FFCP PHASE1:Mm9::chr5:34338658..34338679,+: Difference between revisions
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{{FFCP|EntrezGene=269642|HGNC=|MCL_coexpression_id=1|UniProt=Q3UGX3|association_with_transcript=25bp_to_ENSMUST00000056355,NM_001001985,uc008xbs.1_5end|description=CAGE_peak_1_at_Nat8l_5end|id=chr5:34338658..34338679,+|ontology_enrichment_celltype=CL:0000540!1.67e-15!33;CL:0000047!1.67e-15!33;CL:0000031!1.67e-15!33;CL:0000404!1.67e-15!33;CL:0000117!1.73e-13!23;CL:0000337!1.73e-13!23;CL:0000221!3.57e-13!44;CL:0000133!3.57e-13!44;CL:0002319!6.80e-13!43;CL:0000393!2.10e-10!39;CL:0000211!2.10e-10!39;CL:0000055!1.61e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.73e-24,23;CL:0000337,2.73e-24,23;CL:0000540,2.89e-21,33;CL:0000047,2.89e-21,33;CL:0000031,2.89e-21,33;CL:0000404,2.89e-21,33;CL:0000393,8.31e-17,39;CL:0000211,8.31e-17,39;CL:0002319,7.04e-16,43;CL:0000221,2.43e-15,44;CL:0000133,2.43e-15,44;CL:0002321,1.17e-07,70;CL:0002609,2.39e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.94e-32!73;UBERON:0005743!1.94e-32!73;UBERON:0000073!1.91e-31!75;UBERON:0001016!1.91e-31!75;UBERON:0001049!5.91e-26!52;UBERON:0005068!5.91e-26!52;UBERON:0006241!5.91e-26!52;UBERON:0007135!5.91e-26!52;UBERON:0002346!1.16e-25!71;UBERON:0003075!1.16e-25!71;UBERON:0007284!1.16e-25!71;UBERON:0000033!2.26e-25!63;UBERON:0000955!3.99e-25!50;UBERON:0006238!3.99e-25!50;UBERON:0004121!4.49e-25!102;UBERON:0000924!4.49e-25!102;UBERON:0006601!4.49e-25!102;UBERON:0002616!2.34e-24!49;UBERON:0003056!2.43e-22!49;UBERON:0003080!3.38e-20!40;UBERON:0002020!1.22e-19!34;UBERON:0002780!2.06e-19!39;UBERON:0001890!2.06e-19!39;UBERON:0006240!2.06e-19!39;UBERON:0007811!1.29e-17!86;UBERON:0002791!9.37e-17!29;UBERON:0003528!9.37e-17!29;UBERON:0001893!9.37e-17!29;UBERON:0000153!3.72e-15!94;UBERON:0000956!3.39e-12!21;UBERON:0001869!3.39e-12!21;UBERON:0000203!3.39e-12!21;UBERON:0002619!5.80e-10!17;UBERON:0002021!9.11e-08!10;UBERON:0000411!9.11e-08!10;UBERON:0001950!9.11e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.07e-44,73;UBERON:0000073,3.28e-43,54;UBERON:0001016,4.16e-43,75;UBERON:0001049,3.04e-40,52;UBERON:0005068,3.04e-40,52;UBERON:0006241,3.04e-40,52;UBERON:0007135,3.04e-40,52;UBERON:0002346,8.50e-37,64;UBERON:0003075,8.50e-37,64;UBERON:0007284,8.50e-37,64;UBERON:0002020,1.50e-36,34;UBERON:0004121,5.07e-35,95;UBERON:0000924,5.07e-35,95;UBERON:0006601,5.07e-35,95;UBERON:0000955,3.87e-34,47;UBERON:0006238,3.87e-34,47;UBERON:0002616,1.04e-32,46;UBERON:0003528,1.19e-30,29;UBERON:0002791,1.19e-30,29;UBERON:0001893,1.19e-30,29;UBERON:0010371,1.36e-30,73;UBERON:0003080,1.79e-29,40;UBERON:0002780,5.44e-28,39;UBERON:0001890,5.44e-28,39;UBERON:0006240,5.44e-28,39;UBERON:0003056,8.51e-27,49;UBERON:0010314,1.24e-22,92;UBERON:0000956,2.27e-21,21;UBERON:0001869,2.27e-21,21;UBERON:0000203,2.27e-21,21;UBERON:0002619,7.57e-17,17;UBERON:0002021,3.13e-14,10;UBERON:0000411,3.13e-14,10;UBERON:0001950,3.13e-14,10;UBERON:0000025,2.16e-12,114;UBERON:0004111,3.50e-12,122;UBERON:0003076,1.17e-10,12;UBERON:0003057,1.17e-10,12;UBERON:0002420,3.03e-10,8;UBERON:0007245,3.03e-10,8;UBERON:0010009,3.03e-10,8;UBERON:0010011,3.03e-10,8;UBERON:0000454,3.03e-10,8;UBERON:0011216,7.20e-09,194;UBERON:0002240,2.30e-08,6;UBERON:0005174,2.30e-08,6;UBERON:0001137,2.30e-08,6;UBERON:0000369,6.53e-07,5;UBERON:0002435,6.53e-07,5;UBERON:0000204,6.53e-07,5;UBERON:0010082,6.53e-07,5;UBERON:0001948,7.15e-07,5;UBERON:0002315,7.15e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,2.21112554392781,0.297872853602656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0.588231488031014,0.683045484958446,1.45653105909346,0,0,0,0,0.65407546914134,0.439372365468944,0.194429899074283,0.139986421625363,0,0.167782606057736,0,0,0,0,0,4.24864567805155,0.528990979272033,5.07065122804943,0,0,0.899899717281399,0,1.4209602298922,0.299600110518405,2.68952813725088,3.83651565541367,3.64516033495565,4.6271491497304,5.42736870367227,5.30084498283872,3.42974237801871,3.45043695665651,4.5960939330501,13.2139057199266,11.7472351038373,13.0565553267807,3.69281605644543,4.29991924931325,4.68822033501084,9.77140496504833,3.37657566019008,8.25110537994775,5.00868595305235,3.41692033917847,5.59198337475902,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0.432982082022428,1.52015919285059,0.505524445014783,0.34255163915718,0,0,0,0,0.461230994512117,0.452167921657868,0.117588707135705,0,0,0.433798070759735,0,0,0,0,0,3.51336956413857,5.02672096352292,0,0.11981512450592,0,0.381210681219194,16.3271796951257,10.0650132620098,5.02617408451458,13.3844726548053,12.7857728665165,10.1816141834184,8.59878694259116,0.305518091550949,0.373220911830279,0,0.420883711772948,0.780722657776222,1.37941262660084,1.0803727788321,0.452114453507145,0.884474488967262,1.2811372028485,0.655912071918102,0.258703370739016,0,0.189106080167819,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0.199034266818493,0.702213187313235,0.51469581422943,0,0.20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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:269642 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3UGX3 | |||
|association_with_transcript=25bp_to_ENSMUST00000056355,NM_001001985,uc008xbs.1_5end | |||
|cluster_id=chr5:34338658..34338679,+ | |||
|description=CAGE_peak_1_at_Nat8l_5end | |||
|id=chr5:34338658..34338679,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.67e-15!33;CL:0000047!1.67e-15!33;CL:0000031!1.67e-15!33;CL:0000404!1.67e-15!33;CL:0000117!1.73e-13!23;CL:0000337!1.73e-13!23;CL:0000221!3.57e-13!44;CL:0000133!3.57e-13!44;CL:0002319!6.80e-13!43;CL:0000393!2.10e-10!39;CL:0000211!2.10e-10!39;CL:0000055!1.61e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.73e-24,23;CL:0000337,2.73e-24,23;CL:0000540,2.89e-21,33;CL:0000047,2.89e-21,33;CL:0000031,2.89e-21,33;CL:0000404,2.89e-21,33;CL:0000393,8.31e-17,39;CL:0000211,8.31e-17,39;CL:0002319,7.04e-16,43;CL:0000221,2.43e-15,44;CL:0000133,2.43e-15,44;CL:0002321,1.17e-07,70;CL:0002609,2.39e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.94e-32!73;UBERON:0005743!1.94e-32!73;UBERON:0000073!1.91e-31!75;UBERON:0001016!1.91e-31!75;UBERON:0001049!5.91e-26!52;UBERON:0005068!5.91e-26!52;UBERON:0006241!5.91e-26!52;UBERON:0007135!5.91e-26!52;UBERON:0002346!1.16e-25!71;UBERON:0003075!1.16e-25!71;UBERON:0007284!1.16e-25!71;UBERON:0000033!2.26e-25!63;UBERON:0000955!3.99e-25!50;UBERON:0006238!3.99e-25!50;UBERON:0004121!4.49e-25!102;UBERON:0000924!4.49e-25!102;UBERON:0006601!4.49e-25!102;UBERON:0002616!2.34e-24!49;UBERON:0003056!2.43e-22!49;UBERON:0003080!3.38e-20!40;UBERON:0002020!1.22e-19!34;UBERON:0002780!2.06e-19!39;UBERON:0001890!2.06e-19!39;UBERON:0006240!2.06e-19!39;UBERON:0007811!1.29e-17!86;UBERON:0002791!9.37e-17!29;UBERON:0003528!9.37e-17!29;UBERON:0001893!9.37e-17!29;UBERON:0000153!3.72e-15!94;UBERON:0000956!3.39e-12!21;UBERON:0001869!3.39e-12!21;UBERON:0000203!3.39e-12!21;UBERON:0002619!5.80e-10!17;UBERON:0002021!9.11e-08!10;UBERON:0000411!9.11e-08!10;UBERON:0001950!9.11e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.07e-44,73;UBERON:0000073,3.28e-43,54;UBERON:0001016,4.16e-43,75;UBERON:0001049,3.04e-40,52;UBERON:0005068,3.04e-40,52;UBERON:0006241,3.04e-40,52;UBERON:0007135,3.04e-40,52;UBERON:0002346,8.50e-37,64;UBERON:0003075,8.50e-37,64;UBERON:0007284,8.50e-37,64;UBERON:0002020,1.50e-36,34;UBERON:0004121,5.07e-35,95;UBERON:0000924,5.07e-35,95;UBERON:0006601,5.07e-35,95;UBERON:0000955,3.87e-34,47;UBERON:0006238,3.87e-34,47;UBERON:0002616,1.04e-32,46;UBERON:0003528,1.19e-30,29;UBERON:0002791,1.19e-30,29;UBERON:0001893,1.19e-30,29;UBERON:0010371,1.36e-30,73;UBERON:0003080,1.79e-29,40;UBERON:0002780,5.44e-28,39;UBERON:0001890,5.44e-28,39;UBERON:0006240,5.44e-28,39;UBERON:0003056,8.51e-27,49;UBERON:0010314,1.24e-22,92;UBERON:0000956,2.27e-21,21;UBERON:0001869,2.27e-21,21;UBERON:0000203,2.27e-21,21;UBERON:0002619,7.57e-17,17;UBERON:0002021,3.13e-14,10;UBERON:0000411,3.13e-14,10;UBERON:0001950,3.13e-14,10;UBERON:0000025,2.16e-12,114;UBERON:0004111,3.50e-12,122;UBERON:0003076,1.17e-10,12;UBERON:0003057,1.17e-10,12;UBERON:0002420,3.03e-10,8;UBERON:0007245,3.03e-10,8;UBERON:0010009,3.03e-10,8;UBERON:0010011,3.03e-10,8;UBERON:0000454,3.03e-10,8;UBERON:0011216,7.20e-09,194;UBERON:0002240,2.30e-08,6;UBERON:0005174,2.30e-08,6;UBERON:0001137,2.30e-08,6;UBERON:0000369,6.53e-07,5;UBERON:0002435,6.53e-07,5;UBERON:0000204,6.53e-07,5;UBERON:0010082,6.53e-07,5;UBERON:0001948,7.15e-07,5;UBERON:0002315,7.15e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,2.21112554392781,0.297872853602656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0.588231488031014,0.683045484958446,1.45653105909346,0,0,0,0,0.65407546914134,0.439372365468944,0.194429899074283,0.139986421625363,0,0.167782606057736,0,0,0,0,0,4.24864567805155,0.528990979272033,5.07065122804943,0,0,0.899899717281399,0,1.4209602298922,0.299600110518405,2.68952813725088,3.83651565541367,3.64516033495565,4.6271491497304,5.42736870367227,5.30084498283872,3.42974237801871,3.45043695665651,4.5960939330501,13.2139057199266,11.7472351038373,13.0565553267807,3.69281605644543,4.29991924931325,4.68822033501084,9.77140496504833,3.37657566019008,8.25110537994775,5.00868595305235,3.41692033917847,5.59198337475902,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0.432982082022428,1.52015919285059,0.505524445014783,0.34255163915718,0,0,0,0,0.461230994512117,0.452167921657868,0.117588707135705,0,0,0.433798070759735,0,0,0,0,0,3.51336956413857,5.02672096352292,0,0.11981512450592,0,0.381210681219194,16.3271796951257,10.0650132620098,5.02617408451458,13.3844726548053,12.7857728665165,10.1816141834184,8.59878694259116,0.305518091550949,0.373220911830279,0,0.420883711772948,0.780722657776222,1.37941262660084,1.0803727788321,0.452114453507145,0.884474488967262,1.2811372028485,0.655912071918102,0.258703370739016,0,0.189106080167819,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0.199034266818493,0.702213187313235,0.51469581422943,0,0.207125772535502,0.703578179943289,0,1.18372367792605,0.393528463494808,0.308534225774757,0,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0,13.0379768109759,5.9684675179985,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0.38992817423824,0,0,0,0,0.456994050438915,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0.202860121388503,0,0.50925170356284,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0,0.195133647857799,0,0.44292937929755,0.159454768657487,0.163863314715738,0.345369963731791,0,0,0,0,0,13.9679013289379,15.003095883802,0,0,0.94652465824877,0.780877488593277,1.50796378412959,0.238968797952552,0.891194696329576,0.566153061577665,1.61924280669958,2.04579100537918,1.18586333383957,12.8528526568723,0,0.35613120733451,0.162886959353576,0,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0.900305470156551,0.776152102696527,0.428674070063185,1.06404140185364,0.356737635204141,1.15184314421485,0.608929898229199,0.23467170806371,0,0,0,0.161464426695906,0.180938774784468,0.119372344003136,0,0,20.2113579191456,0.341741761595705,0.412773735926445,0.370389054739423,0,0,0,0.509935289981566,0,0.552799895217695,0,0.474503990371703,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0.299033092087958,0,0.194451188344048,0.516639293910924,0.337912250981556,0.234714477291508,0,1.15345278868282,0.724752362478018,0,0.948033361884535,0.810900861160657,0.205421914329655,0.51968329191118,0,0.198681354781265,0.240390899039938,0.147689527174577,0.302899349844443,0.15241361331,0.100826185136841,0.38983152295901,0.384847366561318,0.233753804363138,0,0.887943813496259,4.03712354742641,0.335769232728157,0.19318959403219,0.187682475451182,0,1.07184189539533,1.00314420807073,6.21227026878773,8.74617949363636,5.72895513439397,8.42080593484069,10.9613203163303,11.3309084608455,8.77529250301348,11.7083512838297,8.60970577069989,12.9440077937955,0.62272408550506,1.19707462020309,0.341467211508268,0.243106717068294,0.838452650511929,0.551530525350042,0.222246727801615,0.824140228955577,0.64183841918363,0.252697211763798,1.2673964994512,0.377252682772152,0.37456602987953,0.320125762024346,0.459483751644906,0,0.811190281613988,0.578727661391115,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0.476872379894642,0.726732083161643,0.376437521661322,0.338458431566706,0,0,0.543216455383447,0,1.06771516311757,0.394017929502254,0.409231043169689,0.154936841185966,0.192906610981141,1.99848462350357,0.233931608445408,0.214871054048298,0.191288332068843,0.661774257358546,0 | |||
|short_description=p1@Nat8l | |||
}} |
Revision as of 08:08, 4 August 2015
Short description: | p1@Nat8l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nat8l_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 25bp_to_ENSMUST00000056355, NM_001001985, uc008xbs.1_5end |
EntrezGene: | 269642 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.73e-24 | 23 |
neuroblast (sensu Vertebrata) | 2.73e-24 | 23 |
neuron | 2.89e-21 | 33 |
neuronal stem cell | 2.89e-21 | 33 |
neuroblast | 2.89e-21 | 33 |
electrically signaling cell | 2.89e-21 | 33 |
electrically responsive cell | 8.31e-17 | 39 |
electrically active cell | 8.31e-17 | 39 |
neural cell | 7.04e-16 | 43 |
ectodermal cell | 2.43e-15 | 44 |
neurectodermal cell | 2.43e-15 | 44 |
embryonic cell | 1.17e-07 | 70 |
neuron of cerebral cortex | 2.39e-07 | 6 |