FFCP PHASE1:Mm9::chr7:130644017..130644092,-: Difference between revisions
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{{FFCP|EntrezGene=210162|HGNC=|MCL_coexpression_id=13|UniProt=G3X952,G3UZ80,Q8BI51|association_with_transcript=-54bp_to_ENSMUST00000042470,ENSMUST00000128217,NM_001081329,uc009jps.1,uc009jpt.1_5end|description=CAGE_peak_1_at_Zkscan2_5end|id=chr7:130644017..130644092,-|ontology_enrichment_celltype=CL:0000540!7.77e-19!33;CL:0000047!7.77e-19!33;CL:0000031!7.77e-19!33;CL:0000404!7.77e-19!33;CL:0000117!4.58e-15!23;CL:0000337!4.58e-15!23;CL:0000393!7.86e-13!39;CL:0000211!7.86e-13!39;CL:0000221!2.53e-12!44;CL:0000133!2.53e-12!44;CL:0002319!5.58e-12!43;CL:0000055!9.31e-08!50|ontology_enrichment_celltype_v019_2=CL:0000540,6.58e-21,33;CL:0000047,6.58e-21,33;CL:0000031,6.58e-21,33;CL:0000404,6.58e-21,33;CL:0000117,1.10e-16,23;CL:0000337,1.10e-16,23;CL:0000393,5.39e-15,39;CL:0000211,5.39e-15,39;CL:0000221,1.53e-13,44;CL:0000133,1.53e-13,44;CL:0002319,3.73e-13,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.02e-28!73;UBERON:0005743!3.02e-28!73;UBERON:0000073!1.36e-27!75;UBERON:0001016!1.36e-27!75;UBERON:0002346!2.75e-27!71;UBERON:0003075!2.75e-27!71;UBERON:0007284!2.75e-27!71;UBERON:0004121!1.33e-26!102;UBERON:0000924!1.33e-26!102;UBERON:0006601!1.33e-26!102;UBERON:0000033!3.33e-24!63;UBERON:0003056!1.03e-22!49;UBERON:0001049!1.42e-21!52;UBERON:0005068!1.42e-21!52;UBERON:0006241!1.42e-21!52;UBERON:0007135!1.42e-21!52;UBERON:0000955!5.25e-20!50;UBERON:0006238!5.25e-20!50;UBERON:0002616!2.71e-19!49;UBERON:0003080!4.58e-18!40;UBERON:0002780!1.78e-17!39;UBERON:0001890!1.78e-17!39;UBERON:0006240!1.78e-17!39;UBERON:0002020!1.30e-16!34;UBERON:0002791!2.72e-13!29;UBERON:0003528!2.72e-13!29;UBERON:0001893!2.72e-13!29;UBERON:0000153!5.52e-12!94;UBERON:0007811!2.03e-11!86;UBERON:0000956!1.48e-08!21;UBERON:0001869!1.48e-08!21;UBERON:0000203!1.48e-08!21;UBERON:0000468!4.60e-08!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.07e-31,73;UBERON:0002346,3.70e-31,64;UBERON:0003075,3.70e-31,64;UBERON:0007284,3.70e-31,64;UBERON:0001016,1.24e-30,75;UBERON:0004121,1.06e-29,95;UBERON:0000924,1.06e-29,95;UBERON:0006601,1.06e-29,95;UBERON:0010371,1.83e-26,73;UBERON:0000073,1.03e-25,54;UBERON:0003056,3.60e-25,49;UBERON:0001049,2.33e-24,52;UBERON:0005068,2.33e-24,52;UBERON:0006241,2.33e-24,52;UBERON:0007135,2.33e-24,52;UBERON:0010314,4.92e-23,92;UBERON:0000955,6.87e-21,47;UBERON:0006238,6.87e-21,47;UBERON:0002616,4.22e-20,46;UBERON:0003080,5.78e-20,40;UBERON:0002780,2.63e-19,39;UBERON:0001890,2.63e-19,39;UBERON:0006240,2.63e-19,39;UBERON:0002020,2.48e-18,34;UBERON:0003528,1.28e-14,29;UBERON:0002791,1.28e-14,29;UBERON:0001893,1.28e-14,29;UBERON:0000956,2.52e-09,21;UBERON:0001869,2.52e-09,21;UBERON:0000203,2.52e-09,21;UBERON:0002619,3.58e-07,17;UBERON:0002420,8.32e-07,8;UBERON:0007245,8.32e-07,8;UBERON:0010009,8.32e-07,8;UBERON:0010011,8.32e-07,8;UBERON:0000454,8.32e-07,8|phase1_expression=4.48416771893423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48677489619386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,14.1621522601718,17.4567023159771,12.6766280701236,0,0.889294796111139,0,0,0,0.898800331555214,1.15265491596466,10.4726508431562,7.42532660824299,7.99234853135252,10.5690864229407,12.1477697523387,11.7591167246356,11.6931474642248,12.8690630125403,8.8092704799511,6.2566795661742,7.37311359629969,19.2553980086083,15.3699241252048,19.7947080811569,6.42120897703176,12.9435400307286,8.86229837105499,18.8562294703147,12.5287079103211,22.5543329448614,0.227178579999552,1.28471652181535,0.869593466105033,0,0,0,0,0,0.421333260395256,0,0,0,5.35204995151386,0,0,0,0,0,0,0.34255163915718,0,1.33597925158342,3.64319186208885,3.04465478312141,2.07553947530453,1.50722640552623,2.3517741427141,0.628332956648377,0,0.144599356919912,1.76922110389975,0.323533699894818,0,0,0,4.09893115816166,7.54008144528438,0,0,0,0,9.28701964309901,7.32000964509802,24.6282530141214,7.82209440865244,12.2743419518559,6.02585329222724,11.1946471516753,2.44414473240759,0.124406970610093,0,3.99839526184301,5.20481771850815,8.73627996847197,5.40186389416048,7.23383125611432,12.7228253412983,12.2989171473456,12.4623293664439,10.0894314588216,2.37124792226126,5.8622884852024,4.22282697993477,3.72632745126877,3.33656699070717,1.0447564995665,1.23469281844766,5.17489093728082,0,0,0,2.27838349789052,2.57978665979206,1.80062061461015,1.65721314909647,2.55793501271625,2.1597395804233,1.39520366850245,0.804820204198858,1.05088808130453,0.822799249567402,0.492502392237286,0.324275238183423,0,0.219550115291051,0.402619256281115,5.46753866266731,10.496270462687,0,0.264450566663544,5.54549451391608,4.18026009348789,1.28867461322093,1.81515172161008,1.33426826306922,1.33157938278791,0,0.658795818896044,0.754005626400808,0.795825888164603,0.58489226135736,0,0,0.199141273254367,2.65535061334314,3.99869794134051,4.50830942692322,3.05476991767971,1.35766741017338,2.59502533594179,1.45444035385792,0,0.156998727841375,0,0,1.00107063429656,0.982794975566015,0.449724224769707,0,0.482354319504834,0,0.863088412352432,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0,0.358794827043824,0,0.369506380333209,2.4633883530163,2.28150967018836,1.18821560042632,0.938760993154008,1.34005005953453,0.476087281772027,0.585400943573396,0.157635144106191,0,0,0.327726629431476,0,0.289298117163023,0,0,0,0,7.38532713943843,9.02529986759964,0,0,5.67914794949262,3.90438744296638,6.46270193198397,6.4521575447189,7.35235624471901,11.6061377623421,6.8817819284732,7.89090816360542,4.74345333535828,14.7807805554031,0.567760340833074,3.20518086601059,4.39794790254655,0.329940245945071,0,3.15614827001476,2.11626489875326,1.13163047853539,0,0.922305443831782,1.29214146584111,1.45413491791002,0.356497378384721,0,0,1.03135543248187,6.12791290356818,6.84232157318979,5.30370603509293,7.71613326113732,5.67488747655275,6.77801506887868,5.26556865926787,5.48036908406279,0.23467170806371,0.21183207086382,0.220528398054962,0,1.13025098687134,0.301564624640779,0,0,0,5.19190845629427,0,2.88941615148511,1.29636169158798,0.188368457004691,0,0,0,0.139951452323658,0.138199973804424,0,4.74503990371703,2.03319467126849,1.62008011232702,1.88179466413022,0.87345025498471,0.944050424693745,0.495920734352016,0,0.129614973291793,0,1.69107881605257,4.18646328923141,2.64733584731356,2.91676782516071,1.16243841129958,0.337912250981556,1.64300134104056,2.21347454234715,5.13810787685983,8.21386010808421,4.89651010638371,0,0.810900861160657,0.821687657318618,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0,0,0.0962118416403295,0,0.906921534460845,0.221985953374065,0,0.167884616364078,0.772758376128762,2.25218970541418,0.73260649706906,0,0,9.60078132449013,8.28585425712918,4.58316410751517,7.21783365843488,6.16574267793578,6.0431511791176,8.10027000278167,9.00642406448441,3.17199686288943,14.497288729051,3.42498247027783,7.58147259461959,6.65861062441123,3.40349403895612,4.19226325255965,3.67687016900028,3.33370091702423,2.88449080134452,2.88827288632634,4.54854981174835,4.56262739802432,4.14977951049368,2.62196220915671,3.52138338226781,4.19278923375977,3.81034953026459,3.82418275618023,4.43691207066522,3.29668720642645,2.35518272215036,2.74295401908332,2.48466128623072,1.43061713968393,2.47088908274958,3.48204707536723,3.89227196301712,3.29270351170991,3.41990624869196,5.02475221229689,1.12228454331548,4.98267076121531,3.25064791839359,2.45538625901814,1.70430525304563,2.89359916471712,2.99772693525535,4.21076895201735,4.08255002691767,2.10417165275728,0.441182838239031,0.463735671240843|short_description=p1@Zkscan2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:210162 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G3X952,uniprot:G3UZ80,uniprot:Q8BI51 | |||
|association_with_transcript=-54bp_to_ENSMUST00000042470,ENSMUST00000128217,NM_001081329,uc009jps.1,uc009jpt.1_5end | |||
|cluster_id=chr7:130644017..130644092,- | |||
|description=CAGE_peak_1_at_Zkscan2_5end | |||
|id=chr7:130644017..130644092,- | |||
|ontology_enrichment_celltype=CL:0000540!7.77e-19!33;CL:0000047!7.77e-19!33;CL:0000031!7.77e-19!33;CL:0000404!7.77e-19!33;CL:0000117!4.58e-15!23;CL:0000337!4.58e-15!23;CL:0000393!7.86e-13!39;CL:0000211!7.86e-13!39;CL:0000221!2.53e-12!44;CL:0000133!2.53e-12!44;CL:0002319!5.58e-12!43;CL:0000055!9.31e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.58e-21,33;CL:0000047,6.58e-21,33;CL:0000031,6.58e-21,33;CL:0000404,6.58e-21,33;CL:0000117,1.10e-16,23;CL:0000337,1.10e-16,23;CL:0000393,5.39e-15,39;CL:0000211,5.39e-15,39;CL:0000221,1.53e-13,44;CL:0000133,1.53e-13,44;CL:0002319,3.73e-13,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.02e-28!73;UBERON:0005743!3.02e-28!73;UBERON:0000073!1.36e-27!75;UBERON:0001016!1.36e-27!75;UBERON:0002346!2.75e-27!71;UBERON:0003075!2.75e-27!71;UBERON:0007284!2.75e-27!71;UBERON:0004121!1.33e-26!102;UBERON:0000924!1.33e-26!102;UBERON:0006601!1.33e-26!102;UBERON:0000033!3.33e-24!63;UBERON:0003056!1.03e-22!49;UBERON:0001049!1.42e-21!52;UBERON:0005068!1.42e-21!52;UBERON:0006241!1.42e-21!52;UBERON:0007135!1.42e-21!52;UBERON:0000955!5.25e-20!50;UBERON:0006238!5.25e-20!50;UBERON:0002616!2.71e-19!49;UBERON:0003080!4.58e-18!40;UBERON:0002780!1.78e-17!39;UBERON:0001890!1.78e-17!39;UBERON:0006240!1.78e-17!39;UBERON:0002020!1.30e-16!34;UBERON:0002791!2.72e-13!29;UBERON:0003528!2.72e-13!29;UBERON:0001893!2.72e-13!29;UBERON:0000153!5.52e-12!94;UBERON:0007811!2.03e-11!86;UBERON:0000956!1.48e-08!21;UBERON:0001869!1.48e-08!21;UBERON:0000203!1.48e-08!21;UBERON:0000468!4.60e-08!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.07e-31,73;UBERON:0002346,3.70e-31,64;UBERON:0003075,3.70e-31,64;UBERON:0007284,3.70e-31,64;UBERON:0001016,1.24e-30,75;UBERON:0004121,1.06e-29,95;UBERON:0000924,1.06e-29,95;UBERON:0006601,1.06e-29,95;UBERON:0010371,1.83e-26,73;UBERON:0000073,1.03e-25,54;UBERON:0003056,3.60e-25,49;UBERON:0001049,2.33e-24,52;UBERON:0005068,2.33e-24,52;UBERON:0006241,2.33e-24,52;UBERON:0007135,2.33e-24,52;UBERON:0010314,4.92e-23,92;UBERON:0000955,6.87e-21,47;UBERON:0006238,6.87e-21,47;UBERON:0002616,4.22e-20,46;UBERON:0003080,5.78e-20,40;UBERON:0002780,2.63e-19,39;UBERON:0001890,2.63e-19,39;UBERON:0006240,2.63e-19,39;UBERON:0002020,2.48e-18,34;UBERON:0003528,1.28e-14,29;UBERON:0002791,1.28e-14,29;UBERON:0001893,1.28e-14,29;UBERON:0000956,2.52e-09,21;UBERON:0001869,2.52e-09,21;UBERON:0000203,2.52e-09,21;UBERON:0002619,3.58e-07,17;UBERON:0002420,8.32e-07,8;UBERON:0007245,8.32e-07,8;UBERON:0010009,8.32e-07,8;UBERON:0010011,8.32e-07,8;UBERON:0000454,8.32e-07,8 | |||
|phase1_expression=4.48416771893423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48677489619386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,14.1621522601718,17.4567023159771,12.6766280701236,0,0.889294796111139,0,0,0,0.898800331555214,1.15265491596466,10.4726508431562,7.42532660824299,7.99234853135252,10.5690864229407,12.1477697523387,11.7591167246356,11.6931474642248,12.8690630125403,8.8092704799511,6.2566795661742,7.37311359629969,19.2553980086083,15.3699241252048,19.7947080811569,6.42120897703176,12.9435400307286,8.86229837105499,18.8562294703147,12.5287079103211,22.5543329448614,0.227178579999552,1.28471652181535,0.869593466105033,0,0,0,0,0,0.421333260395256,0,0,0,5.35204995151386,0,0,0,0,0,0,0.34255163915718,0,1.33597925158342,3.64319186208885,3.04465478312141,2.07553947530453,1.50722640552623,2.3517741427141,0.628332956648377,0,0.144599356919912,1.76922110389975,0.323533699894818,0,0,0,4.09893115816166,7.54008144528438,0,0,0,0,9.28701964309901,7.32000964509802,24.6282530141214,7.82209440865244,12.2743419518559,6.02585329222724,11.1946471516753,2.44414473240759,0.124406970610093,0,3.99839526184301,5.20481771850815,8.73627996847197,5.40186389416048,7.23383125611432,12.7228253412983,12.2989171473456,12.4623293664439,10.0894314588216,2.37124792226126,5.8622884852024,4.22282697993477,3.72632745126877,3.33656699070717,1.0447564995665,1.23469281844766,5.17489093728082,0,0,0,2.27838349789052,2.57978665979206,1.80062061461015,1.65721314909647,2.55793501271625,2.1597395804233,1.39520366850245,0.804820204198858,1.05088808130453,0.822799249567402,0.492502392237286,0.324275238183423,0,0.219550115291051,0.402619256281115,5.46753866266731,10.496270462687,0,0.264450566663544,5.54549451391608,4.18026009348789,1.28867461322093,1.81515172161008,1.33426826306922,1.33157938278791,0,0.658795818896044,0.754005626400808,0.795825888164603,0.58489226135736,0,0,0.199141273254367,2.65535061334314,3.99869794134051,4.50830942692322,3.05476991767971,1.35766741017338,2.59502533594179,1.45444035385792,0,0.156998727841375,0,0,1.00107063429656,0.982794975566015,0.449724224769707,0,0.482354319504834,0,0.863088412352432,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0,0.358794827043824,0,0.369506380333209,2.4633883530163,2.28150967018836,1.18821560042632,0.938760993154008,1.34005005953453,0.476087281772027,0.585400943573396,0.157635144106191,0,0,0.327726629431476,0,0.289298117163023,0,0,0,0,7.38532713943843,9.02529986759964,0,0,5.67914794949262,3.90438744296638,6.46270193198397,6.4521575447189,7.35235624471901,11.6061377623421,6.8817819284732,7.89090816360542,4.74345333535828,14.7807805554031,0.567760340833074,3.20518086601059,4.39794790254655,0.329940245945071,0,3.15614827001476,2.11626489875326,1.13163047853539,0,0.922305443831782,1.29214146584111,1.45413491791002,0.356497378384721,0,0,1.03135543248187,6.12791290356818,6.84232157318979,5.30370603509293,7.71613326113732,5.67488747655275,6.77801506887868,5.26556865926787,5.48036908406279,0.23467170806371,0.21183207086382,0.220528398054962,0,1.13025098687134,0.301564624640779,0,0,0,5.19190845629427,0,2.88941615148511,1.29636169158798,0.188368457004691,0,0,0,0.139951452323658,0.138199973804424,0,4.74503990371703,2.03319467126849,1.62008011232702,1.88179466413022,0.87345025498471,0.944050424693745,0.495920734352016,0,0.129614973291793,0,1.69107881605257,4.18646328923141,2.64733584731356,2.91676782516071,1.16243841129958,0.337912250981556,1.64300134104056,2.21347454234715,5.13810787685983,8.21386010808421,4.89651010638371,0,0.810900861160657,0.821687657318618,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0,0,0.0962118416403295,0,0.906921534460845,0.221985953374065,0,0.167884616364078,0.772758376128762,2.25218970541418,0.73260649706906,0,0,9.60078132449013,8.28585425712918,4.58316410751517,7.21783365843488,6.16574267793578,6.0431511791176,8.10027000278167,9.00642406448441,3.17199686288943,14.497288729051,3.42498247027783,7.58147259461959,6.65861062441123,3.40349403895612,4.19226325255965,3.67687016900028,3.33370091702423,2.88449080134452,2.88827288632634,4.54854981174835,4.56262739802432,4.14977951049368,2.62196220915671,3.52138338226781,4.19278923375977,3.81034953026459,3.82418275618023,4.43691207066522,3.29668720642645,2.35518272215036,2.74295401908332,2.48466128623072,1.43061713968393,2.47088908274958,3.48204707536723,3.89227196301712,3.29270351170991,3.41990624869196,5.02475221229689,1.12228454331548,4.98267076121531,3.25064791839359,2.45538625901814,1.70430525304563,2.89359916471712,2.99772693525535,4.21076895201735,4.08255002691767,2.10417165275728,0.441182838239031,0.463735671240843 | |||
|short_description=p1@Zkscan2 | |||
}} |
Revision as of 04:24, 4 August 2015
Short description: | p1@Zkscan2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zkscan2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -54bp_to_ENSMUST00000042470, ENSMUST00000128217, NM_001081329, uc009jps.1, uc009jpt.1_5end |
EntrezGene: | 210162 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.58e-21 | 33 |
neuronal stem cell | 6.58e-21 | 33 |
neuroblast | 6.58e-21 | 33 |
electrically signaling cell | 6.58e-21 | 33 |
CNS neuron (sensu Vertebrata) | 1.10e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.10e-16 | 23 |
electrically responsive cell | 5.39e-15 | 39 |
electrically active cell | 5.39e-15 | 39 |
ectodermal cell | 1.53e-13 | 44 |
neurectodermal cell | 1.53e-13 | 44 |
neural cell | 3.73e-13 | 43 |