0,1.39300866608867,0.205782136407943,0,21.066395619397,24.4480511758979,23.8697339492298,0.207125772535502,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0.16455984991348,0.32833492815819,0.243206428637567,0.146199987425332,0.439100230582101,0.805238512562231,0,0.308713837137853,0,0,0.213288250535234,0.232236671860439,0.644337306610467,0.403367049246685,0.667134131534611,0,0,0.164698954724011,0.251335208800269,0.596869416123452,0.19496408711912,0.898819408654221,0,0.398282546508734,0.379335801906163,0.228497025219458,0,0.407302655690628,0.387904974335251,0.350679099451593,0,0,0.31399745568275,0.123397163921801,0.296452627087149,1.66845105716094,0.589676985339609,0.674586337154561,1.42002084971952,2.65294875727659,0.50925170356284,0.287696137450811,1.29708181420028,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0,0,1.29327233116623,0,0.162964976442026,0.339490171550376,0,0.167506257441816,0,0,0.630540576424764,0.221464689648775,0.159454768657487,0.491589944147214,0.518054945597687,0.289298117163023,15.0791283939272,11.9659250440116,0.491764273019036,0,0.481651769963376,0.234423373184406,0,1.00988370881749,0,0.390438744296638,0,0,0.445597348164788,0,1.21443210502468,0.876767573733936,0.790575555893047,0.321321316421807,0.425820255624806,0.178065603667255,0.488660878060728,0.659880491890142,0,2.42780636154981,0.604647113929502,0.565815239267694,1.47650946440386,0.307435147943927,0.516856586336442,0,0.712994756769443,0,0,0,0,0.36012218806262,0.517434735131018,0.857348140126369,0,0.535106452806212,0.329098041204242,0,0,0.21183207086382,0,0.65954501176592,0.968786560175433,0.241251699712623,0.119372344003136,0.164140899745061,0.291480836629851,0.927126510052548,0.341741761595705,0.619160603889667,1.29636169158798,0.941842285023455,0.410082683163076,0,13.5982743995084,14.8348539463077,15.6165970398999,0,0,0.813277868507395,0.324016022465404,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0.259229946583586,0,0,0,0.330916980914195,1.36115831840833,1.29159823477731,1.85851738039856,0.58678619322877,0.781226309063701,0.524296722128554,0.241584120826006,0.288030006257865,0,0.608175645870493,0.205421914329655,0.649604114888975,0,0.993406773906324,0,0,0,0,0.201652370273681,0,0.0962118416403295,0,0.680191150845634,0,0,0,0.19318959403219,1.31377732815827,0.183151624267265,0.214368379079066,0.501572104035363,0,1.84130094602871,1.14579102687879,0.343706364687375,0,0.755393897389701,0,0,0.453142408984205,0,0.207574695168353,0,0.682934423016537,0.972426868273176,0.628839487883947,0.919217542250071,0.666740183404846,0.618105171716683,0,0.758091635291392,0.760437899670719,1.13175804831646,0.280924522409647,1.02440243847791,0.631790158511746,0,0.695305955669133,0.578727661391115,1.23625770240992,0.441596760403192,0.685738504770831,0.532427418478012,0.476872379894642,0.290692833264657,0.752875043322645,0.592302255241736,0.365855945745545,0.263069711437843,0.135804113845862,1.68342681497322,0.355905054372522,0.29551344712669,0.409231043169689,0.154936841185966,1.35034627686799,1.24905288968973,0.935726433781634,0.859484216193193,0.765153328275374,2.20591419119516,2.31867835620421 | |||
|short_description=p4@Tpcn1 | |||
}} |
Revision as of 04:24, 6 August 2015
Short description: | p4@Tpcn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Tpcn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:115 |
Association with transcript: | 22bp_to_uc008zhl.1_5end |
EntrezGene: | 252972 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.94e-13 | 7 |
common myeloid progenitor | 1.22e-08 | 19 |
monopoietic cell | 3.92e-08 | 4 |
myeloid leukocyte | 3.92e-08 | 4 |
phagocyte | 3.92e-08 | 4 |
monocyte | 3.92e-08 | 4 |
macrophage | 3.92e-08 | 4 |
tissue-resident macrophage | 3.92e-08 | 4 |
macrophage dendritic cell progenitor | 3.92e-08 | 4 |
monoblast | 3.92e-08 | 4 |
promonocyte | 3.92e-08 | 4 |