FFCP PHASE1:Hg19::chr9:104032030..104032094,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54886 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000463206_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_2_at_LPPR1_5end | |||
|id=chr9:104032030..104032094,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.45e-23;82!UBERON:0006241;2.11e-11;3!UBERON:0003057;2.11e-11;3!UBERON:0006215;6.94e-10;3!UBERON:0010122;9.18e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.30e-99!57;UBERON:0005068!7.30e-99!57;UBERON:0006241!7.30e-99!57;UBERON:0007135!7.30e-99!57;UBERON:0001017!6.16e-93!82;UBERON:0005743!2.78e-91!86;UBERON:0000073!6.58e-88!94;UBERON:0001016!6.58e-88!94;UBERON:0002616!2.94e-82!59;UBERON:0000955!4.83e-78!69;UBERON:0006238!4.83e-78!69;UBERON:0002780!7.56e-73!41;UBERON:0001890!7.56e-73!41;UBERON:0006240!7.56e-73!41;UBERON:0003075!9.10e-73!86;UBERON:0007284!9.10e-73!86;UBERON:0003080!6.54e-71!42;UBERON:0002346!5.93e-69!90;UBERON:0001893!1.09e-68!34;UBERON:0002020!2.77e-68!34;UBERON:0003528!2.77e-68!34;UBERON:0002791!3.19e-66!33;UBERON:0001869!3.23e-63!32;UBERON:0002619!1.96e-52!22;UBERON:0003056!1.53e-51!61;UBERON:0004121!3.55e-48!169;UBERON:0007023!5.54e-48!115;UBERON:0001950!1.43e-47!20;UBERON:0000924!9.95e-47!173;UBERON:0006601!9.95e-47!173;UBERON:0000956!1.25e-45!25;UBERON:0000203!1.25e-45!25;UBERON:0000033!2.16e-44!123;UBERON:0000153!9.91e-42!129;UBERON:0007811!9.91e-42!129;UBERON:0003076!1.58e-27!15;UBERON:0003057!1.58e-27!15;UBERON:0002420!1.56e-24!9;UBERON:0007245!1.56e-24!9;UBERON:0010009!1.56e-24!9;UBERON:0010011!1.56e-24!9;UBERON:0000454!1.56e-24!9;UBERON:0002308!4.04e-24!9;UBERON:0000125!4.04e-24!9;UBERON:0004732!1.09e-22!13;UBERON:0000025!1.96e-22!194;UBERON:0004733!4.21e-20!12;UBERON:0002028!4.21e-20!12;UBERON:0007277!4.21e-20!12;UBERON:0009663!1.80e-19!7;UBERON:0002298!2.70e-16!8;UBERON:0001871!3.18e-16!7;UBERON:0000200!5.08e-16!6;UBERON:0004111!1.43e-15!241;UBERON:0000483!2.40e-14!309;UBERON:0000349!3.83e-14!5;UBERON:0000119!4.49e-14!312;UBERON:0000064!5.60e-14!219;UBERON:0001872!6.56e-14!5;UBERON:0002021!1.15e-13!5;UBERON:0002680!2.64e-13!9;UBERON:0001895!2.64e-13!9;UBERON:0010092!2.64e-13!9;UBERON:0000477!1.20e-12!286;UBERON:0000475!1.89e-11!365;UBERON:0000369!2.17e-11!4;UBERON:0002435!2.17e-11!4;UBERON:0000204!2.17e-11!4;UBERON:0010082!2.17e-11!4;UBERON:0002240!2.09e-09!3;UBERON:0002771!4.75e-09!3;UBERON:0006331!4.88e-09!3;UBERON:0000988!5.89e-09!3;UBERON:0001896!7.50e-09!3;UBERON:0005290!7.50e-09!3;UBERON:0010096!7.50e-09!3;UBERON:0005383!9.04e-09!3;UBERON:0005382!9.04e-09!3;UBERON:0001897!3.77e-07!2;UBERON:0005162!3.77e-07!2;UBERON:0000122!3.77e-07!2;UBERON:0001875!4.23e-07!2;UBERON:0006514!4.23e-07!2;UBERON:0000062!5.08e-07!511;UBERON:0001894!8.47e-07!7;UBERON:0006222!8.47e-07!7;UBERON:0002037!8.60e-07!6;UBERON:0006215!8.60e-07!6;UBERON:0001876!9.61e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.34e-70;34!UBERON:0003528;7.58e-67;34!UBERON:0002020;7.58e-67;34!UBERON:0002791;5.15e-66;32!UBERON:0001869;7.23e-66;32!UBERON:0002780;1.98e-61;41!UBERON:0001890;1.98e-61;41!UBERON:0002619;1.09e-59;22!UBERON:0000073;2.01e-59;53!UBERON:0002616;2.01e-59;53!UBERON:0001950;1.17e-53;20!UBERON:0000956;3.81e-52;25!UBERON:0000203;3.81e-52;25!UBERON:0001017;1.37e-42;75!UBERON:0000955;3.95e-41;68!UBERON:0001016;5.18e-35;83!UBERON:0002420;3.08e-30;9!UBERON:0007245;3.08e-30;9!UBERON:0010009;3.08e-30;9!UBERON:0010011;3.08e-30;9!UBERON:0000454;3.08e-30;9!UBERON:0000125;9.78e-30;9!UBERON:0002308;9.78e-30;9!UBERON:0009663;6.64e-24;7!UBERON:0004732;1.48e-23;13!UBERON:0004733;1.87e-20;12!UBERON:0002028;1.87e-20;12!UBERON:0002298;1.12e-19;6!UBERON:0000200;1.39e-19;6!UBERON:0000349;3.15e-17;5!UBERON:0001872;6.06e-17;5!UBERON:0001871;7.38e-17;6!UBERON:0007023;9.63e-17;114!UBERON:0000369;8.23e-14;4!UBERON:0002435;8.23e-14;4!UBERON:0000204;8.23e-14;4!UBERON:0011216;1.86e-13;132!UBERON:0002680;2.00e-12;9!UBERON:0001895;2.00e-12;9!UBERON:0002240;2.11e-11;3!UBERON:0005174;2.11e-11;3!UBERON:0001137;2.11e-11;3!UBERON:0002021;2.38e-11;5!UBERON:0000988;8.53e-11;3!UBERON:0001870;9.27e-11;3!UBERON:0001896;1.32e-10;3!UBERON:0005290;1.32e-10;3!UBERON:0005383;1.43e-10;3!UBERON:0005382;1.43e-10;3!UBERON:0010314;2.78e-09;132!UBERON:0001897;1.52e-08;2!UBERON:0005162;1.52e-08;2!UBERON:0000122;1.52e-08;2!UBERON:0010225;1.52e-08;2!UBERON:0001875;1.79e-08;2!UBERON:0006514;1.79e-08;2!UBERON:0002784;1.81e-08;4!UBERON:0001894;2.43e-08;7!UBERON:0001876;4.87e-08;2!UBERON:0001873;9.18e-08;2!UBERON:0002702;1.09e-07;2!UBERON:0002771;1.22e-07;2!UBERON:0001954;1.22e-07;2!UBERON:0003022;1.22e-07;2!UBERON:0002421;1.22e-07;2!UBERON:0002600;1.22e-07;2!UBERON:0002148;1.55e-07;2!UBERON:0006331;1.55e-07;2!UBERON:0009662;1.55e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.51e-117,56;UBERON:0005068,9.51e-117,56;UBERON:0006241,9.51e-117,56;UBERON:0007135,9.51e-117,56;UBERON:0000073,7.24e-107,53;UBERON:0002616,7.24e-107,53;UBERON:0001017,9.65e-100,81;UBERON:0001016,6.70e-93,89;UBERON:0000955,1.10e-92,68;UBERON:0006238,1.10e-92,68;UBERON:0002780,1.70e-86,41;UBERON:0001890,1.70e-86,41;UBERON:0003080,1.70e-86,41;UBERON:0006240,1.70e-86,41;UBERON:0001893,1.02e-80,34;UBERON:0003075,1.15e-80,82;UBERON:0007284,1.15e-80,82;UBERON:0003528,3.19e-80,34;UBERON:0002020,3.19e-80,34;UBERON:0002346,1.92e-76,86;UBERON:0002791,3.02e-74,32;UBERON:0001869,6.20e-74,32;UBERON:0010371,2.84e-64,104;UBERON:0002619,1.01e-59,22;UBERON:0003056,1.61e-59,61;UBERON:0007023,8.13e-56,114;UBERON:0001950,1.12e-53,20;UBERON:0000956,3.56e-52,25;UBERON:0000203,3.56e-52,25;UBERON:0010314,1.78e-48,132;UBERON:0004121,1.66e-45,171;UBERON:0000924,1.66e-45,171;UBERON:0006601,1.66e-45,171;UBERON:0011216,1.17e-33,223;UBERON:0002420,2.88e-30,9;UBERON:0007245,2.88e-30,9;UBERON:0010009,2.88e-30,9;UBERON:0010011,2.88e-30,9;UBERON:0000454,2.88e-30,9;UBERON:0000125,9.47e-30,9;UBERON:0002308,9.47e-30,9;UBERON:0003076,1.73e-29,15;UBERON:0003057,1.73e-29,15;UBERON:0000025,1.07e-26,192;UBERON:0009663,6.20e-24,7;UBERON:0004732,1.30e-23,13;UBERON:0004733,1.66e-20,12;UBERON:0002028,1.66e-20,12;UBERON:0007277,1.66e-20,12;UBERON:0002298,9.83e-20,6;UBERON:0000200,1.28e-19,6;UBERON:0004111,3.40e-19,240;UBERON:0000349,2.84e-17,5;UBERON:0001872,5.58e-17,5;UBERON:0001871,6.98e-17,6;UBERON:0000483,1.48e-14,306;UBERON:0000119,2.63e-14,309;UBERON:0000369,7.83e-14,4;UBERON:0002435,7.83e-14,4;UBERON:0000204,7.83e-14,4;UBERON:0010082,7.83e-14,4;UBERON:0002680,1.96e-12,9;UBERON:0001895,1.96e-12,9;UBERON:0010092,1.96e-12,9;UBERON:0002240,2.34e-11,3;UBERON:0005174,2.34e-11,3;UBERON:0001137,2.34e-11,3;UBERON:0002021,2.55e-11,5;UBERON:0000988,8.53e-11,3;UBERON:0001870,1.01e-10,3;UBERON:0001896,1.15e-10,3;UBERON:0005290,1.15e-10,3;UBERON:0010096,1.15e-10,3;UBERON:0005383,1.46e-10,3;UBERON:0005382,1.46e-10,3;UBERON:0001897,1.52e-08,2;UBERON:0005162,1.52e-08,2;UBERON:0000122,1.52e-08,2;UBERON:0010225,1.52e-08,2;UBERON:0001875,1.75e-08,2;UBERON:0006514,1.75e-08,2;UBERON:0002784,1.95e-08,4;UBERON:0001894,2.58e-08,7;UBERON:0006222,2.58e-08,7;UBERON:0001876,4.87e-08,2;UBERON:0001873,9.34e-08,2;UBERON:0010122,9.34e-08,2;UBERON:0002702,9.99e-08,2;UBERON:0002771,1.03e-07,2;UBERON:0001954,1.18e-07,2;UBERON:0003022,1.18e-07,2;UBERON:0002421,1.18e-07,2;UBERON:0002600,1.18e-07,2;UBERON:0002148,1.60e-07,2;UBERON:0006331,1.60e-07,2;UBERON:0009662,1.60e-07,2;UBERON:0000923,8.67e-07,560;UBERON:0010316,8.67e-07,560;UBERON:0005291,8.67e-07,560;UBERON:0006598,8.67e-07,560;UBERON:0010317,8.67e-07,560;UBERON:0002532,8.67e-07,560 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1434978119451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0.837581326671744,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9239194209619,12.0975698113041,0,0.16480387422676,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,18.4173221758092,11.4104760739077,5.98841394003583,0,0,0,0,0,0,20.3398590212464,2.91604613383254,0.868124974666461,13.2861207872076,7.83876851065152,7.62908681585416,2.43274371848694,1.77328571372128,7.23971810608109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.8256509263095,0,30.6886423900194,0,0,0,0,0,1.22429104652196,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.87549926029384,0,0,11.2693216801464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.0294202096853,16.4286454670392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.54275627771164,11.5772895194839,0,0,0,0,0,11.5424157650247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.69622172711629,10.4463755376725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.97461361970287,9.76210119215705,12.769474932063,11.4681839138014,9.98361463831671,10.6184849029766,0,0,0,0,0,4.21501415226193,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6137086367454,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0,0,0,0,0,0,0,0,0,0,0,13.7450541706423,11.3357261060468,12.4514410064578,16.4093091392604,0.756215088665154,10.5119023745611,11.4647708398614,29.9815782544224,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2787766312719,17.9647962681185,13.0212681795746,11.7319248858728,4.37579847214576,0,0,0,0,0,1.00885116665647,0,0,0,0,0,13.4580071294127,9.66859771373882,0,0,0,6.91308595630408,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79055697645231,0,0,0.219881033490858,0,0,0,0,0,0,13.3489757638163,11.2877632124293,23.6687207446704,0,0,0.0644578879735772,0,0,0,0,0,0,21.0709187232633,0,12.1024852539828,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0,0,0,39.8001330940214,22.6518260937551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@LPPR1 | |||
}} |
Revision as of 02:31, 23 January 2014
Short description: | p2@LPPR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LPPR1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000463206_5end |
EntrezGene: | LPPR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data